| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334545
Identifier: 194334545
GI number: 194334545
Start: 1902207
End: 1902641
Strand: Reverse
Name: 194334545
Synonym: Paes_1740
Alternate gene names: NA
Gene position: 1902641-1902207 (Counterclockwise)
Preceding gene: 194334546
Following gene: 194334544
Centisome position: 75.71
GC content: 50.57
Gene sequence:
>435_bases ATGTCTGATATACGCGTGATTCTCTGTCCAGTCAATTTTTCACTGGAGTCGCGTGCAGCTCTGGCTCATGCAAGGGAAAT TGCTTCAAGTACGGGGGCTTCGATTGTGCTGCTGCATGCCATAGACCTGGTGGGGGATGATGAGGGTCTTGTTGCAATGT TGGCACAAGAAGAGGATGACGAGGCCTGCCCTGAAACACGAATCTCCATGCTTGCTGATGAGCTTGCAGGAGATGGCTGT GACGTGCGGTATTTGTTGGAATATGGTGATCCTGCACAGGTGATCTGCAAGCAGGCCGAATTGCTTGGTGCAGATATGAT CATCATGACAACAGCAGCCAGGAAGGGGATGAAGCGATTGCTCATGGGCAGTACAGCCGAAAATGTGATTCGTGATGCCG AGTGCCCTGTGGTAGTGGTGAAAGGAAAAAAATAG
Upstream 100 bases:
>100_bases GCGTTGAGCAAGTGTTGAATTATGTATTACCGAGGATCAGGGCATAAGGTGTACGAACCTTCGGGGATGTATGGATTGCA TAATATTATTGGAGAAATAG
Downstream 100 bases:
>100_bases AGAGAATATGTGTGGAATAGTAGGATATATCGGGCAGCAGGAAGCTGCCCCTTTGCTTTTAAAGGGGTTGCAGCGGCTGG AATACCGTGGGTATGATTCT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSDIRVILCPVNFSLESRAALAHAREIASSTGASIVLLHAIDLVGDDEGLVAMLAQEEDDEACPETRISMLADELAGDGC DVRYLLEYGDPAQVICKQAELLGADMIIMTTAARKGMKRLLMGSTAENVIRDAECPVVVVKGKK
Sequences:
>Translated_144_residues MSDIRVILCPVNFSLESRAALAHAREIASSTGASIVLLHAIDLVGDDEGLVAMLAQEEDDEACPETRISMLADELAGDGC DVRYLLEYGDPAQVICKQAELLGADMIIMTTAARKGMKRLLMGSTAENVIRDAECPVVVVKGKK >Mature_143_residues SDIRVILCPVNFSLESRAALAHAREIASSTGASIVLLHAIDLVGDDEGLVAMLAQEEDDEACPETRISMLADELAGDGCD VRYLLEYGDPAQVICKQAELLGADMIIMTTAARKGMKRLLMGSTAENVIRDAECPVVVVKGKK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15405; Mature: 15274
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIRVILCPVNFSLESRAALAHAREIASSTGASIVLLHAIDLVGDDEGLVAMLAQEEDD CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCEEEEEECCCCC EACPETRISMLADELAGDGCDVRYLLEYGDPAQVICKQAELLGADMIIMTTAARKGMKRL CCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH LMGSTAENVIRDAECPVVVVKGKK HHCCCHHHHHCCCCCCEEEEECCC >Mature Secondary Structure SDIRVILCPVNFSLESRAALAHAREIASSTGASIVLLHAIDLVGDDEGLVAMLAQEEDD CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCEEEEEECCCCC EACPETRISMLADELAGDGCDVRYLLEYGDPAQVICKQAELLGADMIIMTTAARKGMKRL CCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH LMGSTAENVIRDAECPVVVVKGKK HHCCCHHHHHCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]