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The map label for this gene is yaeJ [C]

Identifier: 194334780

GI number: 194334780

Start: 2174119

End: 2174529

Strand: Reverse

Name: yaeJ [C]

Synonym: Paes_1981

Alternate gene names: 194334780

Gene position: 2174529-2174119 (Counterclockwise)

Preceding gene: 194334781

Following gene: 194334778

Centisome position: 86.53

GC content: 52.31

Gene sequence:

>411_bases
ATGCGTATCACTGATGCGATTGTTATTCCGGATTCTGAGATAGAGATTACTGCAATTCGTTCGCAGGGGCCGGGTGGTCA
GAATGTGAACAAGGTTGCGACGGCGGTGCAGCTGCGTTTTGTTATTGCATCGTCATCACTGCCTTACCGGTGCTGTCAGC
GGCTCTATGCTTTGCGTGATTGCCGAATCAGTGATGCCGGGGTTATTGTTATCAAGGCTGGCCGGTACCGGACGCAGGAG
AGCAACCGCCAGGATGCTTTTGAGCGTTTCCGACAGATTATCTGCAAGGCGCTTGAGGTGCCGAAAAAGAGAAAGGTGTC
GAGACCTACGGCCGGGTCGCGCGAAAAGCGGCTTGAAAGGAAAACCCGGAGAGGACAGATCAAGGCGATGCGGAAAAAAA
TTGATCTTTAA

Upstream 100 bases:

>100_bases
AATTCAATTGTAGGGTGCCCTTACGGGTGTGTGATGGGTTGGGCGAGTTTTAGATGACTTTATTGATGGTCGATAATAGA
TCGGGCAAGGACATGATGTT

Downstream 100 bases:

>100_bases
CAAAAAGGCTCCTGTTTCCAGGAGCCTTTTGAATTATTTGTGCGATTGGTTGTCAGTTCAAAGCTGTTGATGTCTCGATG
CTTTTCTTCGAGAGATTGGC

Product: Class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRITDAIVIPDSEIEITAIRSQGPGGQNVNKVATAVQLRFVIASSSLPYRCCQRLYALRDCRISDAGVIVIKAGRYRTQE
SNRQDAFERFRQIICKALEVPKKRKVSRPTAGSREKRLERKTRRGQIKAMRKKIDL

Sequences:

>Translated_136_residues
MRITDAIVIPDSEIEITAIRSQGPGGQNVNKVATAVQLRFVIASSSLPYRCCQRLYALRDCRISDAGVIVIKAGRYRTQE
SNRQDAFERFRQIICKALEVPKKRKVSRPTAGSREKRLERKTRRGQIKAMRKKIDL
>Mature_136_residues
MRITDAIVIPDSEIEITAIRSQGPGGQNVNKVATAVQLRFVIASSSLPYRCCQRLYALRDCRISDAGVIVIKAGRYRTQE
SNRQDAFERFRQIICKALEVPKKRKVSRPTAGSREKRLERKTRRGQIKAMRKKIDL

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=132, Percent_Identity=49.2424242424242, Blast_Score=122, Evalue=8e-30,
Organism=Drosophila melanogaster, GI19921098, Length=130, Percent_Identity=37.6923076923077, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15516; Mature: 15516

Theoretical pI: Translated: 11.38; Mature: 11.38

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITDAIVIPDSEIEITAIRSQGPGGQNVNKVATAVQLRFVIASSSLPYRCCQRLYALRD
CCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHC
CRISDAGVIVIKAGRYRTQESNRQDAFERFRQIICKALEVPKKRKVSRPTAGSREKRLER
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHH
KTRRGQIKAMRKKIDL
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRITDAIVIPDSEIEITAIRSQGPGGQNVNKVATAVQLRFVIASSSLPYRCCQRLYALRD
CCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHC
CRISDAGVIVIKAGRYRTQESNRQDAFERFRQIICKALEVPKKRKVSRPTAGSREKRLER
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHH
KTRRGQIKAMRKKIDL
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]