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The map label for this gene is yjbF [H]

Identifier: 194734126

GI number: 194734126

Start: 4291394

End: 4292032

Strand: Direct

Name: yjbF [H]

Synonym: SeSA_A4414

Alternate gene names: 194734126

Gene position: 4291394-4292032 (Clockwise)

Preceding gene: 194735827

Following gene: 194737601

Centisome position: 91.13

GC content: 55.71

Gene sequence:

>639_bases
GTGAAGCGACTCGCACTTATCCTGATTTGCCTGCTATTACAGGCGTGTTCGGCCACCACTAAAGGCTTGGGCGATTCACT
GTGGGACAGTTTGTTCGGTACGCCAGGCGTACAGCTAACGGATGACGATATTCAAAACATGCCTTATGCCAGCCAGTACA
TGCAGCTTAACGGCGGTCCTCAACTGTTTGTGGTGCTCGCTTTCTCGGAAAACGGGCAGCAGAAATGGGTGACGCAGGAT
GGCGCGACGATCGTGACACAGCATGGCCGTCTGGTCAAAACGCTGCTCAGCGGCGACAACCTGATCGATGTGAATAATCT
GGCGGCCGACCCGCTGGCGAAACCAGGACAGATTATCGATGGCGCGACCTGGACTCGCACCCTGGGCTGGACCGAACATC
GCCAGGTGCGTTACGCCACCGCCCGTTCCGTTTTTACATGGCGAGGGACCGATAGCGTTAGCGTCGGCAGTGAAGAGACC
GCCGTGCGGGTGCTGGATGAAGAAGTGACGACCGATCAAACGCGTTGGCGTAATCGCTACTGGGTTGATAGCGAAGGCCA
AATTCGCCAGACGGAACAGTATTTGGGCGCGAATTACTTTCCGGTGAAAACCACGCTGATTAAGGCGGCAAAATCATGA

Upstream 100 bases:

>100_bases
CGGAACCACGACCACCACGACCACCAGTACCCAGTAGTATCGGTACGTTTAACCATAACCACACTCCGGTGTGGTTATTT
TGCCCCTCTGGAGAAGCGTC

Downstream 100 bases:

>100_bases
TGAAAAGGACGATAAGCGCGCTGGCGCTGGCCTTTGTCGCGTCATCCGCCTTTGCCAGCGGCACTGTTACCGTTTTTACC
CAAGGTAATAGCGAGCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKRLALILICLLLQACSATTKGLGDSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFSENGQQKWVTQD
GATIVTQHGRLVKTLLSGDNLIDVNNLAADPLAKPGQIIDGATWTRTLGWTEHRQVRYATARSVFTWRGTDSVSVGSEET
AVRVLDEEVTTDQTRWRNRYWVDSEGQIRQTEQYLGANYFPVKTTLIKAAKS

Sequences:

>Translated_212_residues
MKRLALILICLLLQACSATTKGLGDSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFSENGQQKWVTQD
GATIVTQHGRLVKTLLSGDNLIDVNNLAADPLAKPGQIIDGATWTRTLGWTEHRQVRYATARSVFTWRGTDSVSVGSEET
AVRVLDEEVTTDQTRWRNRYWVDSEGQIRQTEQYLGANYFPVKTTLIKAAKS
>Mature_212_residues
MKRLALILICLLLQACSATTKGLGDSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFSENGQQKWVTQD
GATIVTQHGRLVKTLLSGDNLIDVNNLAADPLAKPGQIIDGATWTRTLGWTEHRQVRYATARSVFTWRGTDSVSVGSEET
AVRVLDEEVTTDQTRWRNRYWVDSEGQIRQTEQYLGANYFPVKTTLIKAAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcC [H]

Homologues:

Organism=Escherichia coli, GI87082360, Length=211, Percent_Identity=86.7298578199052, Blast_Score=386, Evalue=1e-109,
Organism=Escherichia coli, GI1787221, Length=213, Percent_Identity=38.4976525821596, Blast_Score=165, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021308 [H]

Pfam domain/function: PF11102 DUF2886 [H]

EC number: NA

Molecular weight: Translated: 23584; Mature: 23584

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLALILICLLLQACSATTKGLGDSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCHHHCCCCHHHHEEECCCC
QLFVVLAFSENGQQKWVTQDGATIVTQHGRLVKTLLSGDNLIDVNNLAADPLAKPGQIID
EEEEEEEECCCCCEEEEECCCCEEEECCCHHHHHHHCCCCEEECCCCCCCCCCCCCCEEC
GATWTRTLGWTEHRQVRYATARSVFTWRGTDSVSVGSEETAVRVLDEEVTTDQTRWRNRY
CCCEEEECCCCCHHHEEEEHHCEEEEECCCCCCCCCCCHHHEEEHHHHHCCCHHHHCCCE
WVDSEGQIRQTEQYLGANYFPVKTTLIKAAKS
EECCCCCHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MKRLALILICLLLQACSATTKGLGDSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGP
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCHHHCCCCHHHHEEECCCC
QLFVVLAFSENGQQKWVTQDGATIVTQHGRLVKTLLSGDNLIDVNNLAADPLAKPGQIID
EEEEEEEECCCCCEEEEECCCCEEEECCCHHHHHHHCCCCEEECCCCCCCCCCCCCCEEC
GATWTRTLGWTEHRQVRYATARSVFTWRGTDSVSVGSEETAVRVLDEEVTTDQTRWRNRY
CCCEEEECCCCCHHHEEEEHHCEEEEECCCCCCCCCCCHHHEEEHHHHHCCCHHHHCCCE
WVDSEGQIRQTEQYLGANYFPVKTTLIKAAKS
EECCCCCHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]