| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is treB [H]
Identifier: 194737770
GI number: 194737770
Start: 4572816
End: 4574234
Strand: Reverse
Name: treB [H]
Synonym: SeSA_A4706
Alternate gene names: 194737770
Gene position: 4574234-4572816 (Counterclockwise)
Preceding gene: 194737120
Following gene: 194737289
Centisome position: 97.14
GC content: 56.03
Gene sequence:
>1419_bases ATGAGCAAAGTAAAACAAGCCGATATCGACCGGCTGATTGACCTGGTCGGCGGGCGCGACAACATCGCCACGGTGAGCCA CTGCATTACTCGCCTGCGCTTTGTGCTCCACCAGCCCGCGAACGCCAGGCCAAAAGAGATCGAACAATTACCGATGGTTA AAGGCTGTTTCACCAACGCCGGGCAGTTTCAGGTGGTGATTGGCACCGACGTTGGCGATTACTATAACGCGCTGCTGGAG ACCACCGGCAAAGCGTATGCTGATAAAGAGCAGGCCAAAAAAGCCGCTCGCCAGAACATGAAATGGCATGAGCAGTTAAT TTCCCACTTTGCGGAGATCTTCTTTCCGCTACTACCGGCGTTGATCAGCGGCGGTTTGATCTTAGGCTTTCGTAACGTGA TCGGCGATGTGCCGATGAGCAACGGCCAAACGCTGGCGCAGATGCATCCAGCGCTAAAAACGCTTTATGATTTTTTATGG TTGATCGGCGAAGCGATCTTTTTCTATCTGCCGGTGGGGATCTGCTGGTCGGCGGTGAAAAAAATGGGCGGCACGCCGAT TCTTGGTATCGTGCTCGGCGTGACGCTGGTGTCGCCGCAGTTGATGAATGCGTATCTGCTGGGCCAGCAAACGCCGGACG TCTGGAACTTCGGCTTATTTAGCATTGAGAAAGTGGGCTACCAGGCGCAGGTTATCCCGGCGCTACTGGCAGGGCTGGCG CTTGGGTTTATTGAAACGCGGTTGAAACGCATCGTGCCGGATTATCTCTACCTGGTCGTCGTCCCGGTGTGTTCGTTGAT ACTGGCCGTCTTTCTCGCCCACACCTTTATCGGCCCCTTTGGTCGTATGATCGGCGACGGTGTGGCCTTTGCGGTACGTT ATCTGATGACCGGCAGTTTCGCCCCGATAGGCGCGGCGCTGTTCGGCTTCCTGTATGCCCCGCTGGTCATTACCGGCGTC CACCAGACAACGCTCGCTATCGATATGCAGATGATCCAGAGCATGGGCGGTACGCCAGTCTGGCCGCTGATTGCGCTGTC GAATATCGCGCAGGCCTCCGCCGTGGTGGGCATCATCATCTCCAGCCGTAAACACAATGAACGCGAGATCTCCGTTCCTG CCGCCATTTCCGCTTACCTTGGGGTAACCGAACCGGCGATGTACGGTATCAATCTAAAGTATCGTTTTCCGATGCTGTGC GCGATGATCGGATCTGGTCTGGCGGGACTGCTCTGCGGTCTGAACGGCGTCATCGCCAACGGTATCGGCGTGGGCGGCCT GCCGGGCATCCTGTCTATACCGCCGCGCTACTGGCAGGTGTACGGCATGGCGATGGTTATCGCGATCGTTATCCCGGTGA TTCTGACCACCTTTATCTATCAGCGTAAGCATCGTCAGGGCACATTACAAATTGTCTAA
Upstream 100 bases:
>100_bases TCGTCGCTGCGTTTCGGGAACGTTCCCATTTTTAAACCAACGTTGAAGAGATACTCTTGCGCCAACCCATAACATACCTC CTCTGCCATGAGGCTTTACG
Downstream 100 bases:
>100_bases TACTTCTTCGGGGCGCAGTTGCGTCCCAACGCACTTGCAGGAAACAACAATGACTATTCCCCTCTGGTGGCAAAACGGCG TTATTTATCAGATCTACCCA
Product: PTS system trehalose(maltose)-specific transporter subunits IIBC
Products: NA
Alternate protein names: EIIBC-Tre; EII-Tre; Trehalose-specific phosphotransferase enzyme IIB component; PTS system trehalose-specific EIIB component; Trehalose permease IIC component; PTS system trehalose-specific EIIC component [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSKVKQADIDRLIDLVGGRDNIATVSHCITRLRFVLHQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTDVGDYYNALLE TTGKAYADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDVPMSNGQTLAQMHPALKTLYDFLW LIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPDVWNFGLFSIEKVGYQAQVIPALLAGLA LGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHTFIGPFGRMIGDGVAFAVRYLMTGSFAPIGAALFGFLYAPLVITGV HQTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIIISSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLC AMIGSGLAGLLCGLNGVIANGIGVGGLPGILSIPPRYWQVYGMAMVIAIVIPVILTTFIYQRKHRQGTLQIV
Sequences:
>Translated_472_residues MSKVKQADIDRLIDLVGGRDNIATVSHCITRLRFVLHQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTDVGDYYNALLE TTGKAYADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDVPMSNGQTLAQMHPALKTLYDFLW LIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPDVWNFGLFSIEKVGYQAQVIPALLAGLA LGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHTFIGPFGRMIGDGVAFAVRYLMTGSFAPIGAALFGFLYAPLVITGV HQTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIIISSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLC AMIGSGLAGLLCGLNGVIANGIGVGGLPGILSIPPRYWQVYGMAMVIAIVIPVILTTFIYQRKHRQGTLQIV >Mature_471_residues SKVKQADIDRLIDLVGGRDNIATVSHCITRLRFVLHQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTDVGDYYNALLET TGKAYADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLILGFRNVIGDVPMSNGQTLAQMHPALKTLYDFLWL IGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPDVWNFGLFSIEKVGYQAQVIPALLAGLAL GFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHTFIGPFGRMIGDGVAFAVRYLMTGSFAPIGAALFGFLYAPLVITGVH QTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIIISSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCA MIGSGLAGLLCGLNGVIANGIGVGGLPGILSIPPRYWQVYGMAMVIAIVIPVILTTFIYQRKHRQGTLQIV
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI2367362, Length=472, Percent_Identity=89.6186440677966, Blast_Score=849, Evalue=0.0, Organism=Escherichia coli, GI1790159, Length=406, Percent_Identity=25.8620689655172, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI48994906, Length=432, Percent_Identity=26.8518518518519, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1788769, Length=426, Percent_Identity=26.5258215962441, Blast_Score=132, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011296 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 51207; Mature: 51075
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVKQADIDRLIDLVGGRDNIATVSHCITRLRFVLHQPANARPKEIEQLPMVKGCFTNA CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCC GQFQVVIGTDVGDYYNALLETTGKAYADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPA CCEEEEEECCCHHHHHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LISGGLILGFRNVIGDVPMSNGQTLAQMHPALKTLYDFLWLIGEAIFFYLPVGICWSAVK HHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPDVWNFGLFSIEKVGYQAQVIPALLAGLA HCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH LGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHTFIGPFGRMIGDGVAFAVRYLMTGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APIGAALFGFLYAPLVITGVHQTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIII CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE SSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVIAN ECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHC GIGVGGLPGILSIPPRYWQVYGMAMVIAIVIPVILTTFIYQRKHRQGTLQIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC >Mature Secondary Structure SKVKQADIDRLIDLVGGRDNIATVSHCITRLRFVLHQPANARPKEIEQLPMVKGCFTNA CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHCCCC GQFQVVIGTDVGDYYNALLETTGKAYADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPA CCEEEEEECCCHHHHHHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LISGGLILGFRNVIGDVPMSNGQTLAQMHPALKTLYDFLWLIGEAIFFYLPVGICWSAVK HHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMGGTPILGIVLGVTLVSPQLMNAYLLGQQTPDVWNFGLFSIEKVGYQAQVIPALLAGLA HCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH LGFIETRLKRIVPDYLYLVVVPVCSLILAVFLAHTFIGPFGRMIGDGVAFAVRYLMTGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APIGAALFGFLYAPLVITGVHQTTLAIDMQMIQSMGGTPVWPLIALSNIAQASAVVGIII CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHE SSRKHNEREISVPAAISAYLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVIAN ECCCCCCCCCCCHHHHHHHHCCCCCHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHC GIGVGGLPGILSIPPRYWQVYGMAMVIAIVIPVILTTFIYQRKHRQGTLQIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7608078; 7610040; 9278503 [H]