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The map label for this gene is fimA [H]

Identifier: 194735681

GI number: 194735681

Start: 1245490

End: 1246032

Strand: Reverse

Name: fimA [H]

Synonym: SeSA_A1273

Alternate gene names: 194735681

Gene position: 1246032-1245490 (Counterclockwise)

Preceding gene: 194735888

Following gene: 194737410

Centisome position: 26.46

GC content: 50.46

Gene sequence:

>543_bases
ATGAAAGGAAAATTTGCCGCTGCCGTATTATTCACCGCAATGGGGCTTGCTTCGACTGCAATGGCTCAGGATGGCCAGGT
TAATTTTACCGGCAAAATCATCGAAGCAGGTTGCAAAATTAACGGCAGTGTTACCAGCTCTCAGGATGTCAAGCTGGGCG
AGGTCTCTAAAACAGCGTTTACCGCCGCTGGCTCAACGGCAGCAACCACCAAGTTTTCATTGGTATTAACCGCCTGCCCT
GCAGATCTGCTGGGGAAACCGGTTTCCGTAAAATATGACGGTATGCCGGACACCCTGAATAACGACTATCTGCAAATTAC
CGGTTACGGTACTACCGGCGTCGCTAAAGGTGTCGCTATCCAGTTGTTGAATAGCGATACCAGCGAACTGCCGCTGGGTA
CTGAGTCTAAATCCGTTACCATTGCCTCCGATGCGGCAGAAGAAACGAACCTCGACTTTTTCGCCCGTTATATCGCGACA
GAAGATAGCGTATCAGGCGGCGATGCCAACGGCGTCGTTAACTTTACCCTGACCTACAACTAA

Upstream 100 bases:

>100_bases
CAATTAGAAAGTCATAATTAATATATTTATTACTCAAAGCCTATTTATCGTGCGCTGAGTAATATCTACGTATCGAGTCG
ACCATGAAAGGACATTTTTA

Downstream 100 bases:

>100_bases
TCGCGCGGAATTTATTCTCTCGTTTTAGTAAACCAATAAAGCCGGATGGACCCGGCTTTGCTTTGGAGATACTCCATGAA
TAAATATAGTTTACTCACTG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKGKFAAAVLFTAMGLASTAMAQDGQVNFTGKIIEAGCKINGSVTSSQDVKLGEVSKTAFTAAGSTAATTKFSLVLTACP
ADLLGKPVSVKYDGMPDTLNNDYLQITGYGTTGVAKGVAIQLLNSDTSELPLGTESKSVTIASDAAEETNLDFFARYIAT
EDSVSGGDANGVVNFTLTYN

Sequences:

>Translated_180_residues
MKGKFAAAVLFTAMGLASTAMAQDGQVNFTGKIIEAGCKINGSVTSSQDVKLGEVSKTAFTAAGSTAATTKFSLVLTACP
ADLLGKPVSVKYDGMPDTLNNDYLQITGYGTTGVAKGVAIQLLNSDTSELPLGTESKSVTIASDAAEETNLDFFARYIAT
EDSVSGGDANGVVNFTLTYN
>Mature_180_residues
MKGKFAAAVLFTAMGLASTAMAQDGQVNFTGKIIEAGCKINGSVTSSQDVKLGEVSKTAFTAAGSTAATTKFSLVLTACP
ADLLGKPVSVKYDGMPDTLNNDYLQITGYGTTGVAKGVAIQLLNSDTSELPLGTESKSVTIASDAAEETNLDFFARYIAT
EDSVSGGDANGVVNFTLTYN

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1790773, Length=166, Percent_Identity=29.5180722891566, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI87082421, Length=155, Percent_Identity=29.6774193548387, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786746, Length=174, Percent_Identity=30.4597701149425, Blast_Score=64, Evalue=4e-12,
Organism=Escherichia coli, GI1787174, Length=186, Percent_Identity=27.4193548387097, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87081753, Length=161, Percent_Identity=30.4347826086957, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18503; Mature: 18503

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKFAAAVLFTAMGLASTAMAQDGQVNFTGKIIEAGCKINGSVTSSQDVKLGEVSKTAF
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEECCCCCCCCCCEECCCCCEEE
TAAGSTAATTKFSLVLTACPADLLGKPVSVKYDGMPDTLNNDYLQITGYGTTGVAKGVAI
EECCCCCCCEEEEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEE
QLLNSDTSELPLGTESKSVTIASDAAEETNLDFFARYIATEDSVSGGDANGVVNFTLTYN
EEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKGKFAAAVLFTAMGLASTAMAQDGQVNFTGKIIEAGCKINGSVTSSQDVKLGEVSKTAF
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEECCCCCCCCCCEECCCCCEEE
TAAGSTAATTKFSLVLTACPADLLGKPVSVKYDGMPDTLNNDYLQITGYGTTGVAKGVAI
EECCCCCCCEEEEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEE
QLLNSDTSELPLGTESKSVTIASDAAEETNLDFFARYIATEDSVSGGDANGVVNFTLTYN
EEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1982455 [H]