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The map label for this gene is ycaO [H]

Identifier: 194736995

GI number: 194736995

Start: 1067206

End: 1069041

Strand: Reverse

Name: ycaO [H]

Synonym: SeSA_A1088

Alternate gene names: 194736995

Gene position: 1069041-1067206 (Counterclockwise)

Preceding gene: 194735061

Following gene: 194736658

Centisome position: 22.7

GC content: 52.51

Gene sequence:

>1836_bases
ATGTCCCGGCGAGATAGCGCCCGTCACATAAAACCCGTATCATTGCGCGCTTTCCGTACGACAAAAGTGATTTTCATGAC
GCAAACATTTATTCCCGGCAAAGACGCCGCGCTGGAAGACTCCATCGCCCGCTTCCAGCAAAAGTTACTCGACCTCGGCT
TTCACATCGAAGAGGCCTCCTGGCTGAACCCGGTGCCAAACGTCTGGTCAGTGCATATTCGCGATAAAGAGTGCGCGTTA
TGCTTTACCAACGGAAAAGGCGCGACCAAAAAAGCGGCGCTGGCCTCGGCGCTGGGCGAATACTTCGAGCGTCTGTCAAC
CAACTACTTTTTTGCTGATTTCTGGCTTGGCGAAACGGTCGCCAACGGGCCATTCGTGCATTATCCGAATGAAAAATGGT
TCCCGCTGACTGAAAATGACGACGTACCGGAAGGCTTGCTTGATGCCCGTCTGCGCGCGTTTTACGATCCGGAAAATGAA
CTCACCGGAAGCCAGTTAATTGATCTTCAGTCCGGCAATGAAGAACGCGGCGTCTGCGGCCTGCCATTTACCCGTCAGTC
CGATAACCAGACCGTGTATATTCCGATGAATATTATCGGCAACCTGTATGTCTCTAACGGAATGTCCGCCGGCAATACGC
GTAATGAAGCCCGCGTTCAGGGACTGTCGGAAGTCTTCGAGCGCTATGTGAAAAATCGCATCATTGCGGAAAGTATCAGT
CTGCCGGAGATTCCCGCAGAGGTGATGGCGCGTTATCCGGCGGTAATGGAGTCAATCGCCACGCTGGAAGCCGAGGGTTT
CCCGATTTTCGCCTATGACGGCTCGCTGGGCGGTAAGTATCCGGTTATCTGCGTCGTGCTGTTCAACCCGGCTAACGGTA
CCTGCTTTGCTTCTTTTGGCGCCCATCCTGACTTTGGCGTTGCGTTGGAACGTACAGTGACCGAACTACTCCAGGGACGC
GGTCTGAAAGATCTTGATGTCTTCACCCCACCAACGTTCGATGATGAAGAAGTCGCGGAGCACACTAATCTGGAGACCCA
CTTCATCGACTCCAGCGGCCTGATTTCCTGGGATCTGTTCAAACAGGACGCCGATTACCCGTTCACGGACTGGAGTTTTT
CCGGCACTACCGAAGAAGAATTCGCCACGCTGATGGCCATCTTTGCTGCTGAAGATAAAGAAGTTTACATTGCCGATTAC
GAGCATCTCGGCGTATACGCCTGTCGTATTATCGTACCGGGAATGTCTGATATTTATCCTGCCGAAGATCTGTGGCTGGC
CAACAACAATATGGGTAGCCATCTTCGTGAGACTCTGCTTTCGCTGCCCGGTAGCGCCTGGAATAAAGAAGACTATCTCA
ATCTGATTGAACAATTGGATGAAGAAGGTTTTGACGATTTCACCCGCGTGCGTGAACTGTTGGGTCTGGCGACCGGAGCG
GACAATGGTTGGTATACACTGCGCGTCGGCGAATTAAAAGCAATGCTAGCGTTAGCGGGCGGCGATTTGGAGCAGGCGCT
AATCTGGACAGAATGGACGATGGAGTTCAATTCGTCGGTCTTTAGTCCGGCACGCGCAAACTATTACCGTTGCCTGCAAA
CGCTGCTGCTCCTGTCGCAAGAAGATGCGCGTCAGCCGCTGCAATATCTCAATGCTTTTATAAAAATGTATGGCGCAGAG
GCTGTAGAAGCCGCCAGCGCCGCGCTTAGCGGTGAAGCGGCTTTTTATGGACTACCGGCTGTCGACCACGATCTACAAGC
GTTCCCGGCGCATCAGTCCTTGTTAAAAGCGTATGATAAATTACAGCGCGCGAAAGCGGCATACTGGTCAAAATAA

Upstream 100 bases:

>100_bases
GTTATCCAGCGCCATTCGTTGCAAATCAAATGCTTTCATTTTTTATGCTCTTCCTGTGAATTCCAGTGTAAAAGCATAGC
CAATACTTTTATTTCCGCCG

Downstream 100 bases:

>100_bases
GGCCATATGAGTGACTTAGGGTAGGTTTACCCTCTCGGCTGCGTTATATTACGGGGCGCCTTTGCGGCCCCGTTTTATTT
ATTTTCACTAAACGGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 610

Protein sequence:

>611_residues
MSRRDSARHIKPVSLRAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECAL
CFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENE
LTGSQLIDLQSGNEERGVCGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESIS
LPEIPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGR
GLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADY
EHLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGA
DNGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPARANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAE
AVEAASAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK

Sequences:

>Translated_611_residues
MSRRDSARHIKPVSLRAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECAL
CFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENE
LTGSQLIDLQSGNEERGVCGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESIS
LPEIPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGR
GLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADY
EHLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGA
DNGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPARANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAE
AVEAASAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK
>Mature_610_residues
SRRDSARHIKPVSLRAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEASWLNPVPNVWSVHIRDKECALC
FTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENEL
TGSQLIDLQSGNEERGVCGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISL
PEIPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRG
LKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYE
HLGVYACRIIVPGMSDIYPAEDLWLANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGAD
NGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPARANYYRCLQTLLLLSQEDARQPLQYLNAFIKMYGAEA
VEAASAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDKLQRAKAAYWSK

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=93.1740614334471, Blast_Score=1127, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 68326; Mature: 68195

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRDSARHIKPVSLRAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEAS
CCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
WLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETV
CCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHH
ANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCG
CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEC
LPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESIS
CCCCCCCCCCEEEEEHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LPEIPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFG
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECC
AHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEHH
KQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYP
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCC
AEDLWLANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGA
CCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DNGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPARANYYRCLQTLLLLSQ
CCCEEEEEEHHHHHHHHHCCCCHHHEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCC
EDARQPLQYLNAFIKMYGAEAVEAASAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDK
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHHHHHHHH
LQRAKAAYWSK
HHHHHHHHCCC
>Mature Secondary Structure 
SRRDSARHIKPVSLRAFRTTKVIFMTQTFIPGKDAALEDSIARFQQKLLDLGFHIEEAS
CCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
WLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETV
CCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHH
ANGPFVHYPNEKWFPLTENDDVPEGLLDARLRAFYDPENELTGSQLIDLQSGNEERGVCG
CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEC
LPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESIS
CCCCCCCCCCEEEEEHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LPEIPAEVMARYPAVMESIATLEAEGFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFG
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCEEEECC
AHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEHH
KQDADYPFTDWSFSGTTEEEFATLMAIFAAEDKEVYIADYEHLGVYACRIIVPGMSDIYP
HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHCCEEEEEEEECCCCCCCC
AEDLWLANNNMGSHLRETLLSLPGSAWNKEDYLNLIEQLDEEGFDDFTRVRELLGLATGA
CCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
DNGWYTLRVGELKAMLALAGGDLEQALIWTEWTMEFNSSVFSPARANYYRCLQTLLLLSQ
CCCEEEEEEHHHHHHHHHCCCCHHHEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCC
EDARQPLQYLNAFIKMYGAEAVEAASAALSGEAAFYGLPAVDHDLQAFPAHQSLLKAYDK
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHHHHHHHH
LQRAKAAYWSK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]