Click here to switch to the map view.

The map label for this gene is yliI [H]

Identifier: 194735646

GI number: 194735646

Start: 987080

End: 987760

Strand: Direct

Name: yliI [H]

Synonym: SeSA_A1013

Alternate gene names: 194735646

Gene position: 987080-987760 (Clockwise)

Preceding gene: 194737505

Following gene: 194735164

Centisome position: 20.96

GC content: 54.04

Gene sequence:

>681_bases
ATGGCTAAAGTCGATGTGAAATGCCCGTTTTGCGCGCAAACGGCATCCGTTAAAAAGTATGGTCCGGGGAGTGCAGGGCA
CCAGCATTACCGCTGTCAGGCATGTTGCCGCAGCTTTCAGGTCGACTATGAATACCGCGCCTGTCAGCCCGGCATGAAAG
GGCAGGTTGTTGATCTTGCCATGTACAATGCCGGTATTCGTAATCCGCAGGGGCTGGCCATCAATCCCTGGAGCGGCGCG
CTATGGCTGCATGAACACGGTCCGCGCGGCGGCGATGAAATTAACATCCCGGAAAAAGGCAAAAATTATGGCTGGCCGCT
GGCCACATGGGGCGTCAACTATAGTGGTCTAAAAGTGCCGGAAGCCAAAGGTGAAATTGTCGAAGGAACGGAGCAACCGG
TTTACTACTTGAAGGATTCTCCGGCGATCAGCGGGATGGCTTTTTATGCCAGCGACGTTTTTGCGCCGTGGCGGCACAAA
CTGTTTATCGGCGCGCTAAAAGATAAAGAGGTCATTGTGATGCGCGTCGATGGCAATACGGTGACGGAAGAAGGCCGTAT
TCTGGGTGACAGAAAGCAGCGTATTCGGGATGTGCGTGTCGGACCTGACGGCTACTTATATGTGTTAACCGATGAGTCCG
ACGGGCAGTTACTCAAGGTAAGTCCTGCAGCCACGCGTTAG

Upstream 100 bases:

>100_bases
GAGTAAACCATCATGACATGCAGTGAAATCCCCAGAAAACGATCATGTATTCAATCGTTGATTATCGTTTCGAATACCGA
CTTTTATCGCAGGATTTATG

Downstream 100 bases:

>100_bases
GTCACCGGGATCATCACCACTTTGCGAAAAGCAGGGCGCTCGGTAAGCTGTTGATACCAGCGTTCCAGATTCGGGCGCGG
CGTCCATTTCAGACCCACGT

Product: putative dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MAKVDVKCPFCAQTASVKKYGPGSAGHQHYRCQACCRSFQVDYEYRACQPGMKGQVVDLAMYNAGIRNPQGLAINPWSGA
LWLHEHGPRGGDEINIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYLKDSPAISGMAFYASDVFAPWRHK
LFIGALKDKEVIVMRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR

Sequences:

>Translated_226_residues
MAKVDVKCPFCAQTASVKKYGPGSAGHQHYRCQACCRSFQVDYEYRACQPGMKGQVVDLAMYNAGIRNPQGLAINPWSGA
LWLHEHGPRGGDEINIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYLKDSPAISGMAFYASDVFAPWRHK
LFIGALKDKEVIVMRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR
>Mature_225_residues
AKVDVKCPFCAQTASVKKYGPGSAGHQHYRCQACCRSFQVDYEYRACQPGMKGQVVDLAMYNAGIRNPQGLAINPWSGAL
WLHEHGPRGGDEINIPEKGKNYGWPLATWGVNYSGLKVPEAKGEIVEGTEQPVYYLKDSPAISGMAFYASDVFAPWRHKL
FIGALKDKEVIVMRVDGNTVTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=162, Percent_Identity=79.6296296296296, Blast_Score=278, Evalue=2e-76,
Organism=Escherichia coli, GI1790747, Length=67, Percent_Identity=38.8059701492537, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1789852, Length=67, Percent_Identity=40.2985074626866, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788204, Length=67, Percent_Identity=40.2985074626866, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1786204, Length=67, Percent_Identity=40.2985074626866, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87081814, Length=67, Percent_Identity=40.2985074626866, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786471, Length=67, Percent_Identity=40.2985074626866, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786460, Length=67, Percent_Identity=40.2985074626866, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 24997; Mature: 24866

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVDVKCPFCAQTASVKKYGPGSAGHQHYRCQACCRSFQVDYEYRACQPGMKGQVVDLA
CCEEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCEEEEE
MYNAGIRNPQGLAINPWSGALWLHEHGPRGGDEINIPEKGKNYGWPLATWGVNYSGLKVP
EECCCCCCCCCCEECCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEECCCCCCCEECC
EAKGEIVEGTEQPVYYLKDSPAISGMAFYASDVFAPWRHKLFIGALKDKEVIVMRVDGNT
CCCCCEECCCCCCEEEEECCCCCCEEEEEHHHCCCCCCEEEEEEEECCCEEEEEEECCCE
VTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR
ECCCCEEECCHHHHHEEEEECCCCEEEEEEECCCCCEEEECCCCCC
>Mature Secondary Structure 
AKVDVKCPFCAQTASVKKYGPGSAGHQHYRCQACCRSFQVDYEYRACQPGMKGQVVDLA
CEEECCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCEEEEE
MYNAGIRNPQGLAINPWSGALWLHEHGPRGGDEINIPEKGKNYGWPLATWGVNYSGLKVP
EECCCCCCCCCCEECCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEECCCCCCCEECC
EAKGEIVEGTEQPVYYLKDSPAISGMAFYASDVFAPWRHKLFIGALKDKEVIVMRVDGNT
CCCCCEECCCCCCEEEEECCCCCCEEEEEHHHCCCCCCEEEEEEEECCCEEEEEEECCCE
VTEEGRILGDRKQRIRDVRVGPDGYLYVLTDESDGQLLKVSPAATR
ECCCCEEECCHHHHHEEEEECCCCEEEEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]