Click here to switch to the map view.

The map label for this gene is yfeC [H]

Identifier: 194737057

GI number: 194737057

Start: 2532050

End: 2532397

Strand: Direct

Name: yfeC [H]

Synonym: SeSA_A2647

Alternate gene names: 194737057

Gene position: 2532050-2532397 (Clockwise)

Preceding gene: 194735794

Following gene: 194735830

Centisome position: 53.77

GC content: 51.72

Gene sequence:

>348_bases
ATGACGCCAGAAGAACTCGCTAATCTCACCGGTTACAGCCGACAAACCATCAATAAATGGGTACGGAAAGAAGGCTGGGC
AACATCGCCCAAACCTGGCGTCCAGGGCGGTAAAGCCCGTCTGGTTCATGTAAACGAACAGGTTCGTGAGTATATCCGCA
GCGCTGAACGTTCAGTTGACCATCACGCAGACACATTCACGCCTGCCAGCAACGCATCGCTTGAAGCGCTGCTTATGACG
CTCGCCAAAGAGATGACCTCATCCGAGCAGAAACAGTTTACCTCTCTCCTCGTGCGTGAAGGGATTACCGGTTTGTTACA
ACGCTTAGGGATACGCGATAGCAAATAA

Upstream 100 bases:

>100_bases
AGTAGTTAAACACGTCACGGTTTCGACTAAAATGGTGCTATAAAATGAACCACTAATTAACCCCACGACTATTCAGGGAA
TCGTTATGTTCAAGGAACGG

Downstream 100 bases:

>100_bases
TATGAAAAGATTACGCAGTAAAATGACCACTGAAGAGCTGGCTGAATGCCTCGGCGTGGCCAGACAAACCGTCAATCGCT
GGATCAGAGAACAACACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKARLVHVNEQVREYIRSAERSVDHHADTFTPASNASLEALLMT
LAKEMTSSEQKQFTSLLVREGITGLLQRLGIRDSK

Sequences:

>Translated_115_residues
MTPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKARLVHVNEQVREYIRSAERSVDHHADTFTPASNASLEALLMT
LAKEMTSSEQKQFTSLLVREGITGLLQRLGIRDSK
>Mature_114_residues
TPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKARLVHVNEQVREYIRSAERSVDHHADTFTPASNASLEALLMTL
AKEMTSSEQKQFTSLLVREGITGLLQRLGIRDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiI and P.aeruginosa rluD [H]

Homologues:

Organism=Escherichia coli, GI87082097, Length=115, Percent_Identity=78.2608695652174, Blast_Score=180, Evalue=2e-47,
Organism=Escherichia coli, GI226510963, Length=126, Percent_Identity=37.3015873015873, Blast_Score=86, Evalue=7e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010749
- InterPro:   IPR011991
- ProDom:   PD060594 [H]

Pfam domain/function: PF07037 DUF1323 [H]

EC number: NA

Molecular weight: Translated: 12852; Mature: 12721

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKARLVHVNEQVREYIRSAERSVD
CCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
HHADTFTPASNASLEALLMTLAKEMTSSEQKQFTSLLVREGITGLLQRLGIRDSK
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPEELANLTGYSRQTINKWVRKEGWATSPKPGVQGGKARLVHVNEQVREYIRSAERSVD
CHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH
HHADTFTPASNASLEALLMTLAKEMTSSEQKQFTSLLVREGITGLLQRLGIRDSK
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]