| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is yxiO [H]
Identifier: 194334279
GI number: 194334279
Start: 1612085
End: 1613344
Strand: Reverse
Name: yxiO [H]
Synonym: Paes_1472
Alternate gene names: 194334279
Gene position: 1613344-1612085 (Counterclockwise)
Preceding gene: 194334280
Following gene: 194334278
Centisome position: 64.2
GC content: 48.17
Gene sequence:
>1260_bases GTGTCATCGAAGCGAACCATAGTATCCTGGCTGATGTTTGATTTTGCCAACACATCATTCAGTGTCATGATGGTGACGTT TGCATTTCCTCTCTATTTTAAAAATATCATCTGCGGCGCAGAAGCCTGGGGCGATGCCATGTGGGGCGTCAGCGTCAGTG TTTCGATGTTTGTTGTAGCCATTATCTCCCCGTTTCTCGGTGCGGCCGCCGATATGTCCGGCAGGCGGAAACGTTTTCTT CTCATTTTCACACTGATGGCAGTTCTTGCAACCGTGCTGCTTGGCTTTACCGGGCCGGGTATGGCCGTTTTTGCAGCCCT GCTTTTTATTGTCGCCAATGTCGGTTTTGAGGGCGGACTTGTCTTTTATGACGCATATTTGCCTGAAATCGCTTCTGAAC GAAGCATCGGGAGACTCTCCGGGTATGGTTTTGCCATGGGGTATTTCGGTGCGCTGACTATTTTGCTGCTGCTTTTTCCC CTTCTTAAAGGGGGTATTGTTCTGGAAAACAGCCAGAATATCAGAAAGAGCTTCTTTGTCGTTGCCCTGTTTTTTGCTCT TTTTTCAGCACCGCTTTTTCTTGCCCTCAGGGATAGAAAAAAAACGGAGCTTCCCGGCAGAACGTTTATGAGCTCAATTC GCGAGGTACGCTATACCATCATGCATATCATGAATTATCCTGACCTTGCGCGTTTTTTGCTCGCATTTTTCTTTTACAAC GACGCCATTCTGACGGTTATCGCATTTTCTTCGATCTATGCACAAAATACGCTGGGTTTTACAACCTCAGAGCTGATCGT CTTTTTTATGATCGTTCAGACGACAGCAATCATCGGCTCGATCGTCTTCGGCATAATCACCGATCGAATAGGCCCCAAAA GGACGATTGTACTGACACTCTTTATATGGTGCGCCGTTATCGTTATGGCGATCATGACTCGTGAAAAAACTTTTTTTTAC TATACCGGTCTGCTTGCAGGTATGTCGATGGGTTCCTCTCAGGCAGCGTCTCGTTCCATGATGGCCAGGCTGACGCCTAA GGAACATGTGACAGAGTTTTTCGGTTTCTATGATGGCACCTTCGGCAAGGCTTCAGCAATTCTCGGCCCGGTGATTTTCG GTGTTGTTTCCGTCCAGGCAGGTGATCAGCGATATGCTCTCGCATCGCTCCTGTTCTTTTTTATTCTCGGTCTGGTCTGT ATTCTGCCTGTTCGTTCCAGCAGCACAGCTCTTCGGGCCGTTTCCCGGTCGGATGCATGA
Upstream 100 bases:
>100_bases GGGTACCCGGATATCATCGATTTCCGGTACACTGGAGCAAGCTTTTTCCTCCTCGGTCGCTGCCTGGCGTTTTTTCCCGC AACTGTAATCACCATAATTC
Downstream 100 bases:
>100_bases TATATAGATGAAAAAGAGTAGATTGAGAGCAGGGAAAGACAAGCCAAACCGGCCGTAAGGAGTTATGCCTTCATCTGAAC ATTCATTCATCTCTGTACCA
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSSKRTIVSWLMFDFANTSFSVMMVTFAFPLYFKNIICGAEAWGDAMWGVSVSVSMFVVAIISPFLGAAADMSGRRKRFL LIFTLMAVLATVLLGFTGPGMAVFAALLFIVANVGFEGGLVFYDAYLPEIASERSIGRLSGYGFAMGYFGALTILLLLFP LLKGGIVLENSQNIRKSFFVVALFFALFSAPLFLALRDRKKTELPGRTFMSSIREVRYTIMHIMNYPDLARFLLAFFFYN DAILTVIAFSSIYAQNTLGFTTSELIVFFMIVQTTAIIGSIVFGIITDRIGPKRTIVLTLFIWCAVIVMAIMTREKTFFY YTGLLAGMSMGSSQAASRSMMARLTPKEHVTEFFGFYDGTFGKASAILGPVIFGVVSVQAGDQRYALASLLFFFILGLVC ILPVRSSSTALRAVSRSDA
Sequences:
>Translated_419_residues MSSKRTIVSWLMFDFANTSFSVMMVTFAFPLYFKNIICGAEAWGDAMWGVSVSVSMFVVAIISPFLGAAADMSGRRKRFL LIFTLMAVLATVLLGFTGPGMAVFAALLFIVANVGFEGGLVFYDAYLPEIASERSIGRLSGYGFAMGYFGALTILLLLFP LLKGGIVLENSQNIRKSFFVVALFFALFSAPLFLALRDRKKTELPGRTFMSSIREVRYTIMHIMNYPDLARFLLAFFFYN DAILTVIAFSSIYAQNTLGFTTSELIVFFMIVQTTAIIGSIVFGIITDRIGPKRTIVLTLFIWCAVIVMAIMTREKTFFY YTGLLAGMSMGSSQAASRSMMARLTPKEHVTEFFGFYDGTFGKASAILGPVIFGVVSVQAGDQRYALASLLFFFILGLVC ILPVRSSSTALRAVSRSDA >Mature_418_residues SSKRTIVSWLMFDFANTSFSVMMVTFAFPLYFKNIICGAEAWGDAMWGVSVSVSMFVVAIISPFLGAAADMSGRRKRFLL IFTLMAVLATVLLGFTGPGMAVFAALLFIVANVGFEGGLVFYDAYLPEIASERSIGRLSGYGFAMGYFGALTILLLLFPL LKGGIVLENSQNIRKSFFVVALFFALFSAPLFLALRDRKKTELPGRTFMSSIREVRYTIMHIMNYPDLARFLLAFFFYND AILTVIAFSSIYAQNTLGFTTSELIVFFMIVQTTAIIGSIVFGIITDRIGPKRTIVLTLFIWCAVIVMAIMTREKTFFYY TGLLAGMSMGSSQAASRSMMARLTPKEHVTEFFGFYDGTFGKASAILGPVIFGVVSVQAGDQRYALASLLFFFILGLVCI LPVRSSSTALRAVSRSDA
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46147; Mature: 46016
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKRTIVSWLMFDFANTSFSVMMVTFAFPLYFKNIICGAEAWGDAMWGVSVSVSMFVVA CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH IISPFLGAAADMSGRRKRFLLIFTLMAVLATVLLGFTGPGMAVFAALLFIVANVGFEGGL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCE VFYDAYLPEIASERSIGRLSGYGFAMGYFGALTILLLLFPLLKGGIVLENSQNIRKSFFV EEEHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH VALFFALFSAPLFLALRDRKKTELPGRTFMSSIREVRYTIMHIMNYPDLARFLLAFFFYN HHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DAILTVIAFSSIYAQNTLGFTTSELIVFFMIVQTTAIIGSIVFGIITDRIGPKRTIVLTL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FIWCAVIVMAIMTREKTFFYYTGLLAGMSMGSSQAASRSMMARLTPKEHVTEFFGFYDGT HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCC FGKASAILGPVIFGVVSVQAGDQRYALASLLFFFILGLVCILPVRSSSTALRAVSRSDA CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure SSKRTIVSWLMFDFANTSFSVMMVTFAFPLYFKNIICGAEAWGDAMWGVSVSVSMFVVA CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH IISPFLGAAADMSGRRKRFLLIFTLMAVLATVLLGFTGPGMAVFAALLFIVANVGFEGGL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCE VFYDAYLPEIASERSIGRLSGYGFAMGYFGALTILLLLFPLLKGGIVLENSQNIRKSFFV EEEHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH VALFFALFSAPLFLALRDRKKTELPGRTFMSSIREVRYTIMHIMNYPDLARFLLAFFFYN HHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DAILTVIAFSSIYAQNTLGFTTSELIVFFMIVQTTAIIGSIVFGIITDRIGPKRTIVLTL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FIWCAVIVMAIMTREKTFFYYTGLLAGMSMGSSQAASRSMMARLTPKEHVTEFFGFYDGT HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCC FGKASAILGPVIFGVVSVQAGDQRYALASLLFFFILGLVCILPVRSSSTALRAVSRSDA CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]