Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952548

Identifier: 195952548

GI number: 195952548

Start: 151581

End: 153419

Strand: Direct

Name: 195952548

Synonym: HY04AAS1_0168

Alternate gene names: NA

Gene position: 151581-153419 (Clockwise)

Preceding gene: 195952547

Following gene: 195952549

Centisome position: 9.72

GC content: 32.41

Gene sequence:

>1839_bases
ATGAAGCTTTTTATAAAGAAGCTTTTTATACTTTTTGTATTTATACTTGTTTTGTTGGCGGCTTCTGGTATAAAATCCTT
TGGCGTAGGCTCAAGTTTAAACGCTTATTTAGAAAGAAAGCTAAATCACGCTATAGAGCTTATACATCTAAGGGACTACC
AAGACGCTATCTCAGAGTTTATGGATGTGTACTCTATGGCTCCAAAAAGTAAATACGGTGAGCTTTCTTATCTTTACATA
GCAAAGGCTTACGCTTACGAAAACTACTACAGCGCAAATATAAAAGGTGTTCAGAATGCTATAGTTATGCTAAACATGTA
CCCATTTTATTATAAGGTCCCTTCTTATATAGCTCTACAAAGAGAAATAATAGGTGATATATATCTTCTTTTGGGAGATT
TCAACAAAGCTGGTGGTGTTTTTATGGTTTTATCAAGCAAACACCCAAATGTAAATAAGTATAAAATCAAGTTAGCCTAT
GCAACCCTTAGAAACCACGATAAAAGCGGTATAGATTATATTAAAAGCATTCAAAACAAAGATATAAAAACCCCAGAAGA
TACGGCTCTTTATTATTTTGATTACGGCATATACTATTTTTTGACTGGAGATTATAAAAACACTACCTTCATGCTTCATG
AAGCTTCTAACTACGATAGTTTTTTGTCTTATCACCCCTATTACGAGTTTCTTTATGGATACGCTTTTTATAAGTTATCA
GATTGGCAAGATGCCATGTTTCACCTTGAGCTTTCAAAAAGAAGGGATATATATGGAAGGTATAAAAACAAGGTAAATTA
TATACTGATGCACATATATCTTATTACAAAAGACTATCTTGATGCTCATAGGATTTTAAAAGAATTTTTAAAGCATGACG
GTGTTTTCTACAATCCAGTTGCCTATATATCGCTTAGTTCTTTATGGATGCACCCTGGTTATTTGGCTACTTACAAGATA
CCGTTTTATCAAAATACCTTAGATAAGCTTATGTGGCTTCATTTTCCAAGCGTTTTATCTTTGTATCCAGATTTTGGCCT
TCTCAACTACTACCTTGAAGGCGGACTTAATTCCGAAGAGATCCAAGATATGTTTATAGGCTTTTTAAACATAAAATTTC
CAAAAAAAACCATAAATTTTGATGATATTAATGTATCATTTGAAAAGCCTGTAAACTATATATCAAACCTTATATCAAGA
GAAAACCCCTACAATGAAACCTTTGCCTATAGGCTTTATAGCGTTTACAAAGAAGACCCCTCTTTATTTGCAATGTTTAT
ACAGCCAAGCACTTATGAGAACATATCAAGAGTTTTTGTGTATGTAGGTGATACCAATGGACTTGGATTTACAAGTGGCA
CCCAAGATCAAAATATAAAGACGTTTCTACAAGGAGAGTTTTATATAGAACAAGGCGATATAAAAGACGGCATAACCGAC
TTAAATTCTGTTTTAAACAATTTAAAAGGCGACGATAAAGAAGAGGCAGAATTCCTAATAGGCTATTACAACAATGACGA
TGCTATGTTAGATAGATTTTTGTCTCATAAAAATATTTACGCCTCTAATAGATTAAAAGACTATGCTAAGCTTGGACTTT
TAAAAGACGGCATATTAAAGTTAAACAAAAAAGATTATCAAAATGCTTTAAAATATTTTGAAACCTATATAGAGATTTAC
AATAAAACAAAAGATGACACATATTGGTGGGCTTTATATAAAGCTGCCTACATTAGCCACTTGCTAAAAGACAAAAATGA
GTTAAAATATATATTAGGTTTGGCTAAAAATAGCCAAAACCTTTGGGCGAAGGCTGCTATTATTTTGTGGGGTGAATAG

Upstream 100 bases:

>100_bases
AGCCTCTCCAAAGCGCAGAGAGCGGCTTGGAAGCACACTTTAAGTATAGGTGTTAGAAATATAATAAGCGCATTAAACCG
TAAAGTTTTAAAATAGATTC

Downstream 100 bases:

>100_bases
TTATGGGGCTTTTTAATGGCGTAGATGAAGTAGTTCCTTATTTGGATTATACTTGGTTAAAGCATAAGGTTATACTTAGT
AATTTAGCAAATGCAGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 612

Protein sequence:

>612_residues
MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEFMDVYSMAPKSKYGELSYLYI
AKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQREIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAY
ATLRNHDKSGIDYIKSIQNKDIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS
DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPVAYISLSSLWMHPGYLATYKI
PFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEEIQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISR
ENPYNETFAYRLYSVYKEDPSLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD
LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILKLNKKDYQNALKYFETYIEIY
NKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQNLWAKAAIILWGE

Sequences:

>Translated_612_residues
MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEFMDVYSMAPKSKYGELSYLYI
AKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQREIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAY
ATLRNHDKSGIDYIKSIQNKDIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS
DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPVAYISLSSLWMHPGYLATYKI
PFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEEIQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISR
ENPYNETFAYRLYSVYKEDPSLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD
LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILKLNKKDYQNALKYFETYIEIY
NKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQNLWAKAAIILWGE
>Mature_612_residues
MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEFMDVYSMAPKSKYGELSYLYI
AKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQREIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAY
ATLRNHDKSGIDYIKSIQNKDIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS
DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPVAYISLSSLWMHPGYLATYKI
PFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEEIQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISR
ENPYNETFAYRLYSVYKEDPSLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD
LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILKLNKKDYQNALKYFETYIEIY
NKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQNLWAKAAIILWGE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71791; Mature: 71791

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEF
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHHHH
MDVYSMAPKSKYGELSYLYIAKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQ
HHHHHCCCCCCCCCEEEEEEEEHHHHCCEEECCCCCCCCEEEEEEECCCEEECCHHHHHH
REIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAYATLRNHDKSGIDYIKSIQNK
HHHHHHHEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEHHCCCCCHHHHHHHHCCC
DIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS
CCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCHHHHCCHHHHHHHHHHEEEEC
DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPV
CCHHHHEEEEHHHCCHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEECCH
AYISLSSLWMHPGYLATYKIPFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEE
HEEEEHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH
IQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISRENPYNETFAYRLYSVYKEDP
HHHHHHHHHEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
SLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD
CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHH
LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILK
HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LNKKDYQNALKYFETYIEIYNKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQN
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCC
LWAKAAIILWGE
CEEEEEEEEECC
>Mature Secondary Structure
MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEF
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHHHH
MDVYSMAPKSKYGELSYLYIAKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQ
HHHHHCCCCCCCCCEEEEEEEEHHHHCCEEECCCCCCCCEEEEEEECCCEEECCHHHHHH
REIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAYATLRNHDKSGIDYIKSIQNK
HHHHHHHEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEHHCCCCCHHHHHHHHCCC
DIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS
CCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCHHHHCCHHHHHHHHHHEEEEC
DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPV
CCHHHHEEEEHHHCCHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEECCH
AYISLSSLWMHPGYLATYKIPFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEE
HEEEEHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH
IQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISRENPYNETFAYRLYSVYKEDP
HHHHHHHHHEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
SLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD
CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHH
LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILK
HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LNKKDYQNALKYFETYIEIYNKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQN
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCC
LWAKAAIILWGE
CEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA