| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is asd [H]
Identifier: 194334748
GI number: 194334748
Start: 2130430
End: 2131449
Strand: Reverse
Name: asd [H]
Synonym: Paes_1949
Alternate gene names: 194334748
Gene position: 2131449-2130430 (Counterclockwise)
Preceding gene: 194334749
Following gene: 194334744
Centisome position: 84.82
GC content: 51.67
Gene sequence:
>1020_bases ATGAGCAGTACACAGAAAGGATACCGCGTTGCCATTCTGGGAGCGACCGGTCTTGTCGGCAGGACGATGCTGGACGTTCT TGAGGAAAGAAAATTTCCCGTCAGTGAGATTGTGCCCCTTGCTTCATCGAGGAGCAGAGGAAAGGAGATCGTGTTTGACG GCAGGACTTTTGTGACCCGGGAACCCTCGAAAGAGGTGTTTGCAGAGGTCGATATCGCACTGTTTTCAGCAGGGGCCGGT GCCAGTCATGAGTGGGCCCGTATCGCTGCTGAAGCCGGAGCTGTGGTGATTGATAATTCGTCTGCGTTTCGTATGGACCC CGACGTACCGCTCGTGGTTCCTGAAGTGAATCCTGAAGCTATTTTTGATGAGGACGGCAGACCGGAGATGATTATCGCCA ATCCTAACTGTTCAACCATTCAGATGGTTGTCGTTCTCAAGCCGCTTCATGACCGTTACAGGCTCAGGAGAGTTGTTGTA TCGACCTATCAGTCGGTGACGGGGAAGGGCAAGGCCGGTCGTGACGCTCTCGAAGCGGAGTTGGCAGGCACTGTCCCTGA ATCGTTCACTCATGTTCACCAGATCGCTTTTAACGCGATTCCGCATATCGATGTTTTTCAGGAGAACGGCTATACGAAGG AAGAACTGAAGATGGTCAACGAGACCAGAAAAATCATGGGAGACGACTCTCTTTCTGTCTCTCCCACGACGGTCAGAATT CCTGTTTACGGAGGGCATGGTGAATCGCTCAACATTGAGTTTGAAGAGGATTTTTCAGTTGACGATGTCCGGGAACTGCT CTCAAAGGCTCCTGGTGTGATTGTGCAGGATAATCCGTCGGCCAATCTCTATCCGATGCCCTTGTCGTCATATGAGAAAG ACGAGGTGTTTGTCGGTCGCATCCGTCGTGATTTATGGCATCCGAAAACGCTCAACATGTGGGTTGTCGCCGATAATCTC AGAAAAGGGGCTGCAACCAATGCCGTCCAGATCGCCGAACAGCTTATCGGACGGCTTTAA
Upstream 100 bases:
>100_bases GGCTATGAACGCGAAGGAAAGATCCGCGATTATGCGGAATTTCTCAATGACCATTCGAAGCGATTGACATTAAACTATTA GAAGAAAACAGACGATATTT
Downstream 100 bases:
>100_bases ACGCTCTTGTGCTATGCCGTGTCTGAGGGTGTCTCCAGTATTGTTGCGAGCGCTTTCAGCACGGCTGGTGTTTTCATGTT TTTTTTCCACTTGACCGCTT
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSSTQKGYRVAILGATGLVGRTMLDVLEERKFPVSEIVPLASSRSRGKEIVFDGRTFVTREPSKEVFAEVDIALFSAGAG ASHEWARIAAEAGAVVIDNSSAFRMDPDVPLVVPEVNPEAIFDEDGRPEMIIANPNCSTIQMVVVLKPLHDRYRLRRVVV STYQSVTGKGKAGRDALEAELAGTVPESFTHVHQIAFNAIPHIDVFQENGYTKEELKMVNETRKIMGDDSLSVSPTTVRI PVYGGHGESLNIEFEEDFSVDDVRELLSKAPGVIVQDNPSANLYPMPLSSYEKDEVFVGRIRRDLWHPKTLNMWVVADNL RKGAATNAVQIAEQLIGRL
Sequences:
>Translated_339_residues MSSTQKGYRVAILGATGLVGRTMLDVLEERKFPVSEIVPLASSRSRGKEIVFDGRTFVTREPSKEVFAEVDIALFSAGAG ASHEWARIAAEAGAVVIDNSSAFRMDPDVPLVVPEVNPEAIFDEDGRPEMIIANPNCSTIQMVVVLKPLHDRYRLRRVVV STYQSVTGKGKAGRDALEAELAGTVPESFTHVHQIAFNAIPHIDVFQENGYTKEELKMVNETRKIMGDDSLSVSPTTVRI PVYGGHGESLNIEFEEDFSVDDVRELLSKAPGVIVQDNPSANLYPMPLSSYEKDEVFVGRIRRDLWHPKTLNMWVVADNL RKGAATNAVQIAEQLIGRL >Mature_338_residues SSTQKGYRVAILGATGLVGRTMLDVLEERKFPVSEIVPLASSRSRGKEIVFDGRTFVTREPSKEVFAEVDIALFSAGAGA SHEWARIAAEAGAVVIDNSSAFRMDPDVPLVVPEVNPEAIFDEDGRPEMIIANPNCSTIQMVVVLKPLHDRYRLRRVVVS TYQSVTGKGKAGRDALEAELAGTVPESFTHVHQIAFNAIPHIDVFQENGYTKEELKMVNETRKIMGDDSLSVSPTTVRIP VYGGHGESLNIEFEEDFSVDDVRELLSKAPGVIVQDNPSANLYPMPLSSYEKDEVFVGRIRRDLWHPKTLNMWVVADNLR KGAATNAVQIAEQLIGRL
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=338, Percent_Identity=35.7988165680473, Blast_Score=208, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6320362, Length=391, Percent_Identity=28.6445012787724, Blast_Score=92, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37361; Mature: 37230
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTQKGYRVAILGATGLVGRTMLDVLEERKFPVSEIVPLASSRSRGKEIVFDGRTFVTR CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCEEEEC EPSKEVFAEVDIALFSAGAGASHEWARIAAEAGAVVIDNSSAFRMDPDVPLVVPEVNPEA CCCHHHHHHHEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEECCCCCC IFDEDGRPEMIIANPNCSTIQMVVVLKPLHDRYRLRRVVVSTYQSVTGKGKAGRDALEAE EECCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LAGTVPESFTHVHQIAFNAIPHIDVFQENGYTKEELKMVNETRKIMGDDSLSVSPTTVRI HHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE PVYGGHGESLNIEFEEDFSVDDVRELLSKAPGVIVQDNPSANLYPMPLSSYEKDEVFVGR EEECCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCCHHHHHH IRRDLWHPKTLNMWVVADNLRKGAATNAVQIAEQLIGRL HHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SSTQKGYRVAILGATGLVGRTMLDVLEERKFPVSEIVPLASSRSRGKEIVFDGRTFVTR CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEECCCEEEEC EPSKEVFAEVDIALFSAGAGASHEWARIAAEAGAVVIDNSSAFRMDPDVPLVVPEVNPEA CCCHHHHHHHEEEEEECCCCCCCHHHHHHHHCCEEEEECCCCEEECCCCCEEEECCCCCC IFDEDGRPEMIIANPNCSTIQMVVVLKPLHDRYRLRRVVVSTYQSVTGKGKAGRDALEAE EECCCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LAGTVPESFTHVHQIAFNAIPHIDVFQENGYTKEELKMVNETRKIMGDDSLSVSPTTVRI HHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE PVYGGHGESLNIEFEEDFSVDDVRELLSKAPGVIVQDNPSANLYPMPLSSYEKDEVFVGR EEECCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCCCHHHHHH IRRDLWHPKTLNMWVVADNLRKGAATNAVQIAEQLIGRL HHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]