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The map label for this gene is hrpA [H]

Identifier: 194734661

GI number: 194734661

Start: 1702074

End: 1705994

Strand: Reverse

Name: hrpA [H]

Synonym: SeSA_A1761

Alternate gene names: 194734661

Gene position: 1705994-1702074 (Counterclockwise)

Preceding gene: 194738087

Following gene: 194734172

Centisome position: 36.23

GC content: 53.89

Gene sequence:

>3921_bases
ATGCTGCCCAAGAGCTTTATGACTGAACAATCTACGTTGACGCTTCAGGTGTTACAGCAGCGGCTGGATGCACTGATGCT
GCGCGACAAACAGCGCTTTGCGCGCCGCCTGCATGGCGTAAAGAAAGTAAAAAATCCTGATGCGCAACAGGCCATTTTCC
AGACGATGGCGAAAGAAATTGAACAGGCTGCGGCGCAGGTCGCCCTCCGCGAAGCGGCGCGCCCCTCAATCACTTATCCG
CAAAATCTGCCTGTTAGCCAGAAGAAACAGGACATTCTGGAAGCGATCCGCGATCATCAGGTGGTGATCGTGGCAGGGGA
AACCGGTTCCGGTAAAACCACCCAGTTGCCGAAAATTTGTATGGAGCTGGGACGCGGAATTAAAGGACTTATTGGACATA
CTCAGCCGCGTCGCCTGGCGGCGCGCACCGTCGCTAACCGCATTGCCGAAGAGTTGCAAACGGAGCCAGGCGGCTGCATC
GGCTATAAAGTTCGTTTCAGCGATCATGTCAGTAGCAACACCATGGTCAAACTGATGACGGACGGTATCCTGCTGGCGGA
AATCCAGCAGGACAGGCTATTGATGCAGTATGACACCATCATTATTGATGAAGCGCATGAACGCAGCCTGAATATTGACT
TCTTGCTCGGCTATCTGAAAGAGCTTCTGCCGCGTCGCCCCGATCTGAAAGTGATTATTACCTCTGCGACCATCGACCCG
GAACGTTTCTCGCGCCACTTTAATAACGCGCCGATTATCGAAGTCTCTGGCCGAACGTATCCCGTAGAAGTTCGTTATCG
CCCTATCGTGGAAGAGGCTGACGACACTGAACGCGATCAGCTACAGGCAATTTTCGACGCTGTTGATGAACTGGGGCGTG
AAAGTCCCGGCGATATTCTGATTTTTATGAGCGGAGAGCGGGAAATCCGCGATACCGCCGACGCCCTGAACAAGCTGAAC
TTACGGCATACCGAAGTGTTGCCGCTGTATGCACGCTTGTCGAACAGCGAACAGAACCGCGTTTTCCAGTCGCACAGCGG
ACGCCGTATCGTGCTGGCGACTAACGTGGCGGAAACCTCGCTGACGGTGCCGGGTATCAAGTATGTGATCGATCCTGGCA
CTGCGCGCATCAGCCGCTACAGCTACCGCACTAAAGTGCAGCGCCTGCCGATTGAACCGATCTCACAGGCTTCCGCCAAC
CAGCGTAAAGGGCGTTGCGGACGCGTATCGGAAGGGATCTGCATTCGTCTGTATTCGGAAGATGACTTTTTGTCACGTCC
GGAATTTACCGACCCGGAAATTCTACGTACCAACCTGGCGTCGGTTATTTTGCAGATGACCGCCCTGGGGCTGGGTGACA
TCGCTGCCTTCCCGTTTGTCGAAGCGCCGGATAAGCGCAATATTCAGGATGGCGTGCGTTTGTTGGAAGAGCTGGGGGCG
ATTACCGCCGACGAACAGCAAACGGCATATAAGCTGACGCCGCTGGGCCGACAATTATCCCAGCTGCCGGTCGACCCGCG
CCTGGCGCGTATGGTTCTGGAAGCGCAAAAGCATGGCTGTGTGCGCGAAGCGATGATCATTACTTCCGCACTCTCTATTC
AGGATCCGCGCGAGCGCCCAGTGGACAAGCAGCAGGCTTCCGATGAGAAACACCGGCGCTTCCATGATAAGGAGTCCGAT
TTTCTGGCGTTTGTTAACCTGTGGAATTACCTCGGCGAGCAACAAAAGGCCCTGTCGTCGAATCAATTCCGCCGTCTGTG
TCGCACCGACTATCTGAACTATTTACGCGTGCGTGAGTGGCAGGATATCTATACCCAACTGCGTCAGGTGGTAAAAGAAC
TGGGGATTCCGGTAAACAGCGAACCCGCAGAGTACCGGGAAATTCACGTTGCGTTGTTAACGGGGCTGTTGTCGCATATC
GGGATGAAAGATGCCGATAAACAAGAGTACACCGGCGCGCGTAACGCCCGATTCTCTATTTTCCCCGGATCCGGTTTATT
CAAAAAACCGCCGAAATGGACAATGGTCGCAGAACTGGTGGAGACCAGCCGTTTGTGGGGGCGCATCGCTGCCCGCATTG
AGCCAGAATGGGTGGAACCGGTAGCCCAGCACCTGATTAAACGTTCATATAGCGAACCGCACTGGGAGCGGGCGCAAGGC
GCGGTGATGGCGACGGAAAAGGTTACTGTCTACGGTCTGCCGATTGTCGCCGCGCGCAAGGTGAATTACAGCCAGATTGA
CCCGGCGTTGTGTCGCGAGTTGTTCATCCGCCATGCGCTGGTGGAGGGGGACTGGCAAACCCGTCATGCCTTCTTCCGTG
AGAATCTAAAATTGCGTGCGGAAGTCGAGGAACTTGAGCACAAATCTCGCCGCCGCGATATCCTGGTGGATGACGATACC
CTGTTTGAGTTTTATGACCAGCGTATTAGCCATGACGTTATTTCCGCCCGCCACTTTGATAGTTGGTGGAAAAAAATCAG
CCGCGAGACGCCGGATCTGCTCAACTTTGAAAAAAGTATGCTGATTAAAGAAGGCGCGGAAAAAATCAGCAAACTGGATT
ACCCGAATTTCTGGCACCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAATTTGAACCGGGCGCGGATGCTGACGGCGTG
ACCGTCCATATTCCGTTGCCGCTACTTAACCAGGTTGATGAGAGCGGTTTTGAATGGCAGATCCCAGGGTTGCGCCGTGA
ATTAGTGATTGCGCTGATTAAATCGTTGCCAAAACCGGTACGTCGCAACTTTGTTCCGGCTCCAAACTATGCTGAAGCGT
TTTTAGGTCGCGTAACGCCGCTGGAGCTGCCGCTGCTGGACGCTCTGGAGCGTGAACTGCGCCGGATGACCGGCGTCACG
GTCGACCGGGAAGACTGGCATTGGGATCAGGTGCCCGAGCATCTGAAAATCACGTTTCGCGTGGTGAATGACAAAAACAA
GAAACTGCAGGAAGGGCGTTCGCTCGCCGAGCTTAAAAATGCGCTGAAAGGCAAAGTGCAGGAGACGCTCTCGGCGGTGG
CGGATGACGGCATCGAGCAGAGCGGGCTGCATATCTGGAGTTTCGGCGAGCTGCCGGAAAGCTACGAACAGAAACGCGGT
AATTATAAAGTGAAGGCGTGGCCGGCGTTAGTGGATGAGCGTGACAGCGTCGCTATCAAATTGTTTGATAATCCGCTGGA
ACAACAACAGGCGATGTGGTGCGGTTTACGCCGTCTGCTGTTGCTCAATATTCCTTCACCGATTAAGTATCTGCATGAGA
AATTGCCGAATAAAGCCAAGCTGGGGCTGTACTTTAACCCGTACGGCAAAGTACTGGAGTTGATTGATGACTGTATCGCC
TGCGGGGTAGATAAGCTGATAGATGCCAACGGCGGACCGGTGTGGAGCGAAGCAGGTTTCACCGCGCTGCACGAAAAGGT
TCGCGCCGAGCTGAATGATACTGTGGTGGATATCGCGAAGCAGGTTGAGCGCATCCTGACGACCGTATTCAATATCAATA
AGCGTCTGAAAGGGCGGGTGGATATGAGCATGGCGTTGGGGCTTTCCGATATCAAGGCGCAGATGAGCGGTCTGGTATAC
CGTGGTTTTGTGACTGGCAACGGCTTTAAACGTCTCGGCGATACGCTGCGTTATCTGCAGGCAATTGAAAAGCGGCTGGA
GAAACTGGCTGTCGATCCGCACCGCGATCGGGCGCAAATGCTGAAAGTCGAAAGCGTCCAGCAGGCGTGGCAACAATGGA
TAAATAAATTGCCTCCAGCGCGTCGCGAAGATGATGATGTTAAAGAGATCCGTTGGATGATTGAAGAACTGCGTGTCAGT
TATTTCGCCCAACAGCTCGGTACGCCTTATCCTATTTCCGATAAGCGTATTTTACAGGCCATGGATCAGATTACGGCCTA
A

Upstream 100 bases:

>100_bases
CAATATATCGAACCCTTTGTTCGAAATTATTGAACAACACAAAAAAAGCCCCAATGTGGTACTCTATACCTATCATTTAA
AACGATTTTAAACAGGCAGA

Downstream 100 bases:

>100_bases
AAAGCCAGGCGACGACGTCTTTCAAAGAGATCCGGTACAAGTTCGGAACAAAAAGGAGGAATTATGAATACAACGCCATT
TCCGGCGCTCTCTGCGGAAA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1306; Mature: 1306

Protein sequence:

>1306_residues
MLPKSFMTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYP
QNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCI
GYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDP
ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLN
LRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN
QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA
ITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESD
FLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHI
GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQG
AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDT
LFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV
TVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVT
VDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRG
NYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIA
CGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVY
RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVS
YFAQQLGTPYPISDKRILQAMDQITA

Sequences:

>Translated_1306_residues
MLPKSFMTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYP
QNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCI
GYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDP
ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLN
LRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN
QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA
ITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESD
FLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHI
GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQG
AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDT
LFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV
TVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVT
VDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRG
NYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIA
CGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVY
RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVS
YFAQQLGTPYPISDKRILQAMDQITA
>Mature_1306_residues
MLPKSFMTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEIEQAAAQVALREAARPSITYP
QNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCI
GYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDP
ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLN
LRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASAN
QRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA
ITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESD
FLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHI
GMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQG
AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDT
LFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGV
TVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVT
VDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQSGLHIWSFGELPESYEQKRG
NYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIA
CGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVY
RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVS
YFAQQLGTPYPISDKRILQAMDQITA

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=640, Percent_Identity=37.1875, Blast_Score=416, Evalue=1e-116,
Organism=Homo sapiens, GI68509926, Length=644, Percent_Identity=35.4037267080745, Blast_Score=405, Evalue=1e-112,
Organism=Homo sapiens, GI255982614, Length=647, Percent_Identity=35.8578052550232, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI256000749, Length=650, Percent_Identity=35.6923076923077, Blast_Score=398, Evalue=1e-110,
Organism=Homo sapiens, GI20544129, Length=655, Percent_Identity=34.6564885496183, Blast_Score=389, Evalue=1e-108,
Organism=Homo sapiens, GI20336302, Length=660, Percent_Identity=33.9393939393939, Blast_Score=381, Evalue=1e-105,
Organism=Homo sapiens, GI17999539, Length=687, Percent_Identity=35.3711790393013, Blast_Score=380, Evalue=1e-105,
Organism=Homo sapiens, GI38158022, Length=553, Percent_Identity=36.5280289330922, Blast_Score=356, Evalue=9e-98,
Organism=Homo sapiens, GI299829255, Length=605, Percent_Identity=34.0495867768595, Blast_Score=352, Evalue=1e-96,
Organism=Homo sapiens, GI261878478, Length=649, Percent_Identity=32.9738058551618, Blast_Score=343, Evalue=7e-94,
Organism=Homo sapiens, GI20336290, Length=517, Percent_Identity=35.0096711798839, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI167830433, Length=566, Percent_Identity=31.8021201413428, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI20336294, Length=517, Percent_Identity=35.0096711798839, Blast_Score=261, Evalue=3e-69,
Organism=Homo sapiens, GI261878481, Length=599, Percent_Identity=29.7161936560935, Blast_Score=257, Evalue=6e-68,
Organism=Homo sapiens, GI166851804, Length=601, Percent_Identity=32.1131447587354, Blast_Score=254, Evalue=4e-67,
Organism=Homo sapiens, GI167830436, Length=563, Percent_Identity=31.7939609236234, Blast_Score=253, Evalue=1e-66,
Organism=Homo sapiens, GI100913206, Length=648, Percent_Identity=28.5493827160494, Blast_Score=231, Evalue=3e-60,
Organism=Homo sapiens, GI20336300, Length=649, Percent_Identity=27.4268104776579, Blast_Score=219, Evalue=2e-56,
Organism=Homo sapiens, GI163914394, Length=648, Percent_Identity=26.3888888888889, Blast_Score=194, Evalue=4e-49,
Organism=Homo sapiens, GI29029601, Length=422, Percent_Identity=30.8056872037915, Blast_Score=171, Evalue=6e-42,
Organism=Homo sapiens, GI67782362, Length=204, Percent_Identity=44.6078431372549, Blast_Score=169, Evalue=1e-41,
Organism=Homo sapiens, GI269847874, Length=189, Percent_Identity=41.2698412698413, Blast_Score=150, Evalue=6e-36,
Organism=Homo sapiens, GI39777586, Length=188, Percent_Identity=40.9574468085106, Blast_Score=149, Evalue=1e-35,
Organism=Escherichia coli, GI145693127, Length=1300, Percent_Identity=95.4615384615385, Blast_Score=2558, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=441, Percent_Identity=35.6009070294785, Blast_Score=240, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17535281, Length=641, Percent_Identity=35.8814352574103, Blast_Score=407, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17554326, Length=651, Percent_Identity=36.8663594470046, Blast_Score=402, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI25144243, Length=673, Percent_Identity=33.7295690936107, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI32565154, Length=643, Percent_Identity=34.2146189735614, Blast_Score=376, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17531507, Length=642, Percent_Identity=35.3582554517134, Blast_Score=376, Evalue=1e-104,
Organism=Caenorhabditis elegans, GI17556386, Length=646, Percent_Identity=35.6037151702786, Blast_Score=367, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI71990212, Length=673, Percent_Identity=32.2436849925706, Blast_Score=343, Evalue=3e-94,
Organism=Caenorhabditis elegans, GI71996313, Length=564, Percent_Identity=34.2198581560284, Blast_Score=291, Evalue=2e-78,
Organism=Caenorhabditis elegans, GI86562256, Length=590, Percent_Identity=27.4576271186441, Blast_Score=179, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17552054, Length=455, Percent_Identity=28.3516483516484, Blast_Score=155, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17507503, Length=367, Percent_Identity=28.8828337874659, Blast_Score=147, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6320850, Length=642, Percent_Identity=36.9158878504673, Blast_Score=423, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6321318, Length=646, Percent_Identity=36.2229102167183, Blast_Score=412, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6322939, Length=648, Percent_Identity=37.5, Blast_Score=357, Evalue=7e-99,
Organism=Saccharomyces cerevisiae, GI6324338, Length=664, Percent_Identity=33.8855421686747, Blast_Score=338, Evalue=4e-93,
Organism=Saccharomyces cerevisiae, GI6322772, Length=674, Percent_Identity=33.2344213649852, Blast_Score=331, Evalue=4e-91,
Organism=Saccharomyces cerevisiae, GI6323451, Length=594, Percent_Identity=28.7878787878788, Blast_Score=231, Evalue=5e-61,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=41.4746543778802, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI20129977, Length=648, Percent_Identity=37.3456790123457, Blast_Score=412, Evalue=1e-115,
Organism=Drosophila melanogaster, GI19921728, Length=643, Percent_Identity=35.1477449455677, Blast_Score=405, Evalue=1e-113,
Organism=Drosophila melanogaster, GI19921526, Length=694, Percent_Identity=35.5907780979827, Blast_Score=404, Evalue=1e-112,
Organism=Drosophila melanogaster, GI18859729, Length=637, Percent_Identity=36.2637362637363, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI19920696, Length=645, Percent_Identity=35.6589147286822, Blast_Score=375, Evalue=1e-103,
Organism=Drosophila melanogaster, GI45550174, Length=661, Percent_Identity=35.5521936459909, Blast_Score=369, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24643238, Length=561, Percent_Identity=33.6898395721925, Blast_Score=310, Evalue=3e-84,
Organism=Drosophila melanogaster, GI24585491, Length=615, Percent_Identity=30.0813008130081, Blast_Score=269, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24642763, Length=536, Percent_Identity=30.7835820895522, Blast_Score=236, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24585920, Length=522, Percent_Identity=31.2260536398467, Blast_Score=228, Evalue=2e-59,
Organism=Drosophila melanogaster, GI17136342, Length=525, Percent_Identity=31.2380952380952, Blast_Score=227, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24641942, Length=476, Percent_Identity=30.672268907563, Blast_Score=220, Evalue=4e-57,
Organism=Drosophila melanogaster, GI17136508, Length=599, Percent_Identity=29.3823038397329, Blast_Score=198, Evalue=2e-50,
Organism=Drosophila melanogaster, GI17136242, Length=505, Percent_Identity=28.7128712871287, Blast_Score=160, Evalue=5e-39,
Organism=Drosophila melanogaster, GI24641139, Length=304, Percent_Identity=31.5789473684211, Blast_Score=134, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 149417; Mature: 149417

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKSFMTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEI
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
MELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMT
HHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEC
DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDP
CCEEEEHHHHHHHHHHHCEEEEECHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCH
ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDIL
HHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
IFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS
EEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCC
LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE
EECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECC
DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCC
ITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP
CCCCCCHHHEEECHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
VDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREW
CCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSI
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEE
FPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQG
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCC
AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA
CEEEECEEEEEECCCCEECCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
EVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSM
HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQ
HHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCCCCEEEEECCHHHHHHCCCCCEEE
IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVT
CCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQ
CCCCCCCHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLL
CCCEEEECCCCCHHHHHHCCCEEEEECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHH
LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGF
HHCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCH
TALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHCCEEE
RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPA
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
RREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLPKSFMTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTMAKEI
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKIC
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHH
MELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTMVKLMT
HHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEC
DGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITSATIDP
CCEEEEHHHHHHHHHHHCEEEEECHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCH
ERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDIL
HHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEE
IFMSGEREIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETS
EEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCC
LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE
EECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECC
DDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCC
ITADEQQTAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERP
CCCCCCHHHEEECHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC
VDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREW
CCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDIYTQLRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSI
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEE
FPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQG
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHCC
AVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRA
CEEEECEEEEEECCCCEECCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
EVEELEHKSRRRDILVDDDTLFEFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSM
HHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQ
HHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCCCCEEEEECCHHHHHHCCCCCEEE
IPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRMTGVT
CCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGIEQ
CCCCCCCHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQAMWCGLRRLL
CCCEEEECCCCCHHHHHHCCCEEEEECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHH
LLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDKLIDANGGPVWSEAGF
HHCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCH
TALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHCCEEE
RGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINKLPPA
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
RREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]