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The map label for this gene is yjjQ [C]

Identifier: 194737413

GI number: 194737413

Start: 4450508

End: 4450780

Strand: Reverse

Name: yjjQ [C]

Synonym: SeSA_A4569

Alternate gene names: 194737413

Gene position: 4450780-4450508 (Counterclockwise)

Preceding gene: 194737340

Following gene: 194736039

Centisome position: 94.51

GC content: 30.4

Gene sequence:

>273_bases
ATGCAGTATAAGAACAAAGCAAAACATATTAATATAAGAGATGGGATTCTGTTGCTCGCTAAAAAATTCGACCTAACATT
GAGCGAGAAAAAAGTCATTTATTACGTGGCAGCAGGATTATCTGTTAAAAGTTGCTCAAATTTATTAGATCGAAATATAA
AAACGATTTCAACACAAAAGAGATCAGCCTATAAAAAAATGGATATTACTACTGATGTTGAATTAATCCATTTGATGCTG
AATGAGTTTTACATATCAGTCGATATTACGTAA

Upstream 100 bases:

>100_bases
TTACATGCGTTTTTAAAAAACACTTCAAAACTACACCATCGGAATTTTTAGCGTTTTTATCTTCCTCTCGTCATCAATAT
GTTAATTGAGATATCTGACA

Downstream 100 bases:

>100_bases
TTTTTTCTAAAATGTTGCCAAAGTGGTAGGCAAGGCAATTCTGGATATCATCTTCAGAGATCGGTGTGATATCTACGTTG
TTTAATTTAACTGTTCCCGT

Product: putative GerE family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVELIHLML
NEFYISVDIT

Sequences:

>Translated_90_residues
MQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVELIHLML
NEFYISVDIT
>Mature_90_residues
MQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQKRSAYKKMDITTDVELIHLML
NEFYISVDIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10368; Mature: 10368

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQK
CCCCCCCCEEECCCCEEEEEEECCCEECCCEEEEEEECCCCHHHHHHHHHCCCHHHCCHH
RSAYKKMDITTDVELIHLMLNEFYISVDIT
HHHHHHCCCCCHHHHHHHHHHHEEEEEEEC
>Mature Secondary Structure
MQYKNKAKHINIRDGILLLAKKFDLTLSEKKVIYYVAAGLSVKSCSNLLDRNIKTISTQK
CCCCCCCCEEECCCCEEEEEEECCCEECCCEEEEEEECCCCHHHHHHHHHCCCHHHCCHH
RSAYKKMDITTDVELIHLMLNEFYISVDIT
HHHHHHCCCCCHHHHHHHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA