| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194333810
Identifier: 194333810
GI number: 194333810
Start: 1081293
End: 1082318
Strand: Reverse
Name: 194333810
Synonym: Paes_0983
Alternate gene names: NA
Gene position: 1082318-1081293 (Counterclockwise)
Preceding gene: 194333811
Following gene: 194333809
Centisome position: 43.07
GC content: 36.74
Gene sequence:
>1026_bases ATGACAAGACTGATAGTACACATAGGATATCCAAAGTGTGCCAGCACCACTTTGCAGGAAATAGTATTTCCAAGTATTCT TGGCGAAAGACATTTCGGCATAGCGCGACACAATGGGCGAAGAAAAGACCAGTGGCGATTTCTCTATAACATTCTTTTCC CGGACGGAAATTTAAGCACACTCCCGCCAGAATTACGATTAACGGGATGCCAAAAAAGTGACGATATATCTGCAAAATCT GTAAATGACCCTCTTGACTGGTTGAACGACGGTGCATTATCGAAAATGCTTACACCAGGAGCTGTAAACGTCTTTTCCGC TGAGCAATTTTTATTCCCATATCGTTCTCAATTCAGACATAATGGAGGCGAAAGACTGAAAAGATTATTTGATGATGGTT CAGTAACATTTACGGTATTAATCATTATTCGCAATCAGGCAGATTTAGTCACCAGTTATGTAGCAGAAAAGTGGCATTAT CTAAGTCAAAGCAGATTAATAACATCTCCCGCAGAATTACTATCTAAGGCCGGAAAAAAGCATACCGAATATATAGACAA CTGGGACTTTTCTAAAACCGTCGAGACTTGGGAAAATGTTTTTGGTGAAGGTTCTGTCAAGATACTACTCTACGAAGACC TGGCTTACGACTCTCAAAAGTTTTATAAAGAACTATCAAAAATAATTGATTGTGACGAAAAAAGCATAAACGAATCATTA AAAGGAGGAAAAGAAGAAAGAAAAAGAAAACGTTACGACAAAGGATATCTTATCCAACAATCTATGTTTGATATCCTCAA TATGTACGTTCCCCACTTAAGTGAACCTTGCAAGAAAAGTCCTTCACCGGTTCTGATAGACTGCATAAATCGCATCATGA AAAGAATCAGAATAATGGACAAAAAAATACCATTTCTCGATAAAAGAGAAAAACAGGATATCAGAAAAATGTACTCCGAA AGTAACGCAGAACTCATAAAAAAAGGAGTATCAAAAGAGTGCTTGATTAAATATAATTATATATAA
Upstream 100 bases:
>100_bases ACGGGGCACGTCCCTCTGATTTGCACCGAACACAAGAAACACCGCAAATCATCAAACACACTACCCTCTTGAGAGGGTTA TACCAAAGAATAGTTATTCA
Downstream 100 bases:
>100_bases TAATCACCTCCGGATACATTTCATCAGCTTGACGTTTAAACCAAACAGATGGGCACCTCTATTCATTGTCGTGAGCAAGT TGAAGACAAGGCGGACGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTRLIVHIGYPKCASTTLQEIVFPSILGERHFGIARHNGRRKDQWRFLYNILFPDGNLSTLPPELRLTGCQKSDDISAKS VNDPLDWLNDGALSKMLTPGAVNVFSAEQFLFPYRSQFRHNGGERLKRLFDDGSVTFTVLIIIRNQADLVTSYVAEKWHY LSQSRLITSPAELLSKAGKKHTEYIDNWDFSKTVETWENVFGEGSVKILLYEDLAYDSQKFYKELSKIIDCDEKSINESL KGGKEERKRKRYDKGYLIQQSMFDILNMYVPHLSEPCKKSPSPVLIDCINRIMKRIRIMDKKIPFLDKREKQDIRKMYSE SNAELIKKGVSKECLIKYNYI
Sequences:
>Translated_341_residues MTRLIVHIGYPKCASTTLQEIVFPSILGERHFGIARHNGRRKDQWRFLYNILFPDGNLSTLPPELRLTGCQKSDDISAKS VNDPLDWLNDGALSKMLTPGAVNVFSAEQFLFPYRSQFRHNGGERLKRLFDDGSVTFTVLIIIRNQADLVTSYVAEKWHY LSQSRLITSPAELLSKAGKKHTEYIDNWDFSKTVETWENVFGEGSVKILLYEDLAYDSQKFYKELSKIIDCDEKSINESL KGGKEERKRKRYDKGYLIQQSMFDILNMYVPHLSEPCKKSPSPVLIDCINRIMKRIRIMDKKIPFLDKREKQDIRKMYSE SNAELIKKGVSKECLIKYNYI >Mature_340_residues TRLIVHIGYPKCASTTLQEIVFPSILGERHFGIARHNGRRKDQWRFLYNILFPDGNLSTLPPELRLTGCQKSDDISAKSV NDPLDWLNDGALSKMLTPGAVNVFSAEQFLFPYRSQFRHNGGERLKRLFDDGSVTFTVLIIIRNQADLVTSYVAEKWHYL SQSRLITSPAELLSKAGKKHTEYIDNWDFSKTVETWENVFGEGSVKILLYEDLAYDSQKFYKELSKIIDCDEKSINESLK GGKEERKRKRYDKGYLIQQSMFDILNMYVPHLSEPCKKSPSPVLIDCINRIMKRIRIMDKKIPFLDKREKQDIRKMYSES NAELIKKGVSKECLIKYNYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39600; Mature: 39469
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLIVHIGYPKCASTTLQEIVFPSILGERHFGIARHNGRRKDQWRFLYNILFPDGNLST CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHEEHHEECCCCCCCC LPPELRLTGCQKSDDISAKSVNDPLDWLNDGALSKMLTPGAVNVFSAEQFLFPYRSQFRH CCCCCEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC NGGERLKRLFDDGSVTFTVLIIIRNQADLVTSYVAEKWHYLSQSRLITSPAELLSKAGKK CHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH HTEYIDNWDFSKTVETWENVFGEGSVKILLYEDLAYDSQKFYKELSKIIDCDEKSINESL HHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH KGGKEERKRKRYDKGYLIQQSMFDILNMYVPHLSEPCKKSPSPVLIDCINRIMKRIRIMD CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHH KKIPFLDKREKQDIRKMYSESNAELIKKGVSKECLIKYNYI HCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCC >Mature Secondary Structure TRLIVHIGYPKCASTTLQEIVFPSILGERHFGIARHNGRRKDQWRFLYNILFPDGNLST CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHEEHHEECCCCCCCC LPPELRLTGCQKSDDISAKSVNDPLDWLNDGALSKMLTPGAVNVFSAEQFLFPYRSQFRH CCCCCEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC NGGERLKRLFDDGSVTFTVLIIIRNQADLVTSYVAEKWHYLSQSRLITSPAELLSKAGKK CHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH HTEYIDNWDFSKTVETWENVFGEGSVKILLYEDLAYDSQKFYKELSKIIDCDEKSINESL HHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHH KGGKEERKRKRYDKGYLIQQSMFDILNMYVPHLSEPCKKSPSPVLIDCINRIMKRIRIMD CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHH KKIPFLDKREKQDIRKMYSESNAELIKKGVSKECLIKYNYI HCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA