| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952474
Identifier: 195952474
GI number: 195952474
Start: 87375
End: 87773
Strand: Direct
Name: 195952474
Synonym: HY04AAS1_0094
Alternate gene names: NA
Gene position: 87375-87773 (Clockwise)
Preceding gene: 195952473
Following gene: 195952475
Centisome position: 5.6
GC content: 29.57
Gene sequence:
>399_bases ATGACCAACATAGTTCTTTTCATGATAAGCACATGGTTTGGTGTTAGTTTGTTTTTTAGCTTTGATGTGGCCCCCACTCT TTTTGATACGCTTTCTACCATGTTGGCTGGTGATGTGGTGGCAAAAATATTTCCAATGTATTTTGGTATTGGACTTTTTA TATTTCTTATGAGTTTTTTTATTTTGTTTTTAAGTGAAAAGCCAACATTCAGAAAAAACTTCGCTTTTTTGATATTAAAT ATAGTTATTTTCATAGCTTTTCTTGTTTTTATATTGCCAGAGGCCTCTTTTTTAAAACATACAGATTATCACGCATTCCT TCGTTTACACGCTTTTAGTATGGTATTAAATCTTATACAAATGATAAATAGCTTTTTTATAATACTAAGTTTGATATGA
Upstream 100 bases:
>100_bases GGATTAATGTCCTTGATATACAAAACAGTATTTTTTTATTGGAAAAGCCCGTAAACTTTGAAAATATAAACAACATATAC AAGGATATTCTTTCTTTGTT
Downstream 100 bases:
>100_bases CAAGGCTTGGTGTACTTGGTTCTACGGGGACTATTGGGAAAAATGCCCTTGATATTGTTAGATCAAACAAAGATAAGATA GAGCTTATAGGTATAGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFFILFLSEKPTFRKNFAFLILN IVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQMINSFFIILSLI
Sequences:
>Translated_132_residues MTNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFFILFLSEKPTFRKNFAFLILN IVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQMINSFFIILSLI >Mature_131_residues TNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFFILFLSEKPTFRKNFAFLILNI VIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQMINSFFIILSLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15266; Mature: 15135
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFF CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILFLSEKPTFRKNFAFLILNIVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MINSFFIILSLI HHHHHHHHHHCC >Mature Secondary Structure TNIVLFMISTWFGVSLFFSFDVAPTLFDTLSTMLAGDVVAKIFPMYFGIGLFIFLMSFF CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILFLSEKPTFRKNFAFLILNIVIFIAFLVFILPEASFLKHTDYHAFLRLHAFSMVLNLIQ HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MINSFFIILSLI HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]