Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952563

Identifier: 195952563

GI number: 195952563

Start: 163878

End: 164294

Strand: Direct

Name: 195952563

Synonym: HY04AAS1_0183

Alternate gene names: NA

Gene position: 163878-164294 (Clockwise)

Preceding gene: 195952562

Following gene: 195952570

Centisome position: 10.51

GC content: 35.01

Gene sequence:

>417_bases
ATGGGTATATTGTTTGATAAGAAAGATTTTTTGTCGTTGGTGGGATACTCCTTTTCTTTGCTTGGAAGGATAAACAAAGA
GCTAAGTCTAGCAGAAAATTTAAGCGTACTAAGAAATATAACGCTCCTTGGTATAAGGTTTGATAAAAAAGACGAGAGCA
TTCTAAAAGCTTTGATAGATTCAACTAGGACATCAGATGCATTTTTTGTGTTTGAAGATTTCCTGGTGCTTTTACTGTTT
GGTACTGATAAAGAAGGGGCTATACACATAGTAAACGAGCTAAAAGAATTTTTTGGACAAAATATGTTTTACACTATGGC
TACATCTCCGGAAGATGGTGATAACGCATCAGCTTTGGTAGAAAACTTTAGGGGTATGGTAAGGCTAAAGCTTTCTTTAG
ATATCTACGCTTTATAG

Upstream 100 bases:

>100_bases
ACGGAGTTAAGCCCCATAGAAAAATACGATGGTAAGTCTTTTTTAGTATTTATTGGTGAGAATATCAAAAAAGAAAATGT
TTTTGTATTATAATTAATGT

Downstream 100 bases:

>100_bases
TATTTTTTATATTTTATTGTTTCGATTACCATACTAGACAAGCCTATTCCCATAACTGTTATTATCACTAAAAAAAATCC
TATATCAAGGTTGTGAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MGILFDKKDFLSLVGYSFSLLGRINKELSLAENLSVLRNITLLGIRFDKKDESILKALIDSTRTSDAFFVFEDFLVLLLF
GTDKEGAIHIVNELKEFFGQNMFYTMATSPEDGDNASALVENFRGMVRLKLSLDIYAL

Sequences:

>Translated_138_residues
MGILFDKKDFLSLVGYSFSLLGRINKELSLAENLSVLRNITLLGIRFDKKDESILKALIDSTRTSDAFFVFEDFLVLLLF
GTDKEGAIHIVNELKEFFGQNMFYTMATSPEDGDNASALVENFRGMVRLKLSLDIYAL
>Mature_137_residues
GILFDKKDFLSLVGYSFSLLGRINKELSLAENLSVLRNITLLGIRFDKKDESILKALIDSTRTSDAFFVFEDFLVLLLFG
TDKEGAIHIVNELKEFFGQNMFYTMATSPEDGDNASALVENFRGMVRLKLSLDIYAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15587; Mature: 15456

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILFDKKDFLSLVGYSFSLLGRINKELSLAENLSVLRNITLLGIRFDKKDESILKALID
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHH
STRTSDAFFVFEDFLVLLLFGTDKEGAIHIVNELKEFFGQNMFYTMATSPEDGDNASALV
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH
ENFRGMVRLKLSLDIYAL
HHHHCEEEEEEEEEEEEC
>Mature Secondary Structure 
GILFDKKDFLSLVGYSFSLLGRINKELSLAENLSVLRNITLLGIRFDKKDESILKALID
CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHH
STRTSDAFFVFEDFLVLLLFGTDKEGAIHIVNELKEFFGQNMFYTMATSPEDGDNASALV
CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH
ENFRGMVRLKLSLDIYAL
HHHHCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA