| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is eco [H]
Identifier: 194736714
GI number: 194736714
Start: 2365825
End: 2366331
Strand: Direct
Name: eco [H]
Synonym: SeSA_A2488
Alternate gene names: 194736714
Gene position: 2365825-2366331 (Clockwise)
Preceding gene: 194736026
Following gene: 194735763
Centisome position: 50.24
GC content: 54.04
Gene sequence:
>507_bases GTGAACAATCAAATGAAGATGTTTGTCCCTGCCGTCGTCTTCGCCGCCCTCGCCAGCGCCTCTGCCTGGGCTAACAATAG CGATACCGCCCAGCCGCTGGAGAAAATCGCCCCCTATCCGCAGGCGGAAAAAGGAATGAAGCGGCAAGTGATAACCCTTA CCCCTCAGCAGGATGAATCTACCCTCAAAGTGGAACTGTTGATTGGCCAAACGCTGAATGTGGATTGTAACCAGCATCGC CTCGGCGGCACGCTGGAAACAAAAACGCTGGAAGGCTGGGGCTATGACTATTATGTCTTTGATAACGTCACCTCTCCGGT ATCAACCATGATGGCCTGCCCTGAAGGTAAGAAAGAGCAAAAATTCGTCACCGCCTGGCTGGGTGAAGACGGGATGCTGC GCTACAACAGCAAGCTGCCGATCGTGGTGTATACCCCGGCGAATGTAGACGTGAAATACCGCATCTGGAAAGCGGACGCT AACGTACAGAACGCCGTCGCGCGATAA
Upstream 100 bases:
>100_bases ATTAATAATCTTGAAAATATGAGTAAATACAGATTAATAGATAATATGAATGTGTTAATCTGTTGTCCGTGCATACCGAA AACAGCAGAAAGGAAATACT
Downstream 100 bases:
>100_bases TGTTACGCTGCCCGGTCACACTTACCGGGCATCTGAACACGCCGGCTCACGCAGCGCTCCGGGGTTCTTTTTAAAACACG TCTGGAAATCCGCTCGCCCG
Product: ecotin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNNQMKMFVPAVVFAALASASAWANNSDTAQPLEKIAPYPQAEKGMKRQVITLTPQQDESTLKVELLIGQTLNVDCNQHR LGGTLETKTLEGWGYDYYVFDNVTSPVSTMMACPEGKKEQKFVTAWLGEDGMLRYNSKLPIVVYTPANVDVKYRIWKADA NVQNAVAR
Sequences:
>Translated_168_residues MNNQMKMFVPAVVFAALASASAWANNSDTAQPLEKIAPYPQAEKGMKRQVITLTPQQDESTLKVELLIGQTLNVDCNQHR LGGTLETKTLEGWGYDYYVFDNVTSPVSTMMACPEGKKEQKFVTAWLGEDGMLRYNSKLPIVVYTPANVDVKYRIWKADA NVQNAVAR >Mature_168_residues MNNQMKMFVPAVVFAALASASAWANNSDTAQPLEKIAPYPQAEKGMKRQVITLTPQQDESTLKVELLIGQTLNVDCNQHR LGGTLETKTLEGWGYDYYVFDNVTSPVSTMMACPEGKKEQKFVTAWLGEDGMLRYNSKLPIVVYTPANVDVKYRIWKADA NVQNAVAR
Specific function: General inhibitor of pancreatic serine proteases:inhibits chymotrypsin, trypsin, elastases, factor X, kallikrein as well as a variety of other proteases [H]
COG id: COG4574
COG function: function code R; Serine protease inhibitor ecotin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the protease inhibitor I11 (ecotin) family [H]
Homologues:
Organism=Escherichia coli, GI1788538, Length=164, Percent_Identity=79.2682926829268, Blast_Score=277, Evalue=2e-76,
Paralogues:
None
Copy number: 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005658 - InterPro: IPR023189 - InterPro: IPR023084 [H]
Pfam domain/function: PF03974 Ecotin [H]
EC number: NA
Molecular weight: Translated: 18736; Mature: 18736
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQMKMFVPAVVFAALASASAWANNSDTAQPLEKIAPYPQAEKGMKRQVITLTPQQDES CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC TLKVELLIGQTLNVDCNQHRLGGTLETKTLEGWGYDYYVFDNVTSPVSTMMACPEGKKEQ EEEEEEEECCEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCC KFVTAWLGEDGMLRYNSKLPIVVYTPANVDVKYRIWKADANVQNAVAR EEEEEEECCCCEEEECCCCCEEEECCCCCEEEEEEEECCCCHHHHHCC >Mature Secondary Structure MNNQMKMFVPAVVFAALASASAWANNSDTAQPLEKIAPYPQAEKGMKRQVITLTPQQDES CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC TLKVELLIGQTLNVDCNQHRLGGTLETKTLEGWGYDYYVFDNVTSPVSTMMACPEGKKEQ EEEEEEEECCEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCCC KFVTAWLGEDGMLRYNSKLPIVVYTPANVDVKYRIWKADANVQNAVAR EEEEEEECCCCEEEECCCCCEEEECCCCCEEEEEEEECCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA