Click here to switch to the map view.

The map label for this gene is yfjD [H]

Identifier: 194736792

GI number: 194736792

Start: 2772188

End: 2773429

Strand: Direct

Name: yfjD [H]

Synonym: SeSA_A2875

Alternate gene names: 194736792

Gene position: 2772188-2773429 (Clockwise)

Preceding gene: 194734312

Following gene: 194737489

Centisome position: 58.87

GC content: 53.06

Gene sequence:

>1242_bases
ATGGTGGTCATCTCGGCCTATTTTTCCGGTTCCGAAACTGGAATGATGACGCTAAACCGTTACCGTTTACGCCATATGGC
GAAGCAAGGTAATCGCTCGGCAAAACGGGTAGAAAAATTACTGCGTAAACCCGACCGACTGATAAGCCTGGTGCTGATCG
GCAATAACCTGGTCAACATTCTTGCCTCGGCGCTCGGCACGATTGTGGGTATGCGGCTTTACGGCGACGCCGGCGTGGCT
ATCGCCACTGGGGTACTGACGTTTGTCGTGTTAGTTTTTGCCGAAGTCCTGCCCAAAACTATCGCCGCGCTCTATCCGGA
AAAAGTGGCCTATCCCAGCAGCTTCCTGCTGGCGCCGTTACAGATACTGATGATGCCGCTGGTGTGGTTACTTAACACCA
TCACCCGCCTGCTGATGCATCTGATGGGAATTAAAACGGACATCGTGGTCAGCGGGTCGTTAAGCAAAGAGGAATTACGC
ACTATCGTGCATGAATCCCGTTCGCAAATCTCTCGCCGCAATCAGGATATGCTGCTATCGGTCCTCGACCTGGAAAAGGT
CAGCGTGGATGACATCATGGTACCGCGTAATGAAATTATCGGGATCGATATCAATGACGACTGGAAATCTATCGAGCGGC
AGCTTACCCACTCCCCGCACGGACGCATCGTGCTCTATCGCGATTCGCTGGATGACGCCATCAGTATGCTGCGCGTGCGC
GAAGCCTGGCGGTTAATGGCCGAGAAAAAAGAGTTCACCAAAGAGATGATGCTGCGCGCCGCCGATGAAATCTATTACGT
CCCGGAAGGTACGCCGCTCAGTACGCAACTGATCAAATTTCAGCGCAATAAAAAGAAAGTCGGACTGGTCGTCAACGAAT
ATGGCGATATCCAGGGGCTGGTCACCGTGGAAGATATTCTCGAGGAGATCGTTGGCGACTTCACCACATCGATGTCGCCG
ACACTGGCGGAAGAGGTCACGCCGCAAAACGACGGTTCGGTCATTATTGACGGTACCGCCAACGTCCGGGAAATCAATAA
AGCGTTTAACTGGCACCTGCCGGAAGATGACGCGCGCACCGTCAATGGGGTGATTCTGGAGGCGCTGGAGGAAATTCCGG
TTGCTGGCACGCGCGTGCGCATTGAGCAGTACGATATCGATATTCTCGATGTACAGGAAAATATGATTAAGCAGGTAAAG
GTTGTACCGGTAAAGCCGCTGCGCGAGAGTGTGGCGGAGTAA

Upstream 100 bases:

>100_bases
TTTGGTAGCCGCATATTACAGCAATTTGTAAGCTAAGCTTTTAAAGGAGTTTCCCCTGGAACACATCTCCACCACCACGC
TGATTATCATATTAATCATC

Downstream 100 bases:

>100_bases
CACAATGGCGAACTCCGGTTCGCCTTTTTTATCGCCGTCTTTTAAGATTCCATCAATTCCTGCCATTTACTTAACAATGC
AATAATGACTTTTCAAGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVA
IATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMHLMGIKTDIVVSGSLSKEELR
TIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVR
EAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSP
TLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVK
VVPVKPLRESVAE

Sequences:

>Translated_413_residues
MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVA
IATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMHLMGIKTDIVVSGSLSKEELR
TIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVR
EAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSP
TLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVK
VVPVKPLRESVAE
>Mature_413_residues
MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVA
IATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMHLMGIKTDIVVSGSLSKEELR
TIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVR
EAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSP
TLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVK
VVPVKPLRESVAE

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=383, Percent_Identity=25.8485639686684, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI94681046, Length=321, Percent_Identity=26.1682242990654, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI40068053, Length=326, Percent_Identity=23.9263803680982, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI40068055, Length=326, Percent_Identity=23.9263803680982, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI145693175, Length=408, Percent_Identity=95.8333333333333, Blast_Score=796, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=430, Percent_Identity=22.7906976744186, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1786879, Length=250, Percent_Identity=25.2, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI87082033, Length=247, Percent_Identity=25.1012145748988, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788119, Length=235, Percent_Identity=29.7872340425532, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6324512, Length=332, Percent_Identity=25, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46419; Mature: 46419

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI
CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEEEECCHHHHH
LASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHH
QILMMPLVWLLNTITRLLMHLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHH
VLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVR
HHHHHHCCCCCEECCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH
EAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGL
HHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCE
VTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDART
EEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHH
VNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE
HHHHHHHHHHHCCCCCCEEEEEEECCEEEECHHHHHHHEEECCCCHHHHHHCC
>Mature Secondary Structure
MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI
CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEEEECCHHHHH
LASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHH
QILMMPLVWLLNTITRLLMHLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLS
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHH
VLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVR
HHHHHHCCCCCEECCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHH
EAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGL
HHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCE
VTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDART
EEHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHH
VNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE
HHHHHHHHHHHCCCCCCEEEEEEECCEEEECHHHHHHHEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]