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The map label for this gene is yrdA [H]

Identifier: 194334735

GI number: 194334735

Start: 2117836

End: 2118369

Strand: Reverse

Name: yrdA [H]

Synonym: Paes_1936

Alternate gene names: 194334735

Gene position: 2118369-2117836 (Counterclockwise)

Preceding gene: 194334741

Following gene: 194334734

Centisome position: 84.3

GC content: 55.43

Gene sequence:

>534_bases
ATGGCTAGCGTGTTGCCTTATCAGGGGATCTATCCAAAAATTCATGAATCGGTTTTTCTTGCCGAAGGAGCTTGTGTAAT
CGGCGATGTTGAGATCGGCGAGGGGTCGAGCGTCTGGTTCAACACGGTGATTCGTGGCGATGTCTGTCCGATCCGCATCG
GCTGCAGAACCAGCGTTCAGGATAATGCTACTCTGCATGTGACGCACGATACCGGTCCGCTTTCGATTGGAAGCGACGTG
ACTATCGGCCATGGAGCTGTTCTGCACGCATGCAATGTCAGGGATCACGTGCTTGTCGGAATGGGTGCTGTCCTGCTTGA
CGATGCCGTCATCGAACCATTTTCCATCGTTGCCGCGGGGGCGCTTGTCCGTCAGGGCTTTAGGGTTCCTTCCGGGATGC
TCGCAGCCGGAGTGCCGGCAAAGCTTATCAGGCCGGTGAGCGATGCCGAGCGTCAAACAATCAAGGAGTCCCCTCAGAAT
TATGTGCGCTATGTCAACACCTATCGTGAGGGAGGCTATGAGGGTAGGGGGTGA

Upstream 100 bases:

>100_bases
TTCATTGGTGAACGACGATGGAACGTGCCTGAAATTCTGCTCTGCCTGTAGCGTAAGTTTGCAAAGTTTTCTTGAATGTA
CAACTCATAACAAGGATACC

Downstream 100 bases:

>100_bases
TGGAAGGACGTCGGAAGTCGGGAGGTTGGCAGGCTCACTGCGGGGAGATGTGCACAGGAACTGATGGTGTTCTGCTGCGT
TTTGACTACATTATAAAACA

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MASVLPYQGIYPKIHESVFLAEGACVIGDVEIGEGSSVWFNTVIRGDVCPIRIGCRTSVQDNATLHVTHDTGPLSIGSDV
TIGHGAVLHACNVRDHVLVGMGAVLLDDAVIEPFSIVAAGALVRQGFRVPSGMLAAGVPAKLIRPVSDAERQTIKESPQN
YVRYVNTYREGGYEGRG

Sequences:

>Translated_177_residues
MASVLPYQGIYPKIHESVFLAEGACVIGDVEIGEGSSVWFNTVIRGDVCPIRIGCRTSVQDNATLHVTHDTGPLSIGSDV
TIGHGAVLHACNVRDHVLVGMGAVLLDDAVIEPFSIVAAGALVRQGFRVPSGMLAAGVPAKLIRPVSDAERQTIKESPQN
YVRYVNTYREGGYEGRG
>Mature_176_residues
ASVLPYQGIYPKIHESVFLAEGACVIGDVEIGEGSSVWFNTVIRGDVCPIRIGCRTSVQDNATLHVTHDTGPLSIGSDVT
IGHGAVLHACNVRDHVLVGMGAVLLDDAVIEPFSIVAAGALVRQGFRVPSGMLAAGVPAKLIRPVSDAERQTIKESPQNY
VRYVNTYREGGYEGRG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=181, Percent_Identity=43.646408839779, Blast_Score=158, Evalue=2e-40,
Organism=Escherichia coli, GI1787667, Length=155, Percent_Identity=39.3548387096774, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI87081681, Length=159, Percent_Identity=35.8490566037736, Blast_Score=96, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18814; Mature: 18683

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVLPYQGIYPKIHESVFLAEGACVIGDVEIGEGSSVWFNTVIRGDVCPIRIGCRTSVQ
CCCCCCCCCCCHHHHCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCC
DNATLHVTHDTGPLSIGSDVTIGHGAVLHACNVRDHVLVGMGAVLLDDAVIEPFSIVAAG
CCCEEEEEECCCCCCCCCCEEECCCEEEEECCCCCCHHHHCCHHHHHHHHCCHHHHHHHH
ALVRQGFRVPSGMLAAGVPAKLIRPVSDAERQTIKESPQNYVRYVNTYREGGYEGRG
HHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASVLPYQGIYPKIHESVFLAEGACVIGDVEIGEGSSVWFNTVIRGDVCPIRIGCRTSVQ
CCCCCCCCCCHHHHCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCC
DNATLHVTHDTGPLSIGSDVTIGHGAVLHACNVRDHVLVGMGAVLLDDAVIEPFSIVAAG
CCCEEEEEECCCCCCCCCCEEECCCEEEEECCCCCCHHHHCCHHHHHHHHCCHHHHHHHH
ALVRQGFRVPSGMLAAGVPAKLIRPVSDAERQTIKESPQNYVRYVNTYREGGYEGRG
HHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]