| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yjbG [H]
Identifier: 194737601
GI number: 194737601
Start: 4292029
End: 4292766
Strand: Direct
Name: yjbG [H]
Synonym: SeSA_A4415
Alternate gene names: 194737601
Gene position: 4292029-4292766 (Clockwise)
Preceding gene: 194734126
Following gene: 194737541
Centisome position: 91.14
GC content: 60.43
Gene sequence:
>738_bases ATGATGAAAAGGACGATAAGCGCGCTGGCGCTGGCCTTTGTCGCGTCATCCGCCTTTGCCAGCGGCACTGTTACCGTTTT TACCCAAGGTAATAGCGAGCCTAAAACGCTGACAGACGCTGAGCGTCTGCTCGATTTAGTCGGACAGCCGCGCCTGGCAA CGAGCTGGTGGCCTGCGGCGGTGATAGGCGAAGAACAGGCGACCGTGACGGCGCGTCAGCAGCAGCAGGAACTTCTCGGG CGACTGGCGGCGCTCAGCGCTGAGGAAGACGGCGATGCGGCGGCGGCGATAAACACACTGCGCCGACAGATTCAGGCGCT GAAGGTGACGGGCAGACAATTCGTGAATCTTGATCCTGACGTGGTGCGGGTGAGCGAACGAGGTAACCCGCCGCTGCAAG GTCACTACACGCTCTGGGTCGGGCCGCAACCCACGCAGGTGACGCTCTTTGGCTTGATTAGCCAGCCGGGCAGCCAGCCG TTCGTCCCTGGGCGGGACGTCGCCAGTTATCTTGAGGGTCAGCGCTTACTCAGCGGCGCGGATCGTAGCTATGCCTGGGT GGTTTACCCTGATGGACGCAGCCAAAAAGCGCCGGTGGCTTACTGGAATAAGCGTCATATCGAGCCGATGCCCGGCAGCA TTATTTTTGTCGGTTTTGCCGATTCCCTTTGGCGCGGCACGCCGGAGGCGATGAATGCCGACATTCTTCATACCCTGACG CAGCGGATACCGGAATAA
Upstream 100 bases:
>100_bases GCTACTGGGTTGATAGCGAAGGCCAAATTCGCCAGACGGAACAGTATTTGGGCGCGAATTACTTTCCGGTGAAAACCACG CTGATTAAGGCGGCAAAATC
Downstream 100 bases:
>100_bases TGAAAAAAACACATCTGCTCAGCGTGCTGGCGCTGGGTATTAGCGCGGCCTGCCATGCCGAAACATATCCAGCCCCTGTT GGGCCTTCACAATCTGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MMKRTISALALAFVASSAFASGTVTVFTQGNSEPKTLTDAERLLDLVGQPRLATSWWPAAVIGEEQATVTARQQQQELLG RLAALSAEEDGDAAAAINTLRRQIQALKVTGRQFVNLDPDVVRVSERGNPPLQGHYTLWVGPQPTQVTLFGLISQPGSQP FVPGRDVASYLEGQRLLSGADRSYAWVVYPDGRSQKAPVAYWNKRHIEPMPGSIIFVGFADSLWRGTPEAMNADILHTLT QRIPE
Sequences:
>Translated_245_residues MMKRTISALALAFVASSAFASGTVTVFTQGNSEPKTLTDAERLLDLVGQPRLATSWWPAAVIGEEQATVTARQQQQELLG RLAALSAEEDGDAAAAINTLRRQIQALKVTGRQFVNLDPDVVRVSERGNPPLQGHYTLWVGPQPTQVTLFGLISQPGSQP FVPGRDVASYLEGQRLLSGADRSYAWVVYPDGRSQKAPVAYWNKRHIEPMPGSIIFVGFADSLWRGTPEAMNADILHTLT QRIPE >Mature_245_residues MMKRTISALALAFVASSAFASGTVTVFTQGNSEPKTLTDAERLLDLVGQPRLATSWWPAAVIGEEQATVTARQQQQELLG RLAALSAEEDGDAAAAINTLRRQIQALKVTGRQFVNLDPDVVRVSERGNPPLQGHYTLWVGPQPTQVTLFGLISQPGSQP FVPGRDVASYLEGQRLLSGADRSYAWVVYPDGRSQKAPVAYWNKRHIEPMPGSIIFVGFADSLWRGTPEAMNADILHTLT QRIPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ymcB [H]
Homologues:
Organism=Escherichia coli, GI1790460, Length=245, Percent_Identity=74.6938775510204, Blast_Score=365, Evalue=1e-102, Organism=Escherichia coli, GI1787220, Length=239, Percent_Identity=40.5857740585774, Blast_Score=185, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010425 [H]
Pfam domain/function: PF06251 DUF1017 [H]
EC number: NA
Molecular weight: Translated: 26736; Mature: 26736
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRTISALALAFVASSAFASGTVTVFTQGNSEPKTLTDAERLLDLVGQPRLATSWWPAA CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH VIGEEQATVTARQQQQELLGRLAALSAEEDGDAAAAINTLRRQIQALKVTGRQFVNLDPD EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCC VVRVSERGNPPLQGHYTLWVGPQPTQVTLFGLISQPGSQPFVPGRDVASYLEGQRLLSGA EEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC DRSYAWVVYPDGRSQKAPVAYWNKRHIEPMPGSIIFVGFADSLWRGTPEAMNADILHTLT CCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHCCCCHHHCHHHHHHHH QRIPE HHCCC >Mature Secondary Structure MMKRTISALALAFVASSAFASGTVTVFTQGNSEPKTLTDAERLLDLVGQPRLATSWWPAA CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH VIGEEQATVTARQQQQELLGRLAALSAEEDGDAAAAINTLRRQIQALKVTGRQFVNLDPD EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCC VVRVSERGNPPLQGHYTLWVGPQPTQVTLFGLISQPGSQPFVPGRDVASYLEGQRLLSGA EEEECCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC DRSYAWVVYPDGRSQKAPVAYWNKRHIEPMPGSIIFVGFADSLWRGTPEAMNADILHTLT CCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHCCCCHHHCHHHHHHHH QRIPE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]