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The map label for this gene is ymfO [C]

Identifier: 194734728

GI number: 194734728

Start: 4333959

End: 4335263

Strand: Direct

Name: ymfO [C]

Synonym: SeSA_A4463

Alternate gene names: 194734728

Gene position: 4333959-4335263 (Clockwise)

Preceding gene: 194737485

Following gene: 194734371

Centisome position: 92.03

GC content: 50.42

Gene sequence:

>1305_bases
ATGGCGAATAATAAACACCCCGGGCGAATAAAAAGCGCCCTTTTAAACTGGCTGGGCGTCCCCGTCAGCCTGACTAACGG
CGAGTTCTGGCGCGAGTGGTTCGGAACCAGCAGCAGTGGAAAAGTTGTGACTGCTGATAAGATTATCCGCCTGTCTGCTG
TATGGGCCTGTGTCAGGTTGTTGAGTGAATCGGTTTCCACGTTACCGCTGAAAATCTACGAACGTCAGGCTGATGGCTCC
CGAAAACTGGCTTCTGATAATCCTGCTTACCAGGTGCTTTGTCGGCGCCCCAATCCTGAAATGACGCCGTCACGTTTTAT
GCTGATGGTGGTCGCCAGTATCTGTCTGCGGGGAAATGCATTTGTTGAAAAACTGTTTATTGGCAGAAAACTGGTATCGC
TGGTTCCGCTGTTACCACAGAACATGGTAGTAAAACGACTGGATAGTGGGCAATTGCAGTACTCATATACTGAGAACGGA
AAACAGCGAATTATACCTGTAAACCGGATTATGCATATCCGTGGATTCGGTCTGGATGGTGTATGTGGCATGATGCCTGC
GATGACGGGCATCGATGTCTTTGGTGCGGCAATGTCGGTGGATGAAGCCGCGGCAAAAATCTTTGAAAATGGCCTTCAGA
GTACAGGGTTTCTTTCTTCAAAAAATGCGCTGACCAAAGAGCAGCGTGATCGTCTGAGGCAAAACCTTCAGTCTTTTATC
GGTTCAAAAAATGCCGGGAAACTGATGGTGCTGGAAAATGAACTCACATACCAGAATGTCACCATGAATCCGGAAGCGGC
ACAATTGCTGGAAAGCCGTTCCTTCAGTATCGAGGAAATTTGCCGCTGGTTTCGCGTTCCTCCTTTCATGGTCGGTCATA
CCACTAAACAAAGCAGCTGGGCATCCAGTCTTGAAGGGATGAACCTTCAGTTCCTGACGCACACTCTTCGACCGCTGCTG
GTGAATATTGAACAGGAAATTGGCCGGTGCCTGCTCGATAGCGATGATGACGTGTTCGCGGAGTTCTCCGTTGAAGGACT
GCTGCGCGCCGACAGCGCTGGCCGTGCGGCTTACTATACCAGCGCGCTTCAGAATGGCTGGATGTCGCGAAACGATGTTC
GCCGTCTGGAAAATATGCCGCCGATTGAAGGGGGGGACATTTACACCGTTCAGCTCAACCTGACGCAACTGAAAAATCTC
GAAAGCAGCAATCCTGCTGTTCAGGCTCTGGCCCTGAGAGAACTGCATAACCACGTATTCCCCGATATTTCCTTTGAACA
ATCTCCGCTGAAACAGGCCGCTTAG

Upstream 100 bases:

>100_bases
TGGTGGCTTCCGCTATGGCAATAGGTGCATCAGAAGAGGATGTCACTGATGATGGCGATGTTGATGGTTTCTTTGATGAT
CCAATCATAGTGGGTATCTG

Downstream 100 bases:

>100_bases
GAGCACTTTCCTGATGAGCAAAAAACAACTTCCGGTAGCACCGGCGGGGCGCCCCTGTGCGCGCGTTACCTGTGAAACCC
TTCCTTCCGCACTGGACCGC

Product: phage portal protein, HK97 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MANNKHPGRIKSALLNWLGVPVSLTNGEFWREWFGTSSSGKVVTADKIIRLSAVWACVRLLSESVSTLPLKIYERQADGS
RKLASDNPAYQVLCRRPNPEMTPSRFMLMVVASICLRGNAFVEKLFIGRKLVSLVPLLPQNMVVKRLDSGQLQYSYTENG
KQRIIPVNRIMHIRGFGLDGVCGMMPAMTGIDVFGAAMSVDEAAAKIFENGLQSTGFLSSKNALTKEQRDRLRQNLQSFI
GSKNAGKLMVLENELTYQNVTMNPEAAQLLESRSFSIEEICRWFRVPPFMVGHTTKQSSWASSLEGMNLQFLTHTLRPLL
VNIEQEIGRCLLDSDDDVFAEFSVEGLLRADSAGRAAYYTSALQNGWMSRNDVRRLENMPPIEGGDIYTVQLNLTQLKNL
ESSNPAVQALALRELHNHVFPDISFEQSPLKQAA

Sequences:

>Translated_434_residues
MANNKHPGRIKSALLNWLGVPVSLTNGEFWREWFGTSSSGKVVTADKIIRLSAVWACVRLLSESVSTLPLKIYERQADGS
RKLASDNPAYQVLCRRPNPEMTPSRFMLMVVASICLRGNAFVEKLFIGRKLVSLVPLLPQNMVVKRLDSGQLQYSYTENG
KQRIIPVNRIMHIRGFGLDGVCGMMPAMTGIDVFGAAMSVDEAAAKIFENGLQSTGFLSSKNALTKEQRDRLRQNLQSFI
GSKNAGKLMVLENELTYQNVTMNPEAAQLLESRSFSIEEICRWFRVPPFMVGHTTKQSSWASSLEGMNLQFLTHTLRPLL
VNIEQEIGRCLLDSDDDVFAEFSVEGLLRADSAGRAAYYTSALQNGWMSRNDVRRLENMPPIEGGDIYTVQLNLTQLKNL
ESSNPAVQALALRELHNHVFPDISFEQSPLKQAA
>Mature_433_residues
ANNKHPGRIKSALLNWLGVPVSLTNGEFWREWFGTSSSGKVVTADKIIRLSAVWACVRLLSESVSTLPLKIYERQADGSR
KLASDNPAYQVLCRRPNPEMTPSRFMLMVVASICLRGNAFVEKLFIGRKLVSLVPLLPQNMVVKRLDSGQLQYSYTENGK
QRIIPVNRIMHIRGFGLDGVCGMMPAMTGIDVFGAAMSVDEAAAKIFENGLQSTGFLSSKNALTKEQRDRLRQNLQSFIG
SKNAGKLMVLENELTYQNVTMNPEAAQLLESRSFSIEEICRWFRVPPFMVGHTTKQSSWASSLEGMNLQFLTHTLRPLLV
NIEQEIGRCLLDSDDDVFAEFSVEGLLRADSAGRAAYYTSALQNGWMSRNDVRRLENMPPIEGGDIYTVQLNLTQLKNLE
SSNPAVQALALRELHNHVFPDISFEQSPLKQAA

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 48461; Mature: 48330

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNKHPGRIKSALLNWLGVPVSLTNGEFWREWFGTSSSGKVVTADKIIRLSAVWACVRL
CCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHH
LSESVSTLPLKIYERQADGSRKLASDNPAYQVLCRRPNPEMTPSRFMLMVVASICLRGNA
HHHHHHHCCHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHH
FVEKLFIGRKLVSLVPLLPQNMVVKRLDSGQLQYSYTENGKQRIIPVNRIMHIRGFGLDG
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCEEEEEHHHEEEEECCCCCC
VCGMMPAMTGIDVFGAAMSVDEAAAKIFENGLQSTGFLSSKNALTKEQRDRLRQNLQSFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GSKNAGKLMVLENELTYQNVTMNPEAAQLLESRSFSIEEICRWFRVPPFMVGHTTKQSSW
CCCCCCEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCHHHH
ASSLEGMNLQFLTHTLRPLLVNIEQEIGRCLLDSDDDVFAEFSVEGLLRADSAGRAAYYT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCHHHHH
SALQNGWMSRNDVRRLENMPPIEGGDIYTVQLNLTQLKNLESSNPAVQALALRELHNHVF
HHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHC
PDISFEQSPLKQAA
CCCCCCCCCHHHCC
>Mature Secondary Structure 
ANNKHPGRIKSALLNWLGVPVSLTNGEFWREWFGTSSSGKVVTADKIIRLSAVWACVRL
CCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHH
LSESVSTLPLKIYERQADGSRKLASDNPAYQVLCRRPNPEMTPSRFMLMVVASICLRGNA
HHHHHHHCCHHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCHH
FVEKLFIGRKLVSLVPLLPQNMVVKRLDSGQLQYSYTENGKQRIIPVNRIMHIRGFGLDG
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCEEEEEHHHEEEEECCCCCC
VCGMMPAMTGIDVFGAAMSVDEAAAKIFENGLQSTGFLSSKNALTKEQRDRLRQNLQSFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GSKNAGKLMVLENELTYQNVTMNPEAAQLLESRSFSIEEICRWFRVPPFMVGHTTKQSSW
CCCCCCEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCHHHH
ASSLEGMNLQFLTHTLRPLLVNIEQEIGRCLLDSDDDVFAEFSVEGLLRADSAGRAAYYT
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCHHHHH
SALQNGWMSRNDVRRLENMPPIEGGDIYTVQLNLTQLKNLESSNPAVQALALRELHNHVF
HHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHC
PDISFEQSPLKQAA
CCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA