| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yheS [H]
Identifier: 194737834
GI number: 194737834
Start: 3507746
End: 3509653
Strand: Direct
Name: yheS [H]
Synonym: SeSA_A3655
Alternate gene names: 194737834
Gene position: 3507746-3509653 (Clockwise)
Preceding gene: 194736094
Following gene: 194738184
Centisome position: 74.49
GC content: 57.55
Gene sequence:
>1908_bases ATGATTGTTTTCTCCTCGTTACAAATTCGTCGCGGCGTGCGCGTCCTACTGGACAATGCCTCGGCTACCATTAATCCAGG CCAGAAAGTCGGCCTGGTGGGTAAAAACGGCTGCGGTAAATCTACCCTGCTGGCATTGCTAAAAAATGAAATCAGCGCCG ATGCCGGGAGTTTTACCCTGCCCGGAACCTGGCAATTAGCGTGGGTGAATCAGGAAACACCTGCGTTGCCTCAGCCAGCG ATTGAGTATGTCATTGATAGCGACCGTGAATACCGGCAGCTGGAGGCGCAGCTTAACGACGCCAACGAACGTAACGACGG ACATGCTATCGCCTCCATACACGGTAAGCTGGACGCCATCGACGCATGGACCGTTCGCTCGCGCGCCGCCAGCCTGCTAC ACGGCCTCGGCTTCTCTAACGATCAGCTGGAACGTCCGGTCAGCGACTTTTCCGGCGGCTGGCGGATGCGCCTTAACCTG GCCCAGGCGCTGATTTGCCGTTCCGATTTACTGCTGCTCGACGAACCGACCAACCACCTCGATCTGGATGCCGTTATCTG GCTGGAAAAATGGCTGAAGAGCTATCCGGGCACCCTGATTCTGATCTCCCACGATCGCGATTTTCTTGACCCGATAGTGG ATAAAATTATCCATATCGAACAGCAGACTCTGTTCGAGTACACCGGCAACTACAGCGCGTTTGAAGTTCAGCGCGCCACG CGCCTGGCGCAACAGCAGGCGATGTATGAGAGCCAGCAGGAGCGTGTGGCGCATCTGCAAAGCTACATCGACCGTTTCCG CGCCAAAGCGACCAAGGCCAAGCAGGCACAAAGCCGTATCAAGATGCTGGAGCGTATGGAGCTGATTGCGCCAGCTCATG TCGACAACCCGTTCCATTTCAGCTTCCGCGCGCCGGAAAGCCTGCCGAACCCGCTGCTGAAGATGGAAAAAGTCAGCGCA GGTTATGGCGATCGCATCATTCTGGAATCCATCAAGCTGAACCTGGTGCCCGGCTCACGTATCGGCCTGCTGGGCCGCAA CGGTGCGGGGAAATCGACGCTGATCAAGCTGCTGGCGGGCGAACTGGAACCGTTGCACGGTGAAATTGGCCTCGCCAAAG GCATTAAGCTCGGCTACTTCGCCCAGCACCAACTGGAGTTCCTGCGCGCCGATGAATCCCCGTTGCAGCATATGGCGCGT CTGGCGCCGCAGGAACTGGAGCAGAAGCTGCGCGACTATCTCGGCGGCTTCGGTTTCCAGGGCGACAAAGTAACGGAAGA GACGCAACGTTTCTCCGGCGGCGAGAAAGCGCGCTTGGTACTGGCGCTGATCGTCTGGCAGCGTCCAAATCTGCTGCTGC TCGATGAACCGACCAACCACCTGGATCTCGACATGCGTCAGGCGCTCACCGAAGCGCTGATTGATTTTGAAGGCGCATTG GTCGTCGTGTCGCACGACCGCCACCTGATTCGCTCCACCACTGACGACCTCTATCTGGTGCACGACAAAAAGGTCGAACC GTTCGACGGCGACCTGGAAGATTATCAGCAGTGGCTGAGCGACGTGCAGAAGCAGGAAAACCAGGCCGACGACGCGCCGA AGGAAAACAACGCCAACAGCGCCCAGTCACGCAAAGATCAGAAGCGTCGCGAAGCCGAGCTACGTACTCTGACGCAGCCG CTGCGTAAAGAGATTACCCGTCTGGAAAAAGAGATGGAAAAGCTCAACGCCCAACTGGCGCAGGCGGAAGAGAAACTCGG CGACAGCAGCCTGTATGACCCCAGCCGTAAAGCGGAGATGACCGAGTGTCTGCAACTGCAGGCCAGCGCCAAATCCGGGC TGGAAGAGTGTGAAATGGCATGGCTTGAGGCGCAGGAGCAGCTTGAGCAAATGATGCAGAACGACTAA
Upstream 100 bases:
>100_bases GTTGTTGTTTTGAGCTACCATTGCGCTCCAGCGCGGCGGTACGCCCGAATATTACATTATCATAATGATAAATTAACATA GTCTGAACATACGGCGCCTT
Downstream 100 bases:
>100_bases CGCGCGGGGCGGACGATGAACCTGTCAATCACCGATGACATTACCTTCCGCAAGCTCACCATCTTCATGATGTTTGTGGA GAAAGGTAACATCGCCCGCA
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLLALLKNEISADAGSFTLPGTWQLAWVNQETPALPQPA IEYVIDSDREYRQLEAQLNDANERNDGHAIASIHGKLDAIDAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNL AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYPGTLILISHDRDFLDPIVDKIIHIEQQTLFEYTGNYSAFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFHFSFRAPESLPNPLLKMEKVSA GYGDRIILESIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELEPLHGEIGLAKGIKLGYFAQHQLEFLRADESPLQHMAR LAPQELEQKLRDYLGGFGFQGDKVTEETQRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLIRSTTDDLYLVHDKKVEPFDGDLEDYQQWLSDVQKQENQADDAPKENNANSAQSRKDQKRREAELRTLTQP LRKEITRLEKEMEKLNAQLAQAEEKLGDSSLYDPSRKAEMTECLQLQASAKSGLEECEMAWLEAQEQLEQMMQND
Sequences:
>Translated_635_residues MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLLALLKNEISADAGSFTLPGTWQLAWVNQETPALPQPA IEYVIDSDREYRQLEAQLNDANERNDGHAIASIHGKLDAIDAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNL AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYPGTLILISHDRDFLDPIVDKIIHIEQQTLFEYTGNYSAFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFHFSFRAPESLPNPLLKMEKVSA GYGDRIILESIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELEPLHGEIGLAKGIKLGYFAQHQLEFLRADESPLQHMAR LAPQELEQKLRDYLGGFGFQGDKVTEETQRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLIRSTTDDLYLVHDKKVEPFDGDLEDYQQWLSDVQKQENQADDAPKENNANSAQSRKDQKRREAELRTLTQP LRKEITRLEKEMEKLNAQLAQAEEKLGDSSLYDPSRKAEMTECLQLQASAKSGLEECEMAWLEAQEQLEQMMQND >Mature_635_residues MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLLALLKNEISADAGSFTLPGTWQLAWVNQETPALPQPA IEYVIDSDREYRQLEAQLNDANERNDGHAIASIHGKLDAIDAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNL AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYPGTLILISHDRDFLDPIVDKIIHIEQQTLFEYTGNYSAFEVQRAT RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFHFSFRAPESLPNPLLKMEKVSA GYGDRIILESIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELEPLHGEIGLAKGIKLGYFAQHQLEFLRADESPLQHMAR LAPQELEQKLRDYLGGFGFQGDKVTEETQRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLIRSTTDDLYLVHDKKVEPFDGDLEDYQQWLSDVQKQENQADDAPKENNANSAQSRKDQKRREAELRTLTQP LRKEITRLEKEMEKLNAQLAQAEEKLGDSSLYDPSRKAEMTECLQLQASAKSGLEECEMAWLEAQEQLEQMMQND
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=37.7323420074349, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI27881506, Length=513, Percent_Identity=36.4522417153996, Blast_Score=315, Evalue=1e-85, Organism=Homo sapiens, GI10947137, Length=513, Percent_Identity=36.4522417153996, Blast_Score=314, Evalue=1e-85, Organism=Homo sapiens, GI10947135, Length=525, Percent_Identity=35.4285714285714, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI69354671, Length=525, Percent_Identity=35.4285714285714, Blast_Score=276, Evalue=3e-74, Organism=Escherichia coli, GI1789751, Length=632, Percent_Identity=93.3544303797468, Blast_Score=1217, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=33.0812854442344, Blast_Score=298, Evalue=9e-82, Organism=Escherichia coli, GI2367384, Length=531, Percent_Identity=30.1318267419962, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1787182, Length=627, Percent_Identity=28.7081339712919, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1788165, Length=191, Percent_Identity=34.5549738219895, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790190, Length=528, Percent_Identity=23.2954545454545, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI87081782, Length=502, Percent_Identity=24.9003984063745, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI87081791, Length=204, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=28.2407407407407, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787758, Length=205, Percent_Identity=25.3658536585366, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1788506, Length=230, Percent_Identity=27.8260869565217, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI48994997, Length=221, Percent_Identity=25.3393665158371, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1789586, Length=218, Percent_Identity=27.9816513761468, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787500, Length=223, Percent_Identity=27.3542600896861, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI48994883, Length=233, Percent_Identity=25.3218884120172, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=21.5962441314554, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=38.1132075471698, Blast_Score=360, Evalue=2e-99, Organism=Caenorhabditis elegans, GI17555318, Length=524, Percent_Identity=35.3053435114504, Blast_Score=325, Evalue=6e-89, Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=34.3692870201097, Blast_Score=314, Evalue=7e-86, Organism=Caenorhabditis elegans, GI71996809, Length=204, Percent_Identity=31.8627450980392, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193211017, Length=184, Percent_Identity=32.6086956521739, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193211015, Length=184, Percent_Identity=32.6086956521739, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17556528, Length=295, Percent_Identity=23.0508474576271, Blast_Score=66, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=35.7933579335793, Blast_Score=345, Evalue=1e-95, Organism=Saccharomyces cerevisiae, GI6320874, Length=534, Percent_Identity=35.2059925093633, Blast_Score=317, Evalue=3e-87, Organism=Saccharomyces cerevisiae, GI6325030, Length=438, Percent_Identity=28.9954337899543, Blast_Score=155, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6324314, Length=390, Percent_Identity=27.6923076923077, Blast_Score=145, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6323278, Length=391, Percent_Identity=27.6214833759591, Blast_Score=140, Evalue=8e-34, Organism=Drosophila melanogaster, GI24666836, Length=517, Percent_Identity=38.2978723404255, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=37.8585086042065, Blast_Score=351, Evalue=8e-97, Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=37.8585086042065, Blast_Score=351, Evalue=8e-97, Organism=Drosophila melanogaster, GI24641342, Length=532, Percent_Identity=35.7142857142857, Blast_Score=311, Evalue=7e-85, Organism=Drosophila melanogaster, GI24661270, Length=191, Percent_Identity=28.7958115183246, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355589, Length=191, Percent_Identity=28.7958115183246, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007184, Length=163, Percent_Identity=31.2883435582822, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI221500365, Length=163, Percent_Identity=31.2883435582822, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 71677; Mature: 71677
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLLALLKNEISADAGSFTL CEEECCHHHHCCCEEEEECCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEC PGTWQLAWVNQETPALPQPAIEYVIDSDREYRQLEAQLNDANERNDGHAIASIHGKLDAI CCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH DAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLEKWLKSYPGTLILISHDRDFLDPIVDKIIHIEQQTLFEYTGNYSAFEVQRAT CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE SFRAPESLPNPLLKMEKVSAGYGDRIILESIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG EEECCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH ELEPLHGEIGLAKGIKLGYFAQHQLEFLRADESPLQHMARLAPQELEQKLRDYLGGFGFQ CCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCC GDKVTEETQRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL CCCHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VVVSHDRHLIRSTTDDLYLVHDKKVEPFDGDLEDYQQWLSDVQKQENQADDAPKENNANS EEEECCCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AQSRKDQKRREAELRTLTQPLRKEITRLEKEMEKLNAQLAQAEEKLGDSSLYDPSRKAEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH TECLQLQASAKSGLEECEMAWLEAQEQLEQMMQND HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIVFSSLQIRRGVRVLLDNASATINPGQKVGLVGKNGCGKSTLLALLKNEISADAGSFTL CEEECCHHHHCCCEEEEECCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEC PGTWQLAWVNQETPALPQPAIEYVIDSDREYRQLEAQLNDANERNDGHAIASIHGKLDAI CCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH DAWTVRSRAASLLHGLGFSNDQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLEKWLKSYPGTLILISHDRDFLDPIVDKIIHIEQQTLFEYTGNYSAFEVQRAT CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH RLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE SFRAPESLPNPLLKMEKVSAGYGDRIILESIKLNLVPGSRIGLLGRNGAGKSTLIKLLAG EEECCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH ELEPLHGEIGLAKGIKLGYFAQHQLEFLRADESPLQHMARLAPQELEQKLRDYLGGFGFQ CCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCC GDKVTEETQRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL CCCHHHHHHHCCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VVVSHDRHLIRSTTDDLYLVHDKKVEPFDGDLEDYQQWLSDVQKQENQADDAPKENNANS EEEECCCHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AQSRKDQKRREAELRTLTQPLRKEITRLEKEMEKLNAQLAQAEEKLGDSSLYDPSRKAEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH TECLQLQASAKSGLEECEMAWLEAQEQLEQMMQND HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]