| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334671
Identifier: 194334671
GI number: 194334671
Start: 2045577
End: 2046383
Strand: Reverse
Name: 194334671
Synonym: Paes_1872
Alternate gene names: NA
Gene position: 2046383-2045577 (Counterclockwise)
Preceding gene: 194334672
Following gene: 194334670
Centisome position: 81.43
GC content: 49.81
Gene sequence:
>807_bases ATGGACGTACTGAAAAAAGGTTCACGAAAAGAACGAGCAGTCATTCTGCTCCAGATCATGCTTGCCGAAGCTGGCCTTCT TTCCAGTGTTGACGGCAAGTTCGGACAGGCTACCGATGAAGCCGTCAAGGCATTGCAACGCCAAAGCGGGCTTGTTGTCG ACGGGATTGTCGGAGAGAAAACCTGGACAACCCTGTTTTTGCAGTTTCCCGATCTGTTGCAGCGAATTACGGCTAAATAT CTTCAGGAAGCTGATATCAGATCTGCCGCATCGGATCTCAATGTTGAACTTGCCGCGGTCAAGGCGGTCAACGAGGTTGA ATCGACAGGGGCCGGTTTTATTGTTGATAAGCCGAAGATTCTTTTCGAGGGGCATATCTTCTGGAGAGAACTCAAGAAGA AGGGCATCGATCCCGAGGGTCATCGTCAGGGAAATGAAGATATTCTCTATCCGAAATGGACAACGGCCCACTACCAGGGA GGACTGGCAGAGTATGATCGACTCGAAAAGGCCAAGGGGATCGATGAGGAAGCTGCGCTTCGTTCTGCGTCATGGGGTAT TTTTCAGATTATGGGTTTTAACGCAGAAGAACTCGGCTACAGCGATGTCTATGACTTTGTTGAGCGAATGTTCAGTCATG AGAGGCATCATTTGCAGGCATTCTGCGCCTACGTGCGAAAGCATAATCTGGTTCAGGCTTTGCAGCTGAAAGATTGGAGA GCATTCGCGAGAGGCTACAACGGTCCTCGGTATGAAAAAAACCGCTACCACATCAAGCTTGCCAGGGCCTATGAGCGTTA CTGCTGA
Upstream 100 bases:
>100_bases TCGCTGCCCCGGATACAATCCGATCACTTCAGCGCTTTTTTTTTGACGGGCCATTATTGCAGGCTCACTCCCCAATTGTC AACTCTTACGGAGGATGAAT
Downstream 100 bases:
>100_bases AAACGGGAGTTTGTGCTGCAGATGAATCAATATTGCTCGAAAGGAGGGGACAAAGGGGATAAAAAAAAGACGACAGCTGA TCTGTCGTCTTTTTTTTGCT
Product: peptidoglycan-binding domain 1 protein
Products: NA
Alternate protein names: Bacteriophage-Acquired Protein; Phage-Related Cell Wall Hydrolase; Lytic Transglycosylase Catalytic; Phage-Like Protein; DNA-Directed RNA Polymerase Beta Chain; Lytic Phage PhiCTX_orf; Gp43 Bacteriophage-Acquired Protein; LysM Domain Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MDVLKKGSRKERAVILLQIMLAEAGLLSSVDGKFGQATDEAVKALQRQSGLVVDGIVGEKTWTTLFLQFPDLLQRITAKY LQEADIRSAASDLNVELAAVKAVNEVESTGAGFIVDKPKILFEGHIFWRELKKKGIDPEGHRQGNEDILYPKWTTAHYQG GLAEYDRLEKAKGIDEEAALRSASWGIFQIMGFNAEELGYSDVYDFVERMFSHERHHLQAFCAYVRKHNLVQALQLKDWR AFARGYNGPRYEKNRYHIKLARAYERYC
Sequences:
>Translated_268_residues MDVLKKGSRKERAVILLQIMLAEAGLLSSVDGKFGQATDEAVKALQRQSGLVVDGIVGEKTWTTLFLQFPDLLQRITAKY LQEADIRSAASDLNVELAAVKAVNEVESTGAGFIVDKPKILFEGHIFWRELKKKGIDPEGHRQGNEDILYPKWTTAHYQG GLAEYDRLEKAKGIDEEAALRSASWGIFQIMGFNAEELGYSDVYDFVERMFSHERHHLQAFCAYVRKHNLVQALQLKDWR AFARGYNGPRYEKNRYHIKLARAYERYC >Mature_268_residues MDVLKKGSRKERAVILLQIMLAEAGLLSSVDGKFGQATDEAVKALQRQSGLVVDGIVGEKTWTTLFLQFPDLLQRITAKY LQEADIRSAASDLNVELAAVKAVNEVESTGAGFIVDKPKILFEGHIFWRELKKKGIDPEGHRQGNEDILYPKWTTAHYQG GLAEYDRLEKAKGIDEEAALRSASWGIFQIMGFNAEELGYSDVYDFVERMFSHERHHLQAFCAYVRKHNLVQALQLKDWR AFARGYNGPRYEKNRYHIKLARAYERYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30574; Mature: 30574
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLKKGSRKERAVILLQIMLAEAGLLSSVDGKFGQATDEAVKALQRQSGLVVDGIVGEK CCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCH TWTTLFLQFPDLLQRITAKYLQEADIRSAASDLNVELAAVKAVNEVESTGAGFIVDKPKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCCEEEECCCE LFEGHIFWRELKKKGIDPEGHRQGNEDILYPKWTTAHYQGGLAEYDRLEKAKGIDEEAAL EEEHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH RSASWGIFQIMGFNAEELGYSDVYDFVERMFSHERHHLQAFCAYVRKHNLVQALQLKDWR HHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFARGYNGPRYEKNRYHIKLARAYERYC HHHCCCCCCCCCCCCEEEEHHHHHHHCC >Mature Secondary Structure MDVLKKGSRKERAVILLQIMLAEAGLLSSVDGKFGQATDEAVKALQRQSGLVVDGIVGEK CCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHCCCEEECCCCCH TWTTLFLQFPDLLQRITAKYLQEADIRSAASDLNVELAAVKAVNEVESTGAGFIVDKPKI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCCEEEECCCE LFEGHIFWRELKKKGIDPEGHRQGNEDILYPKWTTAHYQGGLAEYDRLEKAKGIDEEAAL EEEHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH RSASWGIFQIMGFNAEELGYSDVYDFVERMFSHERHHLQAFCAYVRKHNLVQALQLKDWR HHCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFARGYNGPRYEKNRYHIKLARAYERYC HHHCCCCCCCCCCCCEEEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA