| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952471
Identifier: 195952471
GI number: 195952471
Start: 85619
End: 86767
Strand: Direct
Name: 195952471
Synonym: HY04AAS1_0091
Alternate gene names: NA
Gene position: 85619-86767 (Clockwise)
Preceding gene: 195952470
Following gene: 195952472
Centisome position: 5.49
GC content: 41.34
Gene sequence:
>1149_bases ATGAAATTACCACCACTTAGAATAAGGCATATAGAGGTGGAGATACCTATTATACAAGGGGGTATGGGCGTAGGTATTTC TTGGGAAAAATTGGCAGGGGCTGTTGCATCCTGCGGTGCTGTAGGTGTTGTATCCTCAGTGGGTACAGGTTATAGATTTT TAGAACTTGTTAAAAAAGATAAGTTTGGAAGACCGATAGGCACTGAAAATGCTCACAACGGCGAGGCTTTGAGGCTCATT ATTCAAAAAGCCAGAGAAATAGCCGGTGGCAAAGGCGCCATAGGTGTAAATATACTATCTGCTATAAACGATTACGGTAG GGTAGCAAACGAAGCTGCCAAGTTTGGAGCTGATTTAATCATATCTGGAGCAGGACTTCCTTTGAAGTTGCCAGAGTATA CAGAGGGGTATGATACGGCTTTGGTGCCTATAGTATCTTCTGCTAGGGCTTTAAACCTTATAGCCAAAACATGGAAAAAG CGCTATAACAGGTTACCAGATGCTGTCGTTTTGGAAGGTCCCATGTCTGGTGGTCATCAAGGTTTTAAGTATGAAGATTG TTTTAAGCCGGAATTTCAACTTGAAAATTTGTTTGATGAGGTTTACAAAGAGGCTCAAGAATGGGGTAATATACCTCTTA TAGTGGCAGGTGGTGTTTGGGATTACAAAGATATAAAAACCTACATTCAAAGAGGTGCTGTCGGTGTTCAGATGGCCACC AGGTTTGCAGTTACAAAAGAAAGCGATGCACCGCTTGTATACAAGGAGCTTCTTTTAAACGCTGAAGAAAAGGATATAAT GCTTCTAAAATCGCCGGTGGGATATCCTTTGAGGGTTATAAAAACGCCTTTTGTGGAAAAGCTTTTAAACGGATACAACG GCTGGAAAGGATGCGTTTCTGATTGCGTGGCCCCTTGTAAGCATGGAGAGGAGGCTAAAAAAGTAGGTTTTTGTATAGCC GATAGGCTTGGAGCTGCTTGTCTTGGCAATGTAGAAGAAGGTATTTTTATAAGCGGTGCCAACGGATATAAGTTGAAAAA GCAAGGTATAATATCTGTCTGTGAGCTTATAGATATGCTTACTGGTAAAATGCCAGACCCCACTATAGATACTGTAGAAA ACAAAGAGACATTTACAGAGGTGATATAA
Upstream 100 bases:
>100_bases TTTATGATATTTACCCATATGAGGCATTTCAGACATTGAAGCTTTGCAAATTTGAGAATTGTTTTTATATTTTATGTATA TCCAATAGTGAGAGGTTTTT
Downstream 100 bases:
>100_bases GTGAGGTTTTATGGGCTTTTAAAAGATGAAGATTTTTTAAATATTGTGCAAAAAATCTCTGGTGATAATTGGATTATAGA AGATACAAAATCAAAAACAA
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Protein; Dioxygenase; Oxidoreductase; Enoyl-[Acyl-Carrier-Protein] Reductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase-Like; Enoyl-ACP Reductase; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Trans-2-Enoyl-ACP Reductase II; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKDKFGRPIGTENAHNGEALRLI IQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLIISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKK RYNRLPDAVVLEGPMSGGHQGFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVSDCVAPCKHGEEAKKVGFCIA DRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDMLTGKMPDPTIDTVENKETFTEVI
Sequences:
>Translated_382_residues MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKDKFGRPIGTENAHNGEALRLI IQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLIISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKK RYNRLPDAVVLEGPMSGGHQGFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVSDCVAPCKHGEEAKKVGFCIA DRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDMLTGKMPDPTIDTVENKETFTEVI >Mature_382_residues MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKDKFGRPIGTENAHNGEALRLI IQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLIISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKK RYNRLPDAVVLEGPMSGGHQGFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVSDCVAPCKHGEEAKKVGFCIA DRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDMLTGKMPDPTIDTVENKETFTEVI
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41479; Mature: 41479
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKD CCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH KFGRPIGTENAHNGEALRLIIQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE ISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKKRYNRLPDAVVLEGPMSGGHQ EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC GFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHH RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVS HEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHCCCCCHHHHHH DCVAPCKHGEEAKKVGFCIADRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDML HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHHH TGKMPDPTIDTVENKETFTEVI HCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MKLPPLRIRHIEVEIPIIQGGMGVGISWEKLAGAVASCGAVGVVSSVGTGYRFLELVKKD CCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHH KFGRPIGTENAHNGEALRLIIQKAREIAGGKGAIGVNILSAINDYGRVANEAAKFGADLI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE ISGAGLPLKLPEYTEGYDTALVPIVSSARALNLIAKTWKKRYNRLPDAVVLEGPMSGGHQ EECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC GFKYEDCFKPEFQLENLFDEVYKEAQEWGNIPLIVAGGVWDYKDIKTYIQRGAVGVQMAT CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHH RFAVTKESDAPLVYKELLLNAEEKDIMLLKSPVGYPLRVIKTPFVEKLLNGYNGWKGCVS HEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCHHHHHHHCCCCCHHHHHH DCVAPCKHGEEAKKVGFCIADRLGAACLGNVEEGIFISGANGYKLKKQGIISVCELIDML HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECHHHHHHHHHHHHHH TGKMPDPTIDTVENKETFTEVI HCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA