| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952548
Identifier: 195952548
GI number: 195952548
Start: 151581
End: 153419
Strand: Direct
Name: 195952548
Synonym: HY04AAS1_0168
Alternate gene names: NA
Gene position: 151581-153419 (Clockwise)
Preceding gene: 195952547
Following gene: 195952549
Centisome position: 9.72
GC content: 32.41
Gene sequence:
>1839_bases ATGAAGCTTTTTATAAAGAAGCTTTTTATACTTTTTGTATTTATACTTGTTTTGTTGGCGGCTTCTGGTATAAAATCCTT TGGCGTAGGCTCAAGTTTAAACGCTTATTTAGAAAGAAAGCTAAATCACGCTATAGAGCTTATACATCTAAGGGACTACC AAGACGCTATCTCAGAGTTTATGGATGTGTACTCTATGGCTCCAAAAAGTAAATACGGTGAGCTTTCTTATCTTTACATA GCAAAGGCTTACGCTTACGAAAACTACTACAGCGCAAATATAAAAGGTGTTCAGAATGCTATAGTTATGCTAAACATGTA CCCATTTTATTATAAGGTCCCTTCTTATATAGCTCTACAAAGAGAAATAATAGGTGATATATATCTTCTTTTGGGAGATT TCAACAAAGCTGGTGGTGTTTTTATGGTTTTATCAAGCAAACACCCAAATGTAAATAAGTATAAAATCAAGTTAGCCTAT GCAACCCTTAGAAACCACGATAAAAGCGGTATAGATTATATTAAAAGCATTCAAAACAAAGATATAAAAACCCCAGAAGA TACGGCTCTTTATTATTTTGATTACGGCATATACTATTTTTTGACTGGAGATTATAAAAACACTACCTTCATGCTTCATG AAGCTTCTAACTACGATAGTTTTTTGTCTTATCACCCCTATTACGAGTTTCTTTATGGATACGCTTTTTATAAGTTATCA GATTGGCAAGATGCCATGTTTCACCTTGAGCTTTCAAAAAGAAGGGATATATATGGAAGGTATAAAAACAAGGTAAATTA TATACTGATGCACATATATCTTATTACAAAAGACTATCTTGATGCTCATAGGATTTTAAAAGAATTTTTAAAGCATGACG GTGTTTTCTACAATCCAGTTGCCTATATATCGCTTAGTTCTTTATGGATGCACCCTGGTTATTTGGCTACTTACAAGATA CCGTTTTATCAAAATACCTTAGATAAGCTTATGTGGCTTCATTTTCCAAGCGTTTTATCTTTGTATCCAGATTTTGGCCT TCTCAACTACTACCTTGAAGGCGGACTTAATTCCGAAGAGATCCAAGATATGTTTATAGGCTTTTTAAACATAAAATTTC CAAAAAAAACCATAAATTTTGATGATATTAATGTATCATTTGAAAAGCCTGTAAACTATATATCAAACCTTATATCAAGA GAAAACCCCTACAATGAAACCTTTGCCTATAGGCTTTATAGCGTTTACAAAGAAGACCCCTCTTTATTTGCAATGTTTAT ACAGCCAAGCACTTATGAGAACATATCAAGAGTTTTTGTGTATGTAGGTGATACCAATGGACTTGGATTTACAAGTGGCA CCCAAGATCAAAATATAAAGACGTTTCTACAAGGAGAGTTTTATATAGAACAAGGCGATATAAAAGACGGCATAACCGAC TTAAATTCTGTTTTAAACAATTTAAAAGGCGACGATAAAGAAGAGGCAGAATTCCTAATAGGCTATTACAACAATGACGA TGCTATGTTAGATAGATTTTTGTCTCATAAAAATATTTACGCCTCTAATAGATTAAAAGACTATGCTAAGCTTGGACTTT TAAAAGACGGCATATTAAAGTTAAACAAAAAAGATTATCAAAATGCTTTAAAATATTTTGAAACCTATATAGAGATTTAC AATAAAACAAAAGATGACACATATTGGTGGGCTTTATATAAAGCTGCCTACATTAGCCACTTGCTAAAAGACAAAAATGA GTTAAAATATATATTAGGTTTGGCTAAAAATAGCCAAAACCTTTGGGCGAAGGCTGCTATTATTTTGTGGGGTGAATAG
Upstream 100 bases:
>100_bases AGCCTCTCCAAAGCGCAGAGAGCGGCTTGGAAGCACACTTTAAGTATAGGTGTTAGAAATATAATAAGCGCATTAAACCG TAAAGTTTTAAAATAGATTC
Downstream 100 bases:
>100_bases TTATGGGGCTTTTTAATGGCGTAGATGAAGTAGTTCCTTATTTGGATTATACTTGGTTAAAGCATAAGGTTATACTTAGT AATTTAGCAAATGCAGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEFMDVYSMAPKSKYGELSYLYI AKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQREIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAY ATLRNHDKSGIDYIKSIQNKDIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPVAYISLSSLWMHPGYLATYKI PFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEEIQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISR ENPYNETFAYRLYSVYKEDPSLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILKLNKKDYQNALKYFETYIEIY NKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQNLWAKAAIILWGE
Sequences:
>Translated_612_residues MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEFMDVYSMAPKSKYGELSYLYI AKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQREIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAY ATLRNHDKSGIDYIKSIQNKDIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPVAYISLSSLWMHPGYLATYKI PFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEEIQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISR ENPYNETFAYRLYSVYKEDPSLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILKLNKKDYQNALKYFETYIEIY NKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQNLWAKAAIILWGE >Mature_612_residues MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEFMDVYSMAPKSKYGELSYLYI AKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQREIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAY ATLRNHDKSGIDYIKSIQNKDIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPVAYISLSSLWMHPGYLATYKI PFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEEIQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISR ENPYNETFAYRLYSVYKEDPSLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILKLNKKDYQNALKYFETYIEIY NKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQNLWAKAAIILWGE
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71791; Mature: 71791
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEF CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHHHH MDVYSMAPKSKYGELSYLYIAKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQ HHHHHCCCCCCCCCEEEEEEEEHHHHCCEEECCCCCCCCEEEEEEECCCEEECCHHHHHH REIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAYATLRNHDKSGIDYIKSIQNK HHHHHHHEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEHHCCCCCHHHHHHHHCCC DIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS CCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCHHHHCCHHHHHHHHHHEEEEC DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPV CCHHHHEEEEHHHCCHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEECCH AYISLSSLWMHPGYLATYKIPFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEE HEEEEHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH IQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISRENPYNETFAYRLYSVYKEDP HHHHHHHHHEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC SLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHH LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILK HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LNKKDYQNALKYFETYIEIYNKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCC LWAKAAIILWGE CEEEEEEEEECC >Mature Secondary Structure MKLFIKKLFILFVFILVLLAASGIKSFGVGSSLNAYLERKLNHAIELIHLRDYQDAISEF CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCHHHHHHHH MDVYSMAPKSKYGELSYLYIAKAYAYENYYSANIKGVQNAIVMLNMYPFYYKVPSYIALQ HHHHHCCCCCCCCCEEEEEEEEHHHHCCEEECCCCCCCCEEEEEEECCCEEECCHHHHHH REIIGDIYLLLGDFNKAGGVFMVLSSKHPNVNKYKIKLAYATLRNHDKSGIDYIKSIQNK HHHHHHHEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEHHCCCCCHHHHHHHHCCC DIKTPEDTALYYFDYGIYYFLTGDYKNTTFMLHEASNYDSFLSYHPYYEFLYGYAFYKLS CCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCHHHHCCHHHHHHHHHHEEEEC DWQDAMFHLELSKRRDIYGRYKNKVNYILMHIYLITKDYLDAHRILKEFLKHDGVFYNPV CCHHHHEEEEHHHCCHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEECCH AYISLSSLWMHPGYLATYKIPFYQNTLDKLMWLHFPSVLSLYPDFGLLNYYLEGGLNSEE HEEEEHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHH IQDMFIGFLNIKFPKKTINFDDINVSFEKPVNYISNLISRENPYNETFAYRLYSVYKEDP HHHHHHHHHEEECCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC SLFAMFIQPSTYENISRVFVYVGDTNGLGFTSGTQDQNIKTFLQGEFYIEQGDIKDGITD CEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHH LNSVLNNLKGDDKEEAEFLIGYYNNDDAMLDRFLSHKNIYASNRLKDYAKLGLLKDGILK HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LNKKDYQNALKYFETYIEIYNKTKDDTYWWALYKAAYISHLLKDKNELKYILGLAKNSQN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCC LWAKAAIILWGE CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA