| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194734641
Identifier: 194734641
GI number: 194734641
Start: 670010
End: 671545
Strand: Direct
Name: 194734641
Synonym: SeSA_A0694
Alternate gene names: NA
Gene position: 670010-671545 (Clockwise)
Preceding gene: 194734108
Following gene: 194737695
Centisome position: 14.23
GC content: 60.61
Gene sequence:
>1536_bases ATGAATTTTCTGGATAAAGCGATTGGCGTGCTGGCTCCGGGGTGGGGCGCGTCCCGTCTGCGTTCCAGGATGGCTATCCG GGCGTATGAAGCCATCACACCCACGCGTACCCACAGGGTGAAGCGTGAAAACCGCAGCGGGGACCAGCTTATCCAGCTGG CCGGAAAGTCGCTGCGGGAGCAGGCCCGGTGGTTTGACAACAACCACGACCTGGTGATTGGCGCGCTGGACAAAATGGAA GAGCGCATCATTGGCGCGAAGGGGATCATCGTGGAACCCCAGCCCCTGACGGGGGCCGGTACGCTGAATTCTGTGCTGGC AGAAAAAATCCGCCGGTGCTGGGCGGAATGGTCGGTTTCGCCGGAGGTGACCGGGCAGTACACCCGTCCCGTTCTGGAAA GGCTGATGCTGCGCACCTGGCTGCGTGACGGAGAGGTGTTCACTCAGGTGCTGACCGGAAAAATCAGCGGGCTGTCTCCT GTGGCGGGGGTGCCTTTCTGGCTTGAGGCGCTGGAGCCGGACTATATCCCGCTGGAGAAGACCGACAACAGCAGCAACCT GGTACAGGGGATTTACTTCAACGAGTGGCGGCGTCCGGTGAAATATCTGGTCTGCCAGTCCTGGCCTGGGGCGGGCGCTG CGGCAGTCGCCGTTAAAGAGGTGACTGCGGAAAATATGCTGCATCTGCGCTTTACCCGCCGTCTTAATCAGGCGCGCGGC GCTTCTCTTCTTGCCCCCGTCATCATTCGTCTGATGGACCTGAAAGAGTACGAGGACAGCGAGCGCATCGCGGCGCGGAT TGCCGCGTCTCTCGGCATGTTCATCAAAAAGCAGGATGTCGGCACCGACGGCTATGTGGCGCCGGAGAAACGTAAAGAGA CACAAATCCAGCCCGGCATGTTGTTTGACGGTCTGAATCCCGGGGAGGATATCGGGATGATCAAATCAGACCGCCCGAAT GCGGGTCTGGAATCTTTCCGGATGGGGCAGCTTCGTGCGGTGGCCGCCGGACTGCGCGGCAGCTTCTCTTCCATTGCCAG AAACTATGACGGCACCTACAGCGCTCAGCGTCAGGAGCTGGTGGAGGCGCAGGAGGGGTACAGCATCCTTCAGGACAGCT TTATTGCTGCCTTTACCCGTCCTCTCTACCGGCGCTGGCTGGCTGCTGCGGTGGCTTCCGGTGCCATTGAGGTACCTGCC GGCACGGATATGTCATCGCTGTTTAATGCGGTGTATTCCGGGCCTGTCATGCCGTGGATTGACCCGCTCAAAGAGGCTAA CGCCTGGCGGGTGCTGATACGTGGCGGGGCCGCAACAGAAGGTGACTGGGTGAGGGCCAGAGGGGGCGCACCTGCCGACG TGAAACGCCGCCGCAAGGCGGAAACTGATGAAAACCGTAAGCTGGGGCTGGTGTTTGACACCGATCCGGCGCATGAAACC GGAGAACGATCCGATGTTAAAGAGGAAAAAAAGGACCCTGAACAGTCCACCCAGGGCGATGGCAGCCGCGCGCGGGAAGA ACGAAAGCGGCGCTGA
Upstream 100 bases:
>100_bases TGGAAAGCCTCGGGGATATTCGCCGGGGGCGTAAGGAGATAGAGGATCGCCTGCGGCTGATGGACTGCGATCGACAACTC CATTCACTGGCGAGGTTCAC
Downstream 100 bases:
>100_bases ATCCTGGTACACCATCCGCGCGGCGGCGAATAACGCGGCCGATATCAGTATTTACGATGAAATTGGTGGCTGGGGAATTT CGGCGCACTGGTTTGCCGAA
Product: phage portal protein, lambda family protein
Products: NA
Alternate protein names: Lambda Family Phage Portal Protein; Phage Portal Protein; Phage Portal Protein Lambda; Bacteriophage Capsid Protein; Portal Protein; Portal Protein Lambda Family; Phage Portal Protein Of Lambda Family; Portal Protein B; Portal Protein Putative Prophage; Bacteriophage-Related Protein; Bacteriophage Capsid Protein; Prophage; Portal Protein GPB Of Phage Lambda; Head-Tail Preconnector Protein Phage Origin; Gifsy-2 Prophage VmtV; Phage Protein Gp; Phage Portal Protein Gp; Phage Portal Protein Lambda Family Protein; Phage-Related Portal Protein
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MNFLDKAIGVLAPGWGASRLRSRMAIRAYEAITPTRTHRVKRENRSGDQLIQLAGKSLREQARWFDNNHDLVIGALDKME ERIIGAKGIIVEPQPLTGAGTLNSVLAEKIRRCWAEWSVSPEVTGQYTRPVLERLMLRTWLRDGEVFTQVLTGKISGLSP VAGVPFWLEALEPDYIPLEKTDNSSNLVQGIYFNEWRRPVKYLVCQSWPGAGAAAVAVKEVTAENMLHLRFTRRLNQARG ASLLAPVIIRLMDLKEYEDSERIAARIAASLGMFIKKQDVGTDGYVAPEKRKETQIQPGMLFDGLNPGEDIGMIKSDRPN AGLESFRMGQLRAVAAGLRGSFSSIARNYDGTYSAQRQELVEAQEGYSILQDSFIAAFTRPLYRRWLAAAVASGAIEVPA GTDMSSLFNAVYSGPVMPWIDPLKEANAWRVLIRGGAATEGDWVRARGGAPADVKRRRKAETDENRKLGLVFDTDPAHET GERSDVKEEKKDPEQSTQGDGSRAREERKRR
Sequences:
>Translated_511_residues MNFLDKAIGVLAPGWGASRLRSRMAIRAYEAITPTRTHRVKRENRSGDQLIQLAGKSLREQARWFDNNHDLVIGALDKME ERIIGAKGIIVEPQPLTGAGTLNSVLAEKIRRCWAEWSVSPEVTGQYTRPVLERLMLRTWLRDGEVFTQVLTGKISGLSP VAGVPFWLEALEPDYIPLEKTDNSSNLVQGIYFNEWRRPVKYLVCQSWPGAGAAAVAVKEVTAENMLHLRFTRRLNQARG ASLLAPVIIRLMDLKEYEDSERIAARIAASLGMFIKKQDVGTDGYVAPEKRKETQIQPGMLFDGLNPGEDIGMIKSDRPN AGLESFRMGQLRAVAAGLRGSFSSIARNYDGTYSAQRQELVEAQEGYSILQDSFIAAFTRPLYRRWLAAAVASGAIEVPA GTDMSSLFNAVYSGPVMPWIDPLKEANAWRVLIRGGAATEGDWVRARGGAPADVKRRRKAETDENRKLGLVFDTDPAHET GERSDVKEEKKDPEQSTQGDGSRAREERKRR >Mature_511_residues MNFLDKAIGVLAPGWGASRLRSRMAIRAYEAITPTRTHRVKRENRSGDQLIQLAGKSLREQARWFDNNHDLVIGALDKME ERIIGAKGIIVEPQPLTGAGTLNSVLAEKIRRCWAEWSVSPEVTGQYTRPVLERLMLRTWLRDGEVFTQVLTGKISGLSP VAGVPFWLEALEPDYIPLEKTDNSSNLVQGIYFNEWRRPVKYLVCQSWPGAGAAAVAVKEVTAENMLHLRFTRRLNQARG ASLLAPVIIRLMDLKEYEDSERIAARIAASLGMFIKKQDVGTDGYVAPEKRKETQIQPGMLFDGLNPGEDIGMIKSDRPN AGLESFRMGQLRAVAAGLRGSFSSIARNYDGTYSAQRQELVEAQEGYSILQDSFIAAFTRPLYRRWLAAAVASGAIEVPA GTDMSSLFNAVYSGPVMPWIDPLKEANAWRVLIRGGAATEGDWVRARGGAPADVKRRRKAETDENRKLGLVFDTDPAHET GERSDVKEEKKDPEQSTQGDGSRAREERKRR
Specific function: Unknown
COG id: COG5511
COG function: function code R; Bacteriophage capsid protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56881; Mature: 56881
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLDKAIGVLAPGWGASRLRSRMAIRAYEAITPTRTHRVKRENRSGDQLIQLAGKSLRE CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH QARWFDNNHDLVIGALDKMEERIIGAKGIIVEPQPLTGAGTLNSVLAEKIRRCWAEWSVS HHHHCCCCCCEEEECHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC PEVTGQYTRPVLERLMLRTWLRDGEVFTQVLTGKISGLSPVAGVPFWLEALEPDYIPLEK CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCC TDNSSNLVQGIYFNEWRRPVKYLVCQSWPGAGAAAVAVKEVTAENMLHLRFTRRLNQARG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASLLAPVIIRLMDLKEYEDSERIAARIAASLGMFIKKQDVGTDGYVAPEKRKETQIQPGM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC LFDGLNPGEDIGMIKSDRPNAGLESFRMGQLRAVAAGLRGSFSSIARNYDGTYSAQRQEL EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH VEAQEGYSILQDSFIAAFTRPLYRRWLAAAVASGAIEVPAGTDMSSLFNAVYSGPVMPWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCHHH DPLKEANAWRVLIRGGAATEGDWVRARGGAPADVKRRRKAETDENRKLGLVFDTDPAHET HHHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCC GERSDVKEEKKDPEQSTQGDGSRAREERKRR CCHHHHHHHHCCCCHHCCCCCHHHHHHHHCC >Mature Secondary Structure MNFLDKAIGVLAPGWGASRLRSRMAIRAYEAITPTRTHRVKRENRSGDQLIQLAGKSLRE CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHH QARWFDNNHDLVIGALDKMEERIIGAKGIIVEPQPLTGAGTLNSVLAEKIRRCWAEWSVS HHHHCCCCCCEEEECHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC PEVTGQYTRPVLERLMLRTWLRDGEVFTQVLTGKISGLSPVAGVPFWLEALEPDYIPLEK CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCC TDNSSNLVQGIYFNEWRRPVKYLVCQSWPGAGAAAVAVKEVTAENMLHLRFTRRLNQARG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC ASLLAPVIIRLMDLKEYEDSERIAARIAASLGMFIKKQDVGTDGYVAPEKRKETQIQPGM HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCC LFDGLNPGEDIGMIKSDRPNAGLESFRMGQLRAVAAGLRGSFSSIARNYDGTYSAQRQEL EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHH VEAQEGYSILQDSFIAAFTRPLYRRWLAAAVASGAIEVPAGTDMSSLFNAVYSGPVMPWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCHHH DPLKEANAWRVLIRGGAATEGDWVRARGGAPADVKRRRKAETDENRKLGLVFDTDPAHET HHHHCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCC GERSDVKEEKKDPEQSTQGDGSRAREERKRR CCHHHHHHHHCCCCHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA