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The map label for this gene is yhjY [H]

Identifier: 194736179

GI number: 194736179

Start: 3706472

End: 3707176

Strand: Reverse

Name: yhjY [H]

Synonym: SeSA_A3836

Alternate gene names: 194736179

Gene position: 3707176-3706472 (Counterclockwise)

Preceding gene: 194737074

Following gene: 194736604

Centisome position: 78.72

GC content: 54.61

Gene sequence:

>705_bases
ATGATTGTAAGAAAACGCCGTGGTCGCCGGACATTGCGTTGTCTGGCGGGCCTTATGGCCTGCTCGTTTTTTATCAATAC
CACGTATGCCTGGCAACAAGAATATATCGCTGAAGCGGCTCCGGGGCATACGACGGAACGCTATACCTGGGACAGCGATC
ACCAACCGAATTACAACGACATACTGGCCGAACGTATTCAGTCTACGCAAAATACGGTGGGTCCGGTGCTTAGCCTGGCG
GATGAAACCCCGCTTGATGCGACCAGCGGTATCAGTATGGGCTGGAATTTTCCGCTTTCCCGACGCGTGACCACTGGGCC
GGTCGCGGCGCTGCATTACGACGGTTCGACGTCATCAATGTATAACGAATATGGCGATAGCGCGACGACATTAGCGCTTA
CCGATCCGTTATGGCACGCCAGCGTCAGTACGTTAGGCTGGCGGGTAAACTCGCAGTTCGGCGATGTCCGTCCCTGGGCG
CAAATCAGCTATAACCAACAGTTTGGGGAAAATATCTGGAAAGCGCAGTCCGGGTTGAGTCGTATGACCGCAGGAAATCA
GGCGGGAAACTGGTTGGATGTCACCGTAGGCGCGGACGTGTTACTTAACCCGCACATGGCGGCGTATGCGGCGTTTTCCC
AGGCGGAAAATAGCGCTACGGATAGCGATTATTTGTATACCCTGGGGGTGAGCGCTCGCTTTTAA

Upstream 100 bases:

>100_bases
CCCGCTAAAAGGACAATAGTTAATACAGGGCTGATGCCCGACATCCTTCATTCAATGACAATAATATCGCCGAATTCGGC
TCTACTCTGGAGTCGCGTTG

Downstream 100 bases:

>100_bases
CGAGATAAACCGCCGCCTGGACTTATTAGAAGTTCATCTAATACCCTGTCTATATATTTACAAAAATATATAGGTCAATC
ACATTCTCTATAGACACTTT

Product: putative lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIVRKRRGRRTLRCLAGLMACSFFINTTYAWQQEYIAEAAPGHTTERYTWDSDHQPNYNDILAERIQSTQNTVGPVLSLA
DETPLDATSGISMGWNFPLSRRVTTGPVAALHYDGSTSSMYNEYGDSATTLALTDPLWHASVSTLGWRVNSQFGDVRPWA
QISYNQQFGENIWKAQSGLSRMTAGNQAGNWLDVTVGADVLLNPHMAAYAAFSQAENSATDSDYLYTLGVSARF

Sequences:

>Translated_234_residues
MIVRKRRGRRTLRCLAGLMACSFFINTTYAWQQEYIAEAAPGHTTERYTWDSDHQPNYNDILAERIQSTQNTVGPVLSLA
DETPLDATSGISMGWNFPLSRRVTTGPVAALHYDGSTSSMYNEYGDSATTLALTDPLWHASVSTLGWRVNSQFGDVRPWA
QISYNQQFGENIWKAQSGLSRMTAGNQAGNWLDVTVGADVLLNPHMAAYAAFSQAENSATDSDYLYTLGVSARF
>Mature_234_residues
MIVRKRRGRRTLRCLAGLMACSFFINTTYAWQQEYIAEAAPGHTTERYTWDSDHQPNYNDILAERIQSTQNTVGPVLSLA
DETPLDATSGISMGWNFPLSRRVTTGPVAALHYDGSTSSMYNEYGDSATTLALTDPLWHASVSTLGWRVNSQFGDVRPWA
QISYNQQFGENIWKAQSGLSRMTAGNQAGNWLDVTVGADVLLNPHMAAYAAFSQAENSATDSDYLYTLGVSARF

Specific function: Unknown

COG id: COG5571

COG function: function code N; Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI87082287, Length=234, Percent_Identity=72.6495726495726, Blast_Score=363, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR016955 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 25894; Mature: 25894

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRKRRGRRTLRCLAGLMACSFFINTTYAWQQEYIAEAAPGHTTERYTWDSDHQPNYND
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHH
ILAERIQSTQNTVGPVLSLADETPLDATSGISMGWNFPLSRRVTTGPVAALHYDGSTSSM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHH
YNEYGDSATTLALTDPLWHASVSTLGWRVNSQFGDVRPWAQISYNQQFGENIWKAQSGLS
HHHHCCCEEEEEEECCHHHHHHHHHEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH
RMTAGNQAGNWLDVTVGADVLLNPHMAAYAAFSQAENSATDSDYLYTLGVSARF
HHHCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIVRKRRGRRTLRCLAGLMACSFFINTTYAWQQEYIAEAAPGHTTERYTWDSDHQPNYND
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHH
ILAERIQSTQNTVGPVLSLADETPLDATSGISMGWNFPLSRRVTTGPVAALHYDGSTSSM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHH
YNEYGDSATTLALTDPLWHASVSTLGWRVNSQFGDVRPWAQISYNQQFGENIWKAQSGLS
HHHHCCCEEEEEEECCHHHHHHHHHEEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHH
RMTAGNQAGNWLDVTVGADVLLNPHMAAYAAFSQAENSATDSDYLYTLGVSARF
HHHCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]