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The map label for this gene is 194334781

Identifier: 194334781

GI number: 194334781

Start: 2175842

End: 2176066

Strand: Reverse

Name: 194334781

Synonym: Paes_1982

Alternate gene names: NA

Gene position: 2176066-2175842 (Counterclockwise)

Preceding gene: 194334782

Following gene: 194334780

Centisome position: 86.6

GC content: 52.44

Gene sequence:

>225_bases
ATGACCATCGAGGACGCGGCATTTCTCCGAACGCTCTATATTCAGGAGCAGGGAACGGTTCTGCGGATCGAAAATGAGCG
GTTCAGGGTGACCGTGGGGGATGATGACGATGAGGATATCGTCAATATCCCGTCTATCAAAGTGGGGCAGATCGTGATTT
TCGGAGCGTGTATGGTGACTCCTGCAGCGATGAGGTTTTGCCTGAGTGTAGGAAGACCCGATTAG

Upstream 100 bases:

>100_bases
ACCTCCCGCTGTTTCGGCTGGGTGAATATTTGCATATCGGCAAGGGAACAGGGTTCGGTCTTGGAAAGTACCGGATTGCC
AAGGAAAGCGGGAAGACGCC

Downstream 100 bases:

>100_bases
ATACAGGGGAGGGGAAGGGAAGTGCTATGTGTTAGGTGTGAAGTGCTACGTTCTGAGTGCTGAGCAATGAGCAATGAGTG
ATGAGTGATGAGTGATGAGT

Product: CRISPR-associated protein Cas1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MTIEDAAFLRTLYIQEQGTVLRIENERFRVTVGDDDDEDIVNIPSIKVGQIVIFGACMVTPAAMRFCLSVGRPD

Sequences:

>Translated_74_residues
MTIEDAAFLRTLYIQEQGTVLRIENERFRVTVGDDDDEDIVNIPSIKVGQIVIFGACMVTPAAMRFCLSVGRPD
>Mature_73_residues
TIEDAAFLRTLYIQEQGTVLRIENERFRVTVGDDDDEDIVNIPSIKVGQIVIFGACMVTPAAMRFCLSVGRPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8262; Mature: 8130

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEDAAFLRTLYIQEQGTVLRIENERFRVTVGDDDDEDIVNIPSIKVGQIVIFGACMVT
CCCCHHHHEEEEEEECCCCEEEEECCEEEEEECCCCCCCEEECCCCCCCEEEEEHHHHHC
PAAMRFCLSVGRPD
HHHHHHHHHCCCCC
>Mature Secondary Structure 
TIEDAAFLRTLYIQEQGTVLRIENERFRVTVGDDDDEDIVNIPSIKVGQIVIFGACMVT
CCCHHHHEEEEEEECCCCEEEEECCEEEEEECCCCCCCEEECCCCCCCEEEEEHHHHHC
PAAMRFCLSVGRPD
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA