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The map label for this gene is 194334821

Identifier: 194334821

GI number: 194334821

Start: 2221860

End: 2222351

Strand: Reverse

Name: 194334821

Synonym: Paes_2024

Alternate gene names: NA

Gene position: 2222351-2221860 (Counterclockwise)

Preceding gene: 194334822

Following gene: 194334817

Centisome position: 88.44

GC content: 52.24

Gene sequence:

>492_bases
ATGAAGATGTTCTGGAGTTACGCACGGCTCGACGACATGGAGCCGAAACGCAAGGTATCGAAACTGCGCAAGGCGTTCGA
AAATGTCCTGTCGCAGACGCAGGGGACACCGTGTGACGTGTTTTTCGATCGTGATTCGTTGCACTGGGGTGTTGCATGGC
GTGAGGAGATCGAGCGTTCGATACGAGAGTGCGACGGCATCGTGGCGGTCGTTTCTCCATCCTACTTTAACCGCAGAATG
TGCTTGTACGAGCTGCAGATGGCCGTCGAAGCCCGGAAAAAGATTTTTCCGCTCTATTACAGGAGTTGCAGCGAGCTTCG
CAGCGCTTTCAAGGAGGACGGTGATGAAGCGGAGATCAACAGGGGTCTGAACAGCGCCTCTTTGATAATCACTGAGCTTC
AGATGATGGATTTTCGCGAGTTGCGTAACGAGAAGATCGGTTCTAAAAAGGTCGAGGATTTTCTGGATCGGATGGCGGAA
GTCGTTTCATGA

Upstream 100 bases:

>100_bases
GCGTGCTGGACGTGTTCATCTCCATCACCCGCTTCATGGAGGGGGAGGAGCCTCGCCCGTGGTGGCACTACAGCACCGAA
CGGAAAAAGATGTCTCACAC

Downstream 100 bases:

>100_bases
GATATTCGGATTCGAAAACATAGTATTTCACCATAACGCTCTGATGGCATCCTCAGTACGATGGAAAATCGGCCTTGCCT
GGCAGATCTGATTTGCTCAT

Product: TIR protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKMFWSYARLDDMEPKRKVSKLRKAFENVLSQTQGTPCDVFFDRDSLHWGVAWREEIERSIRECDGIVAVVSPSYFNRRM
CLYELQMAVEARKKIFPLYYRSCSELRSAFKEDGDEAEINRGLNSASLIITELQMMDFRELRNEKIGSKKVEDFLDRMAE
VVS

Sequences:

>Translated_163_residues
MKMFWSYARLDDMEPKRKVSKLRKAFENVLSQTQGTPCDVFFDRDSLHWGVAWREEIERSIRECDGIVAVVSPSYFNRRM
CLYELQMAVEARKKIFPLYYRSCSELRSAFKEDGDEAEINRGLNSASLIITELQMMDFRELRNEKIGSKKVEDFLDRMAE
VVS
>Mature_163_residues
MKMFWSYARLDDMEPKRKVSKLRKAFENVLSQTQGTPCDVFFDRDSLHWGVAWREEIERSIRECDGIVAVVSPSYFNRRM
CLYELQMAVEARKKIFPLYYRSCSELRSAFKEDGDEAEINRGLNSASLIITELQMMDFRELRNEKIGSKKVEDFLDRMAE
VVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19200; Mature: 19200

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMFWSYARLDDMEPKRKVSKLRKAFENVLSQTQGTPCDVFFDRDSLHWGVAWREEIERS
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECHHHHHHHHHH
IRECDGIVAVVSPSYFNRRMCLYELQMAVEARKKIFPLYYRSCSELRSAFKEDGDEAEIN
HHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RGLNSASLIITELQMMDFRELRNEKIGSKKVEDFLDRMAEVVS
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKMFWSYARLDDMEPKRKVSKLRKAFENVLSQTQGTPCDVFFDRDSLHWGVAWREEIERS
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECHHHHHHHHHH
IRECDGIVAVVSPSYFNRRMCLYELQMAVEARKKIFPLYYRSCSELRSAFKEDGDEAEIN
HHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RGLNSASLIITELQMMDFRELRNEKIGSKKVEDFLDRMAEVVS
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA