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The map label for this gene is etfB [H]

Identifier: 194736689

GI number: 194736689

Start: 979844

End: 980593

Strand: Direct

Name: etfB [H]

Synonym: SeSA_A1006

Alternate gene names: 194736689

Gene position: 979844-980593 (Clockwise)

Preceding gene: 194735322

Following gene: 194737170

Centisome position: 20.81

GC content: 37.47

Gene sequence:

>750_bases
ATGAAAGCTTTAGTTTGTGTAAAACAAGTTGTCGATCATAACGTTAGAATTAGAATAAAGCAAGATCATTCTGATGTTGA
TATTTCTGATTCAAAACTCAGTATCAATCCATTTGATGAAATTGCAGTTGAAGAAGCAGTACGTTTAAAAGAACGGGGAT
TAATCAGTGAGGTTGTTGTAGTGTCTATAGGAAACACAGGTGTAGGGGATGTATTGCGTACAGCACTGGCAGCAGGGGCA
GACAGGGCAATACACATATTAACAAAAAACTCTCTTACACCACTAATTGTGGCCAAAACTATCACCGCTATTACCCGGAA
TGAAAAACCCGATATTATATTATTAGGCAAGCAAGCTATTGACGATGATTGTAATCAGGTAGGCCAAATGCTGGCAGCAT
TACTCGATCTTCCCCAAGCCACTAATGTTAGTGAAATTACTATTTCTGATAATTCATTAACTGCTGTTCGTGAGGTTGAT
GGAGGATTAGAAACGTTAAATTTATCCCTGCCTGCAGTACTCACTACAGATCTACGTCTGAATACACCGAGGAATATCAG
CTTGCCGAATGTTATTAAAGCCAAAAAGAAACCTGTTAAGGAGATAGATTTCGATTCACTTGGTATTAACCCGTCATCCA
GATTGACTATTATTAAAGTTGATGAGCCAGCAAGAAGGAAAGCAGGCATAATCGTTCCAGATATTAACACGCTGCTAGAT
AAATTAAAAAACGAAGAAAAAGTAATTTAA

Upstream 100 bases:

>100_bases
GCGTTTAGTCATGAAGGGCAAATGGTGGATAAACCGTTACTGGAAAAAGCAAAAAGGATTTTGGCTCATAGCATTTAGTA
AATATATGAAGGAGTCACCA

Downstream 100 bases:

>100_bases
GGAGAAAAATATGGCTTCTTTAGTTATTGCTGAACATAACGGCAATACTCTTTTACCTTCAACACTCAGTACTATCACTG
CGGCAAAAGCCATTAATAGT

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKALVCVKQVVDHNVRIRIKQDHSDVDISDSKLSINPFDEIAVEEAVRLKERGLISEVVVVSIGNTGVGDVLRTALAAGA
DRAIHILTKNSLTPLIVAKTITAITRNEKPDIILLGKQAIDDDCNQVGQMLAALLDLPQATNVSEITISDNSLTAVREVD
GGLETLNLSLPAVLTTDLRLNTPRNISLPNVIKAKKKPVKEIDFDSLGINPSSRLTIIKVDEPARRKAGIIVPDINTLLD
KLKNEEKVI

Sequences:

>Translated_249_residues
MKALVCVKQVVDHNVRIRIKQDHSDVDISDSKLSINPFDEIAVEEAVRLKERGLISEVVVVSIGNTGVGDVLRTALAAGA
DRAIHILTKNSLTPLIVAKTITAITRNEKPDIILLGKQAIDDDCNQVGQMLAALLDLPQATNVSEITISDNSLTAVREVD
GGLETLNLSLPAVLTTDLRLNTPRNISLPNVIKAKKKPVKEIDFDSLGINPSSRLTIIKVDEPARRKAGIIVPDINTLLD
KLKNEEKVI
>Mature_249_residues
MKALVCVKQVVDHNVRIRIKQDHSDVDISDSKLSINPFDEIAVEEAVRLKERGLISEVVVVSIGNTGVGDVLRTALAAGA
DRAIHILTKNSLTPLIVAKTITAITRNEKPDIILLGKQAIDDDCNQVGQMLAALLDLPQATNVSEITISDNSLTAVREVD
GGLETLNLSLPAVLTTDLRLNTPRNISLPNVIKAKKKPVKEIDFDSLGINPSSRLTIIKVDEPARRKAGIIVPDINTLLD
KLKNEEKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=248, Percent_Identity=50.4032258064516, Blast_Score=243, Evalue=1e-64,
Organism=Homo sapiens, GI62420877, Length=233, Percent_Identity=50.6437768240343, Blast_Score=226, Evalue=1e-59,
Organism=Escherichia coli, GI87081682, Length=232, Percent_Identity=27.1551724137931, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI2367123, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=250, Percent_Identity=46.4, Blast_Score=216, Evalue=8e-57,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=44, Blast_Score=204, Evalue=9e-54,
Organism=Drosophila melanogaster, GI24651147, Length=247, Percent_Identity=49.3927125506073, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24651145, Length=247, Percent_Identity=49.3927125506073, Blast_Score=223, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27020; Mature: 27020

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVCVKQVVDHNVRIRIKQDHSDVDISDSKLSINPFDEIAVEEAVRLKERGLISEVVV
CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGNTGVGDVLRTALAAGADRAIHILTKNSLTPLIVAKTITAITRNEKPDIILLGKQAI
EEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCHHC
DDDCNQVGQMLAALLDLPQATNVSEITISDNSLTAVREVDGGLETLNLSLPAVLTTDLRL
CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHCCCEEEEEEECCEEEEECEEE
NTPRNISLPNVIKAKKKPVKEIDFDSLGINPSSRLTIIKVDEPARRKAGIIVPDINTLLD
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCEEECCHHHHHH
KLKNEEKVI
HHCCCCCCC
>Mature Secondary Structure
MKALVCVKQVVDHNVRIRIKQDHSDVDISDSKLSINPFDEIAVEEAVRLKERGLISEVVV
CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGNTGVGDVLRTALAAGADRAIHILTKNSLTPLIVAKTITAITRNEKPDIILLGKQAI
EEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCHHC
DDDCNQVGQMLAALLDLPQATNVSEITISDNSLTAVREVDGGLETLNLSLPAVLTTDLRL
CHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHCCCEEEEEEECCEEEEECEEE
NTPRNISLPNVIKAKKKPVKEIDFDSLGINPSSRLTIIKVDEPARRKAGIIVPDINTLLD
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCEEECCHHHHHH
KLKNEEKVI
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]