| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334425
Identifier: 194334425
GI number: 194334425
Start: 1762093
End: 1764489
Strand: Reverse
Name: 194334425
Synonym: Paes_1620
Alternate gene names: NA
Gene position: 1764489-1762093 (Counterclockwise)
Preceding gene: 194334426
Following gene: 194334424
Centisome position: 70.22
GC content: 52.52
Gene sequence:
>2397_bases ATGAGCGATGCAGTCTGTGATCAAGGTTTTCTGCAGCCTCTTTCTGCTGAACAGCTTGAACGTATCAATGCATACTGGAG GGCGGCTAATTATCTTTCGGTTGGTCAGATCTATCTTATGGATAACCCTCTTCTTCGGGTTCCACTGCGTGCGGAGCATG TCAAACCGCGACTTCTGGGGCACTGGGGAACGACGCCCGGCTTGAACTTCATCTATGCGCATCTCAATCGTGTTATCAGG GCGCGTGATCTCAATCTGATTTATATTGCCGGCCCTGGCCATGGTGGTCCGGCGCTTGTGGCCAATGTCTGGATGGAAGG GACGTACAGTCAATATTATCCTGATGTTTCTTTCGATGAACAGGGGATGAAACGACTTTTCCGTCAGTTTTCATTTCCCG GCGGCATACCGAGCCATGTTGCCCCGGAAACGCCCGGTTCAATCAACGAGGGTGGGGAACTTGGCTATTGTCTCTCTCAC GCCTTCGGAGCTGTTTTCGACAACCCTGATCTTGTCGCGGCATGCGTCATCGGAGACGGTGAGGCAGAAACAGGCCCTCT TGCAGCAGCATGGCACAGCAATAAATTTCTCAATCCCAGGCGCGACGGAGCGGTGCTGCCGGTGCTGCATCTCAATGGCT ATAAAATCGCCAATCCTACGATTCTTGCCCGTTTACCCCGACAAGAGCTTGAGCGTCTTATGCGCGGATATGGATATAAC CCCTGTTTTGTCGAGGGCAGTGATCCTTTCGTCATGCATCAGGCTATGGCGGCTGCCATGGACAACTGTTTTGACGAGAT TCGAGAGATTCAGAGGCAGGCAAGGCAGGAGGAGGGGGTCGTCAAGCGTCCTCTTTGGCCGATGATCGTCCTGCGCTCTC CAAAAGGATGGACAGGGCCAAAAGAGGTCGACGGCAAGAAGACTGAGGATTTCTGGCGTTCCCATCAGGTGCCGTTTGCT GCGGTGAGAGAAAATCCGGACCATTTGAAGCTGCTCGAATCGTGGATGAAAAGCTACAGGCCCGAGGAGCTCTTTACATC GGAGGGGGAGCTTATAGCTGAACTTCGCGAGCTTGCTCCGACCGGGAGACGTCGAATGGGAGATAATCCTCATGCCAACG GGGGAGTGCTTCTGCAGGGGTTGCATATGCCTGATTTTCAGGACTATGCCGTCAAGGTTCCCGAGCCGGGTTCTGTGATC GCCGAGGCACCGATACCGATGGCCCGGTTTCTGCGCGATGTGATGCGGCTCAACGAATCAGCAGCGAATTTCAGGGTTTT CGGTCCTGATGAAACGGCCTCAAACCGCCTTGGCGATCTTTTTGAAGAGACTGATCGCGCCTGGATGGCTGAGATTATTG CTGATGATGACCATCTTTCACCTGATGGCCGTGTTATGGAGATCCTTTCGGAGCATACCTGCCAGGGATGGCTGGAGGGC TATCTGCTGACCGGTCGGCACGGTTTTTTTTCCTGTTATGAGGCGTTTATTCATATCATTGATTCCATGTTCAATCAGCA TGCCAAGTGGCTGAAGGTGACCAACGATGAAATTCCATGGAGACGGCCGATTGCATCGCTCAACTATTTTCTGACATCGC ACGTCTGGCGTCAGGACCATAACGGTTTTTCGCATCAGGATCCAGGTTTTATCGATCATGTTGTCAATAAAAAGGCTGAT GTCATCCGTGTCTATCTTCCGCCCGATGCCAATACTCTGCTCTCCATAACGGATCACTGTCTTCGTTCGCGCAACTATAT CAACGTGATTGTTGCCGGTAAGCAGCCCGCGTTCCAGTGGCTTGATATGGATTCGGCCGTTAAACACTGTTCAAGTGGTA TCGGGATATGGGAGTGGGCGTCGAGCGATATCGAAGACGGAGATCCTGATGTGGTTATGGCCTGCGCCGGCGATGTTCCT ACGCTTGAGACGCTCGCTGCAGTTGATATTCTCCGTTCACAACTGCCCGATCTGAAGATTCGGGTCGTGAATGTGATCGA CCTGATGACCCTGCAGCCGCAGGAGGAACATCCTCACGGGCTTCCGGACCGGCATTTTGATGACATTTTTACCACGGATA AGCCTGTGATTTTTGCCTATCACGGCTATCCCTGGCTGATCCACCGGCTCACCTATCGCAGGACCAATCATCGAAATCTC CATGTGCGGGGATACAAGGAAGAAGGGACGACTACAACGCCATTCGATATGGTGGTGATGAACGATCTCGACCGTTTTCA TCTGGTTGCCGATGTTGTCGACAGGGTGCCTCGACTGCGTCAGAGGGCAGCGTATGTCAAGCAGTATGTGCGAGACCGGC TGATCGAACATAAGCAGTATATTCGAACGTATGGAGAGGATATGCCTGAGATCCGTGAATGGAAATGGAACTGGTGA
Upstream 100 bases:
>100_bases CTCATGAATGAACAGGCGAGACTGATGGGTGAGTGTCGTGTTCGGGATTATGGTGTTTGGTAGTCATTTTTTTCAGTACA ATTGAAAACGGAGTCGATTC
Downstream 100 bases:
>100_bases GGGTCGGAAAGCCAAAAAGACAAGAAAGGAGCGGTTGTTTGTGCTGTCCGGGGGACAGGTGACAGGGGCGGACAGAGGGA GGATACATGAATTATTTCTT
Product: putative phosphoketolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 798; Mature: 797
Protein sequence:
>798_residues MSDAVCDQGFLQPLSAEQLERINAYWRAANYLSVGQIYLMDNPLLRVPLRAEHVKPRLLGHWGTTPGLNFIYAHLNRVIR ARDLNLIYIAGPGHGGPALVANVWMEGTYSQYYPDVSFDEQGMKRLFRQFSFPGGIPSHVAPETPGSINEGGELGYCLSH AFGAVFDNPDLVAACVIGDGEAETGPLAAAWHSNKFLNPRRDGAVLPVLHLNGYKIANPTILARLPRQELERLMRGYGYN PCFVEGSDPFVMHQAMAAAMDNCFDEIREIQRQARQEEGVVKRPLWPMIVLRSPKGWTGPKEVDGKKTEDFWRSHQVPFA AVRENPDHLKLLESWMKSYRPEELFTSEGELIAELRELAPTGRRRMGDNPHANGGVLLQGLHMPDFQDYAVKVPEPGSVI AEAPIPMARFLRDVMRLNESAANFRVFGPDETASNRLGDLFEETDRAWMAEIIADDDHLSPDGRVMEILSEHTCQGWLEG YLLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKVTNDEIPWRRPIASLNYFLTSHVWRQDHNGFSHQDPGFIDHVVNKKAD VIRVYLPPDANTLLSITDHCLRSRNYINVIVAGKQPAFQWLDMDSAVKHCSSGIGIWEWASSDIEDGDPDVVMACAGDVP TLETLAAVDILRSQLPDLKIRVVNVIDLMTLQPQEEHPHGLPDRHFDDIFTTDKPVIFAYHGYPWLIHRLTYRRTNHRNL HVRGYKEEGTTTTPFDMVVMNDLDRFHLVADVVDRVPRLRQRAAYVKQYVRDRLIEHKQYIRTYGEDMPEIREWKWNW
Sequences:
>Translated_798_residues MSDAVCDQGFLQPLSAEQLERINAYWRAANYLSVGQIYLMDNPLLRVPLRAEHVKPRLLGHWGTTPGLNFIYAHLNRVIR ARDLNLIYIAGPGHGGPALVANVWMEGTYSQYYPDVSFDEQGMKRLFRQFSFPGGIPSHVAPETPGSINEGGELGYCLSH AFGAVFDNPDLVAACVIGDGEAETGPLAAAWHSNKFLNPRRDGAVLPVLHLNGYKIANPTILARLPRQELERLMRGYGYN PCFVEGSDPFVMHQAMAAAMDNCFDEIREIQRQARQEEGVVKRPLWPMIVLRSPKGWTGPKEVDGKKTEDFWRSHQVPFA AVRENPDHLKLLESWMKSYRPEELFTSEGELIAELRELAPTGRRRMGDNPHANGGVLLQGLHMPDFQDYAVKVPEPGSVI AEAPIPMARFLRDVMRLNESAANFRVFGPDETASNRLGDLFEETDRAWMAEIIADDDHLSPDGRVMEILSEHTCQGWLEG YLLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKVTNDEIPWRRPIASLNYFLTSHVWRQDHNGFSHQDPGFIDHVVNKKAD VIRVYLPPDANTLLSITDHCLRSRNYINVIVAGKQPAFQWLDMDSAVKHCSSGIGIWEWASSDIEDGDPDVVMACAGDVP TLETLAAVDILRSQLPDLKIRVVNVIDLMTLQPQEEHPHGLPDRHFDDIFTTDKPVIFAYHGYPWLIHRLTYRRTNHRNL HVRGYKEEGTTTTPFDMVVMNDLDRFHLVADVVDRVPRLRQRAAYVKQYVRDRLIEHKQYIRTYGEDMPEIREWKWNW >Mature_797_residues SDAVCDQGFLQPLSAEQLERINAYWRAANYLSVGQIYLMDNPLLRVPLRAEHVKPRLLGHWGTTPGLNFIYAHLNRVIRA RDLNLIYIAGPGHGGPALVANVWMEGTYSQYYPDVSFDEQGMKRLFRQFSFPGGIPSHVAPETPGSINEGGELGYCLSHA FGAVFDNPDLVAACVIGDGEAETGPLAAAWHSNKFLNPRRDGAVLPVLHLNGYKIANPTILARLPRQELERLMRGYGYNP CFVEGSDPFVMHQAMAAAMDNCFDEIREIQRQARQEEGVVKRPLWPMIVLRSPKGWTGPKEVDGKKTEDFWRSHQVPFAA VRENPDHLKLLESWMKSYRPEELFTSEGELIAELRELAPTGRRRMGDNPHANGGVLLQGLHMPDFQDYAVKVPEPGSVIA EAPIPMARFLRDVMRLNESAANFRVFGPDETASNRLGDLFEETDRAWMAEIIADDDHLSPDGRVMEILSEHTCQGWLEGY LLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKVTNDEIPWRRPIASLNYFLTSHVWRQDHNGFSHQDPGFIDHVVNKKADV IRVYLPPDANTLLSITDHCLRSRNYINVIVAGKQPAFQWLDMDSAVKHCSSGIGIWEWASSDIEDGDPDVVMACAGDVPT LETLAAVDILRSQLPDLKIRVVNVIDLMTLQPQEEHPHGLPDRHFDDIFTTDKPVIFAYHGYPWLIHRLTYRRTNHRNLH VRGYKEEGTTTTPFDMVVMNDLDRFHLVADVVDRVPRLRQRAAYVKQYVRDRLIEHKQYIRTYGEDMPEIREWKWNW
Specific function: Unknown
COG id: COG3957
COG function: function code G; Phosphoketolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the XFP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR005593 - InterPro: IPR018969 - InterPro: IPR019790 - InterPro: IPR018970 - InterPro: IPR019789 [H]
Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]
EC number: NA
Molecular weight: Translated: 91065; Mature: 90933
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVCDQGFLQPLSAEQLERINAYWRAANYLSVGQIYLMDNPLLRVPLRAEHVKPRLLG CCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCEEECEEEEECCCEEECCCCHHHCCCHHEE HWGTTPGLNFIYAHLNRVIRARDLNLIYIAGPGHGGPALVANVWMEGTYSQYYPDVSFDE CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHCCCCCCCH QGMKRLFRQFSFPGGIPSHVAPETPGSINEGGELGYCLSHAFGAVFDNPDLVAACVIGDG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC EAETGPLAAAWHSNKFLNPRRDGAVLPVLHLNGYKIANPTILARLPRQELERLMRGYGYN CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEECCCHHEECCCHHHHHHHHHHCCCC PCFVEGSDPFVMHQAMAAAMDNCFDEIREIQRQARQEEGVVKRPLWPMIVLRSPKGWTGP CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC KEVDGKKTEDFWRSHQVPFAAVRENPDHLKLLESWMKSYRPEELFTSEGELIAELRELAP CCCCCCCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCC TGRRRMGDNPHANGGVLLQGLHMPDFQDYAVKVPEPGSVIAEAPIPMARFLRDVMRLNES CHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHCCC AANFRVFGPDETASNRLGDLFEETDRAWMAEIIADDDHLSPDGRVMEILSEHTCQGWLEG CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC YLLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKVTNDEIPWRRPIASLNYFLTSHVWRQDH EEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC NGFSHQDPGFIDHVVNKKADVIRVYLPPDANTLLSITDHCLRSRNYINVIVAGKQPAFQW CCCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHH LDMDSAVKHCSSGIGIWEWASSDIEDGDPDVVMACAGDVPTLETLAAVDILRSQLPDLKI CCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE RVVNVIDLMTLQPQEEHPHGLPDRHFDDIFTTDKPVIFAYHGYPWLIHRLTYRRTNHRNL EEEEHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEE HVRGYKEEGTTTTPFDMVVMNDLDRFHLVADVVDRVPRLRQRAAYVKQYVRDRLIEHKQY EEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTYGEDMPEIREWKWNW HHHHCCCCCHHHCCCCCC >Mature Secondary Structure SDAVCDQGFLQPLSAEQLERINAYWRAANYLSVGQIYLMDNPLLRVPLRAEHVKPRLLG CCCCCCCHHCCCCCHHHHHHHHHHHHHCCCEEECEEEEECCCEEECCCCHHHCCCHHEE HWGTTPGLNFIYAHLNRVIRARDLNLIYIAGPGHGGPALVANVWMEGTYSQYYPDVSFDE CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHCCCCCCCH QGMKRLFRQFSFPGGIPSHVAPETPGSINEGGELGYCLSHAFGAVFDNPDLVAACVIGDG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC EAETGPLAAAWHSNKFLNPRRDGAVLPVLHLNGYKIANPTILARLPRQELERLMRGYGYN CCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCEEECCCHHEECCCHHHHHHHHHHCCCC PCFVEGSDPFVMHQAMAAAMDNCFDEIREIQRQARQEEGVVKRPLWPMIVLRSPKGWTGP CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC KEVDGKKTEDFWRSHQVPFAAVRENPDHLKLLESWMKSYRPEELFTSEGELIAELRELAP CCCCCCCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCC TGRRRMGDNPHANGGVLLQGLHMPDFQDYAVKVPEPGSVIAEAPIPMARFLRDVMRLNES CHHHHCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHCCC AANFRVFGPDETASNRLGDLFEETDRAWMAEIIADDDHLSPDGRVMEILSEHTCQGWLEG CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC YLLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKVTNDEIPWRRPIASLNYFLTSHVWRQDH EEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC NGFSHQDPGFIDHVVNKKADVIRVYLPPDANTLLSITDHCLRSRNYINVIVAGKQPAFQW CCCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHH LDMDSAVKHCSSGIGIWEWASSDIEDGDPDVVMACAGDVPTLETLAAVDILRSQLPDLKI CCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE RVVNVIDLMTLQPQEEHPHGLPDRHFDDIFTTDKPVIFAYHGYPWLIHRLTYRRTNHRNL EEEEHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCEE HVRGYKEEGTTTTPFDMVVMNDLDRFHLVADVVDRVPRLRQRAAYVKQYVRDRLIEHKQY EEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRTYGEDMPEIREWKWNW HHHHCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]