| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is rcsD [H]
Identifier: 194735763
GI number: 194735763
Start: 2373086
End: 2375755
Strand: Direct
Name: rcsD [H]
Synonym: SeSA_A2495
Alternate gene names: 194735763
Gene position: 2373086-2375755 (Clockwise)
Preceding gene: 194736714
Following gene: 194733999
Centisome position: 50.39
GC content: 51.57
Gene sequence:
>2670_bases ATGAGTCAGTCTGACACAACGGTCTCTACCCGATTTTCCCTTCTACCGGGAAGCATTACCCGTTTCTTCTTATTGCTGAT CATTGTGCTGCTGGTAACGATGGGCGTTATGGTACAGAGCGCCGTCAACGCCTGGTTGAAAGACAAAAGCTATCAAATTG TCGATATCACCCACGCTATTCATAAACGCGTGGATACCTGGCGGTATGTTACCTGGCAAATTTATGACAACATCGCCGCG ACCACTACGCCATCGACAGGTGAAGGACTTCAGGAAACGCGTCTGAAGCAGGATGTGTATTATCTTGAAAAGCCGCGACG TAAAACTGAAGCGCTGATTTTCGGTTCCCATGACAGCGCCACGCTGGAAATGACGCAGCGTATGTCAACTTATCTGGATA CGCTGTGGGGCGCGGAAAACGTGCCGTGGTCCATGTATTACCTCAACGGACAGGATAACAGCCTGATTCTTATCTCTACC CTACCGTTGAAAGATCTCTCTTCCGGCTTTAAAGAGTCCACTATTGGCAATATCGTCGATTCCCGCCGGGCAGAGATGTT GCAGCAGGCGAATGCGCTGGATGAGCGCGAAAGTTTCTCCTCATTGCGAAAACTGGCCTGGCAAAACGGTCACTATTTTA CGCTGCGCACGACCTTCAATCAGCCAGGACATCTGGCAACCGTGGTGGCGTTTGATCTGCCCATTAATGATTTAATCCCG CCGGGAATGCCGCTGGACAGTTTTCGGATAGAGCCTGACGCAACCCAGGCGACGGGGCGAAGCAGTGAAAAGGAAGCGCC TGATAGCGTCACGATTAGCTTTAACGGTTCAAAAATTGAGATCTCCTCAGCGCTTAACTCTACCGGAATGCGCCTGATCT GGCAGGTACCGTTCGGTACGCTTTTGCTTGATACGTTGCAAAATATTTTGCTGCCTTTACTGCTGAACATCGGGCTGCTG GCGTTGGCGTTATTTGGCTACGCTACGTTCCGTCATCAGCCGGGACGGACGACGGAATCGACATCTGGCAACGCGGCGAA TAACGAGCTTCGCGTCTTACGCGCCATTAATGAAGAGATCGTTTCTCTGCTGCCGCTGGGTCTGCTGGTCTACGATCAGG AAGGAAACCGCACCGTGATCAGCAATAAAATCGCCGATCATCTGTTGCCGCATCTTAACCTGCAAAATATTACCAGCATG GCGGAACAGCATCAGGGCGTGATTCAGGCGACAATTAATAACGAACTGTATGAGATCCGTCTGTTTCGCAGCCAGATCGC CCCCCGCACGCAGATCTTTATTATCCGCGATCAGGACCGGGAAGTGCTGGTGAATAAGAAGCTTAAACAGGCGCAGCGTT TGTATGAGAAGAATCAGCAGGGCCGCGCCGCCTTTATGCAAAATATCAGCAACACGCTTAAAGAGCCCGTACGCCAACTG GCGGTTAACGCCGCGGCAGTCACCACGCCGGAAAGCCTGAAACTGGCGGATCAGGCGGATGTATTGGTACGTATGATCGA TGAAATCCAACTGGCGAATATGCTGGAAAATGACGCATGGAAGAGCGAAGCCACGCTGTTCTCCCTGCAGGATCTTATTG ACGAAGTCGTGCCGGAAGTACTGCCCGCCATTAAGCGTAAAGGGCTGCAACTGCTGATTAATAACCATCTTAGCGGCAAC GATGAACGCTGGGGCGATCGCGACGCCCTGCGCCGGATTTTGCTGCTGTTGATTCAGTATGCCGTCACGACGACCGCTAT GGGTAAAATTACGCTTGAAGTCGAGCAGGATGAATCTATCGCGGAGCGTCTGACTTTCCGTATTCTGGATACGGGCGAAG GCGTAACGTTAAACGAGATTGATAATCTGCATTTCCCGTATATGAATGAAACGCAGGGCGACCGTTACGGCAAAGCGAAT CCGCTCACCTTCTGGCTGTGCAATCAACTGGCGCGCAAACTGGGCGGTCATCTCAACATTAAAGCGCGGGAAACGCTGGG CACGCGCTATACCGTTCATGTCAAAATGCTTCCTCACGATCAGCATACTCAGGTCGAAGAGCGTCTGCTGGACGACGTGA GCGTGATGGTCGATGTGACGTCCAACGAGGTTCGCGCGATTGTGCTGCGTCAGTTAGAAAACTGGGGCGCCACCTGCATC ACGCCGGATGAAAGGCAGATAAGTCAAGAATATGATCTCTTTTTAACGGATAATCCGTCTAATCTTACTGCCTCGGGCTT GCTTTTAAGCGATGATGAGTCAGGCGTGCGGAAAATTGGCCCGGGTCAGTTGCGCGTCAACTTTAATATGAGCAATGCTA TGCAGGAAGCTGTACTACAACTTATCGAAGAGCAGCTGGCGCAGGAAGAGATTCCCGCCTCCCCGCTCGGCGGAGATGAA AATGCCGAGCTTCATGCCAGCGGCTATTATGCGCTATTTGTAGACACAGTACCGGATGATGTTAAGAGGTTGTATACTGA GGCGGCAACCAGCGATTTCGCTGCGCTGGCCCAAACGGCCCACCGCCTGAAAGGGGTGTTTGCCATGCTTAATCTGGTAC CCGGCAAGCAGTTATGTGAAACGCTGGAACATCTGATTCGTGAGAAAGATGCTCCAGGTATAGAAAAATATATCAGCGAC ATTGACGCCTACGTCAAAAGCTTGCTGTAG
Upstream 100 bases:
>100_bases TGTTAAGTTGCCCGGCATGACGTAAGAGTCTGGAAATTCATTCATTACCCTTTATACTGCCCTTCACCTTCAGCGTTGCT TTTACAGGTCGTAAACATAA
Downstream 100 bases:
>100_bases CAAGGTAGCCCAATACATGAACAATATGAACGTAATTATTGCCGATGACCACCCGATTGTACTGTTCGGTATTCGCAAAT CACTTGAACAAATCGAGTGG
Product: phosphotransfer intermediate protein in two-component regulatory system with RcsBC
Products: NA
Alternate protein names: Phosphotransfer intermediate RcsD [H]
Number of amino acids: Translated: 889; Mature: 888
Protein sequence:
>889_residues MSQSDTTVSTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIHKRVDTWRYVTWQIYDNIAA TTTPSTGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDSATLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLILIST LPLKDLSSGFKESTIGNIVDSRRAEMLQQANALDERESFSSLRKLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP PGMPLDSFRIEPDATQATGRSSEKEAPDSVTISFNGSKIEISSALNSTGMRLIWQVPFGTLLLDTLQNILLPLLLNIGLL ALALFGYATFRHQPGRTTESTSGNAANNELRVLRAINEEIVSLLPLGLLVYDQEGNRTVISNKIADHLLPHLNLQNITSM AEQHQGVIQATINNELYEIRLFRSQIAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRAAFMQNISNTLKEPVRQL AVNAAAVTTPESLKLADQADVLVRMIDEIQLANMLENDAWKSEATLFSLQDLIDEVVPEVLPAIKRKGLQLLINNHLSGN DERWGDRDALRRILLLLIQYAVTTTAMGKITLEVEQDESIAERLTFRILDTGEGVTLNEIDNLHFPYMNETQGDRYGKAN PLTFWLCNQLARKLGGHLNIKARETLGTRYTVHVKMLPHDQHTQVEERLLDDVSVMVDVTSNEVRAIVLRQLENWGATCI TPDERQISQEYDLFLTDNPSNLTASGLLLSDDESGVRKIGPGQLRVNFNMSNAMQEAVLQLIEEQLAQEEIPASPLGGDE NAELHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDAPGIEKYISD IDAYVKSLL
Sequences:
>Translated_889_residues MSQSDTTVSTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIHKRVDTWRYVTWQIYDNIAA TTTPSTGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDSATLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLILIST LPLKDLSSGFKESTIGNIVDSRRAEMLQQANALDERESFSSLRKLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP PGMPLDSFRIEPDATQATGRSSEKEAPDSVTISFNGSKIEISSALNSTGMRLIWQVPFGTLLLDTLQNILLPLLLNIGLL ALALFGYATFRHQPGRTTESTSGNAANNELRVLRAINEEIVSLLPLGLLVYDQEGNRTVISNKIADHLLPHLNLQNITSM AEQHQGVIQATINNELYEIRLFRSQIAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRAAFMQNISNTLKEPVRQL AVNAAAVTTPESLKLADQADVLVRMIDEIQLANMLENDAWKSEATLFSLQDLIDEVVPEVLPAIKRKGLQLLINNHLSGN DERWGDRDALRRILLLLIQYAVTTTAMGKITLEVEQDESIAERLTFRILDTGEGVTLNEIDNLHFPYMNETQGDRYGKAN PLTFWLCNQLARKLGGHLNIKARETLGTRYTVHVKMLPHDQHTQVEERLLDDVSVMVDVTSNEVRAIVLRQLENWGATCI TPDERQISQEYDLFLTDNPSNLTASGLLLSDDESGVRKIGPGQLRVNFNMSNAMQEAVLQLIEEQLAQEEIPASPLGGDE NAELHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDAPGIEKYISD IDAYVKSLL >Mature_888_residues SQSDTTVSTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIHKRVDTWRYVTWQIYDNIAAT TTPSTGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDSATLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLILISTL PLKDLSSGFKESTIGNIVDSRRAEMLQQANALDERESFSSLRKLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIPP GMPLDSFRIEPDATQATGRSSEKEAPDSVTISFNGSKIEISSALNSTGMRLIWQVPFGTLLLDTLQNILLPLLLNIGLLA LALFGYATFRHQPGRTTESTSGNAANNELRVLRAINEEIVSLLPLGLLVYDQEGNRTVISNKIADHLLPHLNLQNITSMA EQHQGVIQATINNELYEIRLFRSQIAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRAAFMQNISNTLKEPVRQLA VNAAAVTTPESLKLADQADVLVRMIDEIQLANMLENDAWKSEATLFSLQDLIDEVVPEVLPAIKRKGLQLLINNHLSGND ERWGDRDALRRILLLLIQYAVTTTAMGKITLEVEQDESIAERLTFRILDTGEGVTLNEIDNLHFPYMNETQGDRYGKANP LTFWLCNQLARKLGGHLNIKARETLGTRYTVHVKMLPHDQHTQVEERLLDDVSVMVDVTSNEVRAIVLRQLENWGATCIT PDERQISQEYDLFLTDNPSNLTASGLLLSDDESGVRKIGPGQLRVNFNMSNAMQEAVLQLIEEQLAQEEIPASPLGGDEN AELHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDAPGIEKYISDI DAYVKSLL
Specific function: May serves as a phosphotransfer intermediate between RcsC and RcsB. It may acquire a phosphoryl group at His-842 from RcsC 'Asp-866' and transmit it to 'Asp-56' of RcsB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788545, Length=890, Percent_Identity=84.7191011235955, Blast_Score=1499, Evalue=0.0, Organism=Escherichia coli, GI145693157, Length=408, Percent_Identity=23.0392156862745, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR008207 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 99825; Mature: 99694
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSDTTVSTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAI CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH HKRVDTWRYVTWQIYDNIAATTTPSTGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDSA HHHCCHHEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH TLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLILISTLPLKDLSSGFKESTIGNIVD HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHH SRRAEMLQQANALDERESFSSLRKLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCHHHCCC PGMPLDSFRIEPDATQATGRSSEKEAPDSVTISFNGSKIEISSALNSTGMRLIWQVPFGT CCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHCCCCCEEEEECCHHH LLLDTLQNILLPLLLNIGLLALALFGYATFRHQPGRTTESTSGNAANNELRVLRAINEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VSLLPLGLLVYDQEGNRTVISNKIADHLLPHLNLQNITSMAEQHQGVIQATINNELYEIR HHHHCCCEEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCEEEEE LFRSQIAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRAAFMQNISNTLKEPVRQL EHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AVNAAAVTTPESLKLADQADVLVRMIDEIQLANMLENDAWKSEATLFSLQDLIDEVVPEV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LPAIKRKGLQLLINNHLSGNDERWGDRDALRRILLLLIQYAVTTTAMGKITLEVEQDESI HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECEEEEEECCCHHH AERLTFRILDTGEGVTLNEIDNLHFPYMNETQGDRYGKANPLTFWLCNQLARKLGGHLNI HHHHEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE KARETLGTRYTVHVKMLPHDQHTQVEERLLDDVSVMVDVTSNEVRAIVLRQLENWGATCI EEHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCEEE TPDERQISQEYDLFLTDNPSNLTASGLLLSDDESGVRKIGPGQLRVNFNMSNAMQEAVLQ CCCHHHHHCCCCEEEECCCCCCEECCEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHH LIEEQLAQEEIPASPLGGDENAELHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTA HHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH HRLKGVFAMLNLVPGKQLCETLEHLIREKDAPGIEKYISDIDAYVKSLL HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure SQSDTTVSTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAI CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH HKRVDTWRYVTWQIYDNIAATTTPSTGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDSA HHHCCHHEEEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH TLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLILISTLPLKDLSSGFKESTIGNIVD HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHH SRRAEMLQQANALDERESFSSLRKLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCHHHCCC PGMPLDSFRIEPDATQATGRSSEKEAPDSVTISFNGSKIEISSALNSTGMRLIWQVPFGT CCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHCCCCCEEEEECCHHH LLLDTLQNILLPLLLNIGLLALALFGYATFRHQPGRTTESTSGNAANNELRVLRAINEEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VSLLPLGLLVYDQEGNRTVISNKIADHLLPHLNLQNITSMAEQHQGVIQATINNELYEIR HHHHCCCEEEEECCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCEEEEE LFRSQIAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRAAFMQNISNTLKEPVRQL EHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AVNAAAVTTPESLKLADQADVLVRMIDEIQLANMLENDAWKSEATLFSLQDLIDEVVPEV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH LPAIKRKGLQLLINNHLSGNDERWGDRDALRRILLLLIQYAVTTTAMGKITLEVEQDESI HHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECEEEEEECCCHHH AERLTFRILDTGEGVTLNEIDNLHFPYMNETQGDRYGKANPLTFWLCNQLARKLGGHLNI HHHHEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE KARETLGTRYTVHVKMLPHDQHTQVEERLLDDVSVMVDVTSNEVRAIVLRQLENWGATCI EEHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCEEE TPDERQISQEYDLFLTDNPSNLTASGLLLSDDESGVRKIGPGQLRVNFNMSNAMQEAVLQ CCCHHHHHCCCCEEEECCCCCCEECCEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHH LIEEQLAQEEIPASPLGGDENAELHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTA HHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH HRLKGVFAMLNLVPGKQLCETLEHLIREKDAPGIEKYISDIDAYVKSLL HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2404948; 7984428; 11758943; 11309126 [H]