| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is wza [H]
Identifier: 194736033
GI number: 194736033
Start: 2223055
End: 2224110
Strand: Reverse
Name: wza [H]
Synonym: SeSA_A2351
Alternate gene names: 194736033
Gene position: 2224110-2223055 (Counterclockwise)
Preceding gene: 194735691
Following gene: 194737610
Centisome position: 47.23
GC content: 54.73
Gene sequence:
>1056_bases ATGTCTACGATGGGGAAAGATGTGATCAAACAGCAAGACGCTGACTTTGATCTCGACCGGATGGTCAATGTGTATCCGCT GACGCCACGGTTGGTTGAGCAATTACGCCCGCGGCCCAATGTCGCGCAACCGAATATGTCGCTGGACCAGGAGATCGCCA GCTATCAGTATCGCGTCGGGCCTGGCGATGTGCTGAATGTCACCGTCTGGGATCACCCGGAATTGACCACGCCAGCAGGC CAGTACCGTAGCTCAAGCGATACCGGCAACTGGGTACAGCCGGACGGCACCATGTTTTATCCCTACATTGGCAAGGTTAG CGTCGTCGGTAAAACTTTGTCAGAGATTCGCAGCGATATTACCGGGCGTTTAGCGAAGTACATCGCGGACCCGCAGGTGG ATGTCAATATCGCCGCTTTCCGCTCGCAAAAAGCGTACATCTCCGGCCAGGTGAATAAATCCGGTCAGCAGGCCATTACT AACGTACCGCTAACCGTCCTGGATGCGATTAACGCTGCGGGCGGCCTGACCGATATGGCGGACTGGCGCAACGTCGTGTT GACGCACAACGGCAAAGAACAGCGCATTTCGCTACAGGCGCTAATGCAAAATGGCGATCTTAGCCAGAACCGCTTGCTCT ACCCTGGCGACATTCTGTATGTGCCGCGCAATGACGATCTGAAAGTCTTTGTCATGGGCGAAGTGAAAAAACAGAGCACC CTCAAAATGGATTTCAGCGGCATGACGCTCACCGAAGCATTAGGCAATGCGGAAGGCATCGATCTGACCACCTCCAACGC CAGCGGCATTTTTGTGATTCGTCCGTTGAAAGGCGAGGGGGGACGCGGCGGCAAGATCGCCAATATCTACCAGCTTGATA TGTCTGACGCCACGTCATTGGTGATGGCGACGGAATTCCGACTTCAGCCTTACGATGTGGTGTACGTCACGACCGCGCCG GTTGCTCGCTGGAACCGTCTGATCAATCAGTTGCTGCCAACCATTAGCGGTGTCCGTTATATGACGGATACGGCCAGCGA CATTCATTCCTGGTAA
Upstream 100 bases:
>100_bases AAGTGATAAATAATCAATGATGAAATCCAAAATGAAATTGATGCCATTATTGGCGTCGCTCAGCTTGATAAGTGGTTGCA CAGTACTTCCGGGCAGCAAT
Downstream 100 bases:
>100_bases TCGTTATGTTTAACAAAATCTTAGTGGTCTGTGTGGGGAATGTTTGCCGTTCCCCGACGGCGGAACGTTTGCTAAAACGC TTTCATCCCTCGCTGACGGT
Product: polysaccharide biosynthesis/export protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSTMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVLNVTVWDHPELTTPAG QYRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAIT NVPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQST LKMDFSGMTLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAP VARWNRLINQLLPTISGVRYMTDTASDIHSW
Sequences:
>Translated_351_residues MSTMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVLNVTVWDHPELTTPAG QYRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAIT NVPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQST LKMDFSGMTLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAP VARWNRLINQLLPTISGVRYMTDTASDIHSW >Mature_350_residues STMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVGPGDVLNVTVWDHPELTTPAGQ YRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDITGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITN VPLTVLDAINAAGGLTDMADWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTL KMDFSGMTLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPV ARWNRLINQLLPTISGVRYMTDTASDIHSW
Specific function: Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium [H]
COG id: COG1596
COG function: function code M; Periplasmic protein involved in polysaccharide export
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BexD/CtrA/VexA family [H]
Homologues:
Organism=Escherichia coli, GI1788376, Length=351, Percent_Identity=94.3019943019943, Blast_Score=691, Evalue=0.0, Organism=Escherichia coli, GI1787218, Length=351, Percent_Identity=65.2421652421652, Blast_Score=491, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003715 - InterPro: IPR019554 [H]
Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]
EC number: NA
Molecular weight: Translated: 38770; Mature: 38638
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVG CCCCHHHHHHHCCCCCCHHHCEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHHHEEEECC PGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDI CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHH TGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTVLDAINAAGGLTDMA HHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHCCCCCCHH DWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQST CCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCEEEEEEECCCCCCE LKMDFSGMTLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSL EEEECCCCCHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEE VMATEFRLQPYDVVYVTTAPVARWNRLINQLLPTISGVRYMTDTASDIHSW EEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHCCC >Mature Secondary Structure STMGKDVIKQQDADFDLDRMVNVYPLTPRLVEQLRPRPNVAQPNMSLDQEIASYQYRVG CCCHHHHHHHCCCCCCHHHCEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHHHEEEECC PGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVSVVGKTLSEIRSDI CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHH TGRLAKYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTVLDAINAAGGLTDMA HHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHCCCHHHHHHHHHCCCCCCHH DWRNVVLTHNGKEQRISLQALMQNGDLSQNRLLYPGDILYVPRNDDLKVFVMGEVKKQST CCCEEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCEEEEEEECCCCCCE LKMDFSGMTLTEALGNAEGIDLTTSNASGIFVIRPLKGEGGRGGKIANIYQLDMSDATSL EEEECCCCCHHHHHCCCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEE VMATEFRLQPYDVVYVTTAPVARWNRLINQLLPTISGVRYMTDTASDIHSW EEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]