| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is ugd [H]
Identifier: 194735251
GI number: 194735251
Start: 2177236
End: 2178402
Strand: Reverse
Name: ugd [H]
Synonym: SeSA_A2308
Alternate gene names: 194735251
Gene position: 2178402-2177236 (Counterclockwise)
Preceding gene: 194737009
Following gene: 194735784
Centisome position: 46.26
GC content: 43.87
Gene sequence:
>1167_bases ATGAAAATCACGATATCCGGGACGGGTTATGTTGGCTTGTCTAATGGTTTGCTTATTGCACAACATCATGATGTGGTGGC ATTAGACATTGTTCCTTCCCGTGTTGAACTGTTAAATGATCGGATATCTCCGATTGTTGATAAAGAAATTCAGCAATTTT TAAAGGAAGATAACATCAGATTCAGGGCAACGCTGGATAAGTTTGATGCGTACCAGAATGCAGATTACGTCATCATTGCT ACGCCTACAGATTACGATCCAAAAACCAACTATTTTGATACGTCCAGTGTGGAATCGGTCATTCAGGATGTGATCAGCTT CAACCCCGCAGCCGTGATGATTATTAAGTCTACGGTGCCGGTTGGCTTCACGGCAGCAATGCGCCAGAAGTTTGCGACAG AAAATATCATTTTCTCTCCGGAGTTTTTACGTGAAGGTAAGGCCCTTTACGATAACCTTTATCCCTCCCGTATCGTGATT GGGGAACAGTCTGAGCGCGCCAGAGAATTTGCCGCATTACTCCAGGAAGGCGCTATTAAACAGGAGATTCCGACGCTGTT TACGGACTCCACTGAAGCGGAAGCCATTAAACTTTTCGCCAATACTTATCTCGCTATGCGAGTCGCTTATTTTAATGAAT TAGACAGCTATGCTGAAACGTTAGGGTTAAATACCCGACAAATTATTGAAGGGGTATGCCTCGACCCGCGTATTGGCAAT CATTATAATAATCCCTCTTTTGGTTATGGCGGATATTGTTTGCCAAAAGATACCAAACAGTTGCTGGCTAATTATCAGTC GGTGCCTAATAATATTATCTCCGCTATCGTTGAAGCAAACCGTACGCGTAAAGATTTTATTGCCGACGCTATCCTCGCCA GAAAGCCTAAAGTGGTGGGCATTTATCGCCTGATTATGAAGAGTGGCTCCGATAACTTCCGCGCCTCATCGATTCAGGGG ATTATGAAACGTATTAAAGCGAAAGGCGTAGAGGTCATTATCTATGAGCCGGTAATGGAAGAAGATACTTTCTTCAACTC TCGCCTTGAGCGTGATTTGCACTGCTTTAAACAGCAGGCGGATGTCATTATTTCCAACAGGATGGCGGCAGATCTTTTGG ATGTCGCTGAAAAAGTGTATACCCGCGATCTTTTCGGTAGTGATTAA
Upstream 100 bases:
>100_bases CTGCGTTGCACTTTATATACTCAGGCGTTAAAACTTTAATATCTTATCAGGATGCGAAATACATCATGATTCATAATTAA GTTAATTCTGAGAGCGAATA
Downstream 100 bases:
>100_bases TAAGGCAATCGGGGCTGATGAGTCCCGATGATTTATTGACCAAATGGAAATAATGTCTGATTTTTATCATTAATCCTATG GCATATATTTGCTTTATGAC
Product: UDP-glucose 6-dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKITISGTGYVGLSNGLLIAQHHDVVALDIVPSRVELLNDRISPIVDKEIQQFLKEDNIRFRATLDKFDAYQNADYVIIA TPTDYDPKTNYFDTSSVESVIQDVISFNPAAVMIIKSTVPVGFTAAMRQKFATENIIFSPEFLREGKALYDNLYPSRIVI GEQSERAREFAALLQEGAIKQEIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAETLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVEANRTRKDFIADAILARKPKVVGIYRLIMKSGSDNFRASSIQG IMKRIKAKGVEVIIYEPVMEEDTFFNSRLERDLHCFKQQADVIISNRMAADLLDVAEKVYTRDLFGSD
Sequences:
>Translated_388_residues MKITISGTGYVGLSNGLLIAQHHDVVALDIVPSRVELLNDRISPIVDKEIQQFLKEDNIRFRATLDKFDAYQNADYVIIA TPTDYDPKTNYFDTSSVESVIQDVISFNPAAVMIIKSTVPVGFTAAMRQKFATENIIFSPEFLREGKALYDNLYPSRIVI GEQSERAREFAALLQEGAIKQEIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAETLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVEANRTRKDFIADAILARKPKVVGIYRLIMKSGSDNFRASSIQG IMKRIKAKGVEVIIYEPVMEEDTFFNSRLERDLHCFKQQADVIISNRMAADLLDVAEKVYTRDLFGSD >Mature_388_residues MKITISGTGYVGLSNGLLIAQHHDVVALDIVPSRVELLNDRISPIVDKEIQQFLKEDNIRFRATLDKFDAYQNADYVIIA TPTDYDPKTNYFDTSSVESVIQDVISFNPAAVMIIKSTVPVGFTAAMRQKFATENIIFSPEFLREGKALYDNLYPSRIVI GEQSERAREFAALLQEGAIKQEIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAETLGLNTRQIIEGVCLDPRIGN HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVEANRTRKDFIADAILARKPKVVGIYRLIMKSGSDNFRASSIQG IMKRIKAKGVEVIIYEPVMEEDTFFNSRLERDLHCFKQQADVIISNRMAADLLDVAEKVYTRDLFGSD
Specific function: Unknown
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=367, Percent_Identity=27.5204359673025, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI296040438, Length=242, Percent_Identity=27.6859504132231, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI296040443, Length=216, Percent_Identity=27.3148148148148, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1788340, Length=388, Percent_Identity=88.4020618556701, Blast_Score=711, Evalue=0.0, Organism=Escherichia coli, GI48994968, Length=377, Percent_Identity=24.6684350132626, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17560350, Length=378, Percent_Identity=25.3968253968254, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI17136908, Length=378, Percent_Identity=25.9259259259259, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 43637; Mature: 43637
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITISGTGYVGLSNGLLIAQHHDVVALDIVPSRVELLNDRISPIVDKEIQQFLKEDNIR CEEEEECCCEEECCCCEEEEECCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHCCCE FRATLDKFDAYQNADYVIIATPTDYDPKTNYFDTSSVESVIQDVISFNPAAVMIIKSTVP EEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC VGFTAAMRQKFATENIIFSPEFLREGKALYDNLYPSRIVIGEQSERAREFAALLQEGAIK CCHHHHHHHHHHHCCEEECHHHHHCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHH QEIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAETLGLNTRQIIEGVCLDPRIGN HHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVEANRTRKDFIADAILARKPKVVG CCCCCCCCCCCEECCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH IYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMEEDTFFNSRLERDLHCFKQQA HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH DVIISNRMAADLLDVAEKVYTRDLFGSD HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKITISGTGYVGLSNGLLIAQHHDVVALDIVPSRVELLNDRISPIVDKEIQQFLKEDNIR CEEEEECCCEEECCCCEEEEECCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHCCCE FRATLDKFDAYQNADYVIIATPTDYDPKTNYFDTSSVESVIQDVISFNPAAVMIIKSTVP EEEEHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCC VGFTAAMRQKFATENIIFSPEFLREGKALYDNLYPSRIVIGEQSERAREFAALLQEGAIK CCHHHHHHHHHHHCCEEECHHHHHCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCHH QEIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAETLGLNTRQIIEGVCLDPRIGN HHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCC HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNIISAIVEANRTRKDFIADAILARKPKVVG CCCCCCCCCCCEECCHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH IYRLIMKSGSDNFRASSIQGIMKRIKAKGVEVIIYEPVMEEDTFFNSRLERDLHCFKQQA HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH DVIISNRMAADLLDVAEKVYTRDLFGSD HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7682279; 11677609 [H]