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The map label for this gene is fumB [H]

Identifier: 194734207

GI number: 194734207

Start: 4435944

End: 4437590

Strand: Reverse

Name: fumB [H]

Synonym: SeSA_A4555

Alternate gene names: 194734207

Gene position: 4437590-4435944 (Counterclockwise)

Preceding gene: 194738234

Following gene: 194735145

Centisome position: 94.23

GC content: 54.77

Gene sequence:

>1647_bases
ATGTCGAAAAAAGAGTTTATCTATCAGGCGCCTTTCCCGATGGGAGAGGACAAAACAGAGTATTATCTGCTCACCTCCGA
TTATGTCAGCGTCAGTGAATTCAATGGAGAATCTATCCTAAACGTTGAGCCGCAGGCGTTAACGTTGCTGGCTCAGCAGG
CCTTCCATGATGCGTCTTTTATGCTCCGTCCTGAACACCAGCAGCAAGTCGCCGCCATTCTCCATGACCCCGAAGCCAGC
GAAAACGACAAATATGTGGCATTGCAATTCCTGAGAAACTCCGAAATCGCCGCCAAAGGCATTCTACCGACCTGCCAGGA
TACCGGCACGGCGATTATCATGGGTAAAAAAGGCCAACGCGTCTGGACGGGCGGCGGCGATGAAGCCGCGCTCTCCAAAG
GCGTGTTTAATACCTATATCGAAGATAACCTGCGCTACTCGCAGAACGCACCGCTGGATATGTACAAAGAGGTCAATACC
GGCAGCAACCTGCCAGCGCAAATCGATCTCTATGCCGTCGACGGCGACGAGTACAAGTTCCTTTGCGTGGCGAAAGGCGG
CGGTTCAGCAAACAAAACGTATCTCTATCAGGAGACCAAAGCGCTGCTCACCCCAGGCAAGCTGAAAAACTTCCTCGTTG
AGAAAATGCGCACGCTGGGCACCGCAGCCTGTCCGCCATACCATATCGCCTTTGTCATTGGCGGCACCTCGGCGGAAAGC
ACGCTGAAAACCGTTAAACTCGCCAGCACCCACTATTACGACGCGCTGCCGACGGAAGGTAACGAGCACGGCCAGGCATT
CCGCGATCTCCACCTGGAACAGGAACTGCTGGAAGAAGCGCATAAACTTGGCCTCGGCGCCCAGTTCGGCGGGAAATATT
TCGCCCACGATATTCGCGTAATTCGCCTGCCTCGTCACGGCGCTTCCTGTCCGGTGGGGATGGGCGTCTCCTGCTCGGCA
GACCGTAACATCAAAGCGAAAATCAACCGCGAAGGCATCTGGATCGAAAAACTGGAACACAATCCGGGCCAGTATATTCC
GCCAGCGCTGCGTCAGGCGGGCGAAGGCGACGCGGTGAAAGTCGATCTCAACCGTCCGATGAAAGAGATCCTCGCCCAGC
TATCGCAGTACCCGGTCTCGACTCGCCTGTCGCTGACGGGCACCATTATCGTAGGTCGCGATATCGCCCACGCGAAGCTA
AAAGAGCGTATTGAATCCGGCGAAGACCTGCCGCAGTATATTAAAGACCACCCCATCTATTACGCAGGCCCGGCAAAAAC
CCCGGCAGGTTATCCATCTGGCTCATTAGGCCCCACCACCGCAGGCCGAATGGACTCTTATGTCGATCTGCTGCAATCCC
ACGGCGGCAGTATGATCATGCTGGCGAAAGGCAACCGTAGTCAGCAGGTCACGGATGCCTGTAAAAAACACGGCGGCTTT
TATTTGGGCAGTATCGGCGGCCCGGCGGCGGTACTGGCACAGCAGAGCATTAAGCATCTGGAGTGCGTCGAGTATCCGGA
ACTCGGCATGGAAGCTATCTGGAAAATTGAAGTAGAAGATTTCCCGGCCTTTATCCTGGTGGATGACAAAGGCAACGATT
TCTTCCAGCAGATTGTCAGCAAACAGTGCGCTAACTGCGCGAAATAA

Upstream 100 bases:

>100_bases
TGTAATGGCCGCGCGCGCCGCCCGGCTATGCGCGGCGCGCGACTTAGAGCCTGGCCCATGAGGCTCTTAATACATTTTCT
TACTATTAGGCTGGAAGCAC

Downstream 100 bases:

>100_bases
CCTGGCAGGCCCGGCGTTCACCCGGGCCGCGTTATCGGTTAATTGCCGGATGGCGCTACGCTTATCCGGCCTGCACGAGA
GACCATGCTCACGCTTTTAC

Product: fumarate hydratase class I, anaerobic

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSKKEFIYQAPFPMGEDKTEYYLLTSDYVSVSEFNGESILNVEPQALTLLAQQAFHDASFMLRPEHQQQVAAILHDPEAS
ENDKYVALQFLRNSEIAAKGILPTCQDTGTAIIMGKKGQRVWTGGGDEAALSKGVFNTYIEDNLRYSQNAPLDMYKEVNT
GSNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAES
TLKTVKLASTHYYDALPTEGNEHGQAFRDLHLEQELLEEAHKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSA
DRNIKAKINREGIWIEKLEHNPGQYIPPALRQAGEGDAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKL
KERIESGEDLPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACKKHGGF
YLGSIGGPAAVLAQQSIKHLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVSKQCANCAK

Sequences:

>Translated_548_residues
MSKKEFIYQAPFPMGEDKTEYYLLTSDYVSVSEFNGESILNVEPQALTLLAQQAFHDASFMLRPEHQQQVAAILHDPEAS
ENDKYVALQFLRNSEIAAKGILPTCQDTGTAIIMGKKGQRVWTGGGDEAALSKGVFNTYIEDNLRYSQNAPLDMYKEVNT
GSNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAES
TLKTVKLASTHYYDALPTEGNEHGQAFRDLHLEQELLEEAHKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSA
DRNIKAKINREGIWIEKLEHNPGQYIPPALRQAGEGDAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKL
KERIESGEDLPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACKKHGGF
YLGSIGGPAAVLAQQSIKHLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVSKQCANCAK
>Mature_547_residues
SKKEFIYQAPFPMGEDKTEYYLLTSDYVSVSEFNGESILNVEPQALTLLAQQAFHDASFMLRPEHQQQVAAILHDPEASE
NDKYVALQFLRNSEIAAKGILPTCQDTGTAIIMGKKGQRVWTGGGDEAALSKGVFNTYIEDNLRYSQNAPLDMYKEVNTG
SNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAEST
LKTVKLASTHYYDALPTEGNEHGQAFRDLHLEQELLEEAHKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSAD
RNIKAKINREGIWIEKLEHNPGQYIPPALRQAGEGDAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLK
ERIESGEDLPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACKKHGGFY
LGSIGGPAAVLAQQSIKHLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVSKQCANCAK

Specific function: It functions in the generation of fumarate for use as an anaerobic electron acceptor [H]

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1790564, Length=548, Percent_Identity=93.0656934306569, Blast_Score=1070, Evalue=0.0,
Organism=Escherichia coli, GI1787897, Length=548, Percent_Identity=88.3211678832117, Blast_Score=1014, Evalue=0.0,
Organism=Escherichia coli, GI1789443, Length=181, Percent_Identity=29.8342541436464, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004646
- InterPro:   IPR004647
- InterPro:   IPR011167
- InterPro:   IPR020557 [H]

Pfam domain/function: PF05681 Fumerase; PF05683 Fumerase_C [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 60105; Mature: 59974

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00163 FUMARATE_LYASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKEFIYQAPFPMGEDKTEYYLLTSDYVSVSEFNGESILNVEPQALTLLAQQAFHDASF
CCCCCEEEECCCCCCCCCCEEEEEECCCEEEEECCCCEEEECCHHHHHHHHHHHHCCCCE
MLRPEHQQQVAAILHDPEASENDKYVALQFLRNSEIAAKGILPTCQDTGTAIIMGKKGQR
EECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHCCCCCCCCCCCCEEEEECCCCE
VWTGGGDEAALSKGVFNTYIEDNLRYSQNAPLDMYKEVNTGSNLPAQIDLYAVDGDEYKF
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCEEE
LCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAES
EEEECCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHH
TLKTVKLASTHYYDALPTEGNEHGQAFRDLHLEQELLEEAHKLGLGAQFGGKYFAHDIRV
HHHEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECEEE
IRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPPALRQAGEGDAVK
EEECCCCCCCCCCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCCEEE
VDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKERIESGEDLPQYIKDHPIY
EECCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHCCEE
YAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACKKHGGF
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCE
YLGSIGGPAAVLAQQSIKHLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVS
EEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHH
KQCANCAK
HHHHCCCC
>Mature Secondary Structure 
SKKEFIYQAPFPMGEDKTEYYLLTSDYVSVSEFNGESILNVEPQALTLLAQQAFHDASF
CCCCEEEECCCCCCCCCCEEEEEECCCEEEEECCCCEEEECCHHHHHHHHHHHHCCCCE
MLRPEHQQQVAAILHDPEASENDKYVALQFLRNSEIAAKGILPTCQDTGTAIIMGKKGQR
EECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHCCCCCCCCCCCCEEEEECCCCE
VWTGGGDEAALSKGVFNTYIEDNLRYSQNAPLDMYKEVNTGSNLPAQIDLYAVDGDEYKF
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCEEE
LCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAES
EEEECCCCCCCCEEEEECHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHH
TLKTVKLASTHYYDALPTEGNEHGQAFRDLHLEQELLEEAHKLGLGAQFGGKYFAHDIRV
HHHEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECEEE
IRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPPALRQAGEGDAVK
EEECCCCCCCCCCCCEECCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCCEEE
VDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKERIESGEDLPQYIKDHPIY
EECCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHCCCCHHHHHHHCCEE
YAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACKKHGGF
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCE
YLGSIGGPAAVLAQQSIKHLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVS
EEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHHHHH
KQCANCAK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2656658; 7610040; 9278503 [H]