Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952505

Identifier: 195952505

GI number: 195952505

Start: 112247

End: 113533

Strand: Direct

Name: 195952505

Synonym: HY04AAS1_0125

Alternate gene names: NA

Gene position: 112247-113533 (Clockwise)

Preceding gene: 195952504

Following gene: 195952506

Centisome position: 7.2

GC content: 40.17

Gene sequence:

>1287_bases
ATGGCAAAAAGAGTGGTTATTATAGGCGGTGGTGTAGGTGGCGTATCTACCGCTTACAATTTAAGGAAATTAGACGCTAA
CATTGATATCAAAGTAGTTTCTGGAAGACCTTACTTTGGTTTTACACCGGCGTTTCCTCATTTGGCTATAGGATGGCGTA
AATTTGGTGACATATCAACGCCTCTTCAACCTGTTTTGAAGAAAAAGAACATAGATTTTATAAATGAAGACGCTGAGAAG
ATAGACCCGGATGCCAACAAAGTAACTTTAAAAAGTGGTAAAGTGTTAGAATACGATTATCTTGTAATAGCCACCGGCCC
AAAGCTTGTATTTACAGAGGGCCAAGAGGAAAATGGACATTCTGTATGTACAGTGGATCACGCTTTAGAGCTCAACAAAG
CTTTGGAAAAGTTTTTTGAAAAACCAGGTCCAGTGGTGGTTGGTGCTAAACCAGGTACTAGCTGTTTTGGCCCAGGGTAT
GAATTTGCTTTTATGCTACATTATGAAGCAAAGAAAAGAGGCTTAAGGCATAAGTTCCCAATCCATTATATAACTTCTGA
GCCGTTTTTGGGTCATCTCGGTTTAGGTGGTGTTGGAACCTCAAGAAGGGTTATGGAAGATCTGATGGCCGAAAGGGATA
TAAGACCTATTATAAATGTAAAAACAAAAAAAGTAAACCCTAACTCTGTAGTTTATGAGGATTTAAATGGCAAAGAATAT
GAGGTAGAATCTTCTTTTACTATGCTTATGCCAAGTTTTATGGGTACAGATGTAGTAGCAAGCGCTGGTGATAAAGTAGC
AAATCCGGCCAACAAGATGGTTATAGTGGATAAGTGCTTCAACAATCCAAATTATAGAAACATATACGGTGTTGGTGTAG
TAGCTGCTATACCTCCAGTAGAACAAACTCCAGTGCCTACCGGTACTCCAAAAACTGGTCAAATGATAGAGGGTATGGCT
TTGGCCACCGCTTTAAACATAGTATCTGATATAAGAAACAGCTCAGAAAGGTATATGCCTACTTTGGCCGCTATATGTAT
AGCTGATATGGGTAACGATGCCGCTGGTTTTATAGCCTATCCAGTTATACCACCAAGAGCTTGGACCTTGCAAAAAAGGA
GTAAATGGATGCACTGGGTAAAGAGCGGTTTTGAAAAATACTTCTTGTGGAAGGTAAAGACCGGTGATGTAGAGCCATGG
TTTGAAAAGATGGGTCTTGAGGCTATGTTTAATCTTCACTTAGTAGAGCCATGTCCTGATTGCAGCGGTGTGCCAGGGAA
ACAATAA

Upstream 100 bases:

>100_bases
TTATATATAAGAAAGATTTATTTTCTTATAAGATATATTTATTTACTTATATGTATGTAGTTATATTATAATTAAGTATT
ATCTAACTTTAGGAGGTATT

Downstream 100 bases:

>100_bases
CACTTGAAAAATTTTTTTTATATGTTATTATATTATTAAGGAGGTGAAGTTATGTATTTAGGATTTAAGCTTTCTATGTT
TTTGGCAATTATATTTTATG

Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

Products: NA

Alternate protein names: Sulfide-Quinone Reductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Quinone Reductase; SulfideQuinone Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Sulfide-Quinone Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulphide Oxidoreductase; Dehydrogenase; Sulfide Dehydrogenase; Quinone Reductase; FAD Dependent Oxidoreductase; Sulfide Dehydrogenase Flavoprotein; Flavoprotein Reductase-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Sulfide-Quinone Reductase Related Protein; Flavoprotein Reductase; Sulfide Dehydrogenase Related Protein

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MAKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDISTPLQPVLKKKNIDFINEDAEK
IDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGHSVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGY
EFAFMLHYEAKKRGLRHKFPIHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY
EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPVEQTPVPTGTPKTGQMIEGMA
LATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAYPVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPW
FEKMGLEAMFNLHLVEPCPDCSGVPGKQ

Sequences:

>Translated_428_residues
MAKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDISTPLQPVLKKKNIDFINEDAEK
IDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGHSVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGY
EFAFMLHYEAKKRGLRHKFPIHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY
EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPVEQTPVPTGTPKTGQMIEGMA
LATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAYPVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPW
FEKMGLEAMFNLHLVEPCPDCSGVPGKQ
>Mature_427_residues
AKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDISTPLQPVLKKKNIDFINEDAEKI
DPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGHSVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGYE
FAFMLHYEAKKRGLRHKFPIHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEYE
VESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPVEQTPVPTGTPKTGQMIEGMAL
ATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAYPVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPWF
EKMGLEAMFNLHLVEPCPDCSGVPGKQ

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24657386, Length=280, Percent_Identity=26.4285714285714, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24657391, Length=280, Percent_Identity=26.4285714285714, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47164; Mature: 47033

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDIST
CCCEEEEEECCCCCCHHHCEEEEECCCEEEEEECCCCCCCCCCCCCCHHCCHHHCCCCCC
PLQPVLKKKNIDFINEDAEKIDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGH
CHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCC
SVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGYEFAFMLHYEAKKRGLRHKFP
EEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCC
IHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY
EEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCEE
EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPV
EECCCHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCC
EQTPVPTGTPKTGQMIEGMALATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEE
PVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPWFEKMGLEAMFNLHLVEPCPD
CCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCHHEEEEEEEECCCCC
CSGVPGKQ
CCCCCCCC
>Mature Secondary Structure 
AKRVVIIGGGVGGVSTAYNLRKLDANIDIKVVSGRPYFGFTPAFPHLAIGWRKFGDIST
CCEEEEEECCCCCCHHHCEEEEECCCEEEEEECCCCCCCCCCCCCCHHCCHHHCCCCCC
PLQPVLKKKNIDFINEDAEKIDPDANKVTLKSGKVLEYDYLVIATGPKLVFTEGQEENGH
CHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCC
SVCTVDHALELNKALEKFFEKPGPVVVGAKPGTSCFGPGYEFAFMLHYEAKKRGLRHKFP
EEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCC
IHYITSEPFLGHLGLGGVGTSRRVMEDLMAERDIRPIINVKTKKVNPNSVVYEDLNGKEY
EEEEECCCCEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCEE
EVESSFTMLMPSFMGTDVVASAGDKVANPANKMVIVDKCFNNPNYRNIYGVGVVAAIPPV
EECCCHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCC
EQTPVPTGTPKTGQMIEGMALATALNIVSDIRNSSERYMPTLAAICIADMGNDAAGFIAY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEE
PVIPPRAWTLQKRSKWMHWVKSGFEKYFLWKVKTGDVEPWFEKMGLEAMFNLHLVEPCPD
CCCCCCCEEHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHCCHHEEEEEEEECCCCC
CSGVPGKQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA