| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is mtlR [H]
Identifier: 194735117
GI number: 194735117
Start: 3758023
End: 3758613
Strand: Direct
Name: mtlR [H]
Synonym: SeSA_A3887
Alternate gene names: 194735117
Gene position: 3758023-3758613 (Clockwise)
Preceding gene: 194735630
Following gene: 194736157
Centisome position: 79.8
GC content: 53.81
Gene sequence:
>591_bases ATGACGCAGAACCCGGCGCAGGTTAGCCTGCGCCCAAATAACAGATTGTCAGATATGCAGGCAATAATGGAACAAACCCA GGCCTTTGAAAATCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTACGGAGCTTCCTGATTACTGCCGTCGAGTTAT TGACCGAGGCGGTGAATATTCTGGTGCTCCAGGTGTTTCGCAAAGACGACTATGCGGTGAAATACGCTGTGGAACCGTTG CTGGACGGCGACGGACCGCTGGGCGATCTTTCGGTACGTCTGAAACTTATCTATGGCCTGGGCGTACTCAGCCGCACCGA ATATGAAGATGCGGAGCTGTTAATGGCGCTGCGCGAAGAGCTGAATCACGACGGCAATGAGTACGCCTTTACCGACGATG AAATCCTCGGGCCGTTTGGCGAACTACACTGCGTCATGGCGCTGCCGCCGCCGCCGCATTTTGATACGTCCGACGCGGCG CTCTACGCCATGCAAATTCAGCGCTACCAGCAGGCGGTGCGTTCGACGATGGTTCTCTCCCTGACCGAGCTGATTTCTAA AATCAGCTTAAAAAAGGCCTTTCAAAAGTAA
Upstream 100 bases:
>100_bases TTGACGAAAAAGGTCCACAGGCCGCTCTGGCGCAAATTTCCGGGCTGGATGCCAATAGCGATGTGGTGGCGGAGGCGGTT AACGCTTATAACGCGACCAA
Downstream 100 bases:
>100_bases ATCCCGCCGTTAACCTCTTTCTTCTTCTTTTGGTCGGTACAGCCGCCGGTAATATTCCAGACGCTGCAAATAAATGGGCG CGCTCTCCGACGGCACCTCG
Product: mannitol repressor protein
Products: NA
Alternate protein names: Mannitol repressor protein [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNILVLQVFRKDDYAVKYAVEPL LDGDGPLGDLSVRLKLIYGLGVLSRTEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAA LYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK
Sequences:
>Translated_196_residues MTQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNILVLQVFRKDDYAVKYAVEPL LDGDGPLGDLSVRLKLIYGLGVLSRTEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAA LYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK >Mature_195_residues TQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNILVLQVFRKDDYAVKYAVEPLL DGDGPLGDLSVRLKLIYGLGVLSRTEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAAL YAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK
Specific function: Acts as a repressor of the mtlAD operon [H]
COG id: COG3722
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yggD [H]
Homologues:
Organism=Escherichia coli, GI1790029, Length=191, Percent_Identity=92.6701570680628, Blast_Score=364, Evalue=1e-102, Organism=Escherichia coli, GI1789297, Length=105, Percent_Identity=36.1904761904762, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007761 [H]
Pfam domain/function: PF05068 MtlR [H]
EC number: NA
Molecular weight: Translated: 22060; Mature: 21928
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNI CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVLSRTEYEDAELLMALREE HHHHHHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAALYAMQIQRYQQAVRSTMVLS HCCCCCCEEECCHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTELISKISLKKAFQK HHHHHHHHHHHHHHCC >Mature Secondary Structure TQNPAQVSLRPNNRLSDMQAIMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNI CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVLSRTEYEDAELLMALREE HHHHHHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LNHDGNEYAFTDDEILGPFGELHCVMALPPPPHFDTSDAALYAMQIQRYQQAVRSTMVLS HCCCCCCEEECCHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LTELISKISLKKAFQK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]