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The map label for this gene is perM [C]

Identifier: 194333691

GI number: 194333691

Start: 940234

End: 941442

Strand: Reverse

Name: perM [C]

Synonym: Paes_0858

Alternate gene names: 194333691

Gene position: 941442-940234 (Counterclockwise)

Preceding gene: 194333692

Following gene: 194333670

Centisome position: 37.46

GC content: 47.81

Gene sequence:

>1209_bases
ATGCATCAATCTGCAAGCAACCGCAACCTGCTGGTTGCCGTCATAACAGCCGGAGCCCTTTTTCTGGGATTTGAAGTCAG
GGATGCGCTTTCCCCGCTTCTGGTTTACCTGATCCTGGTATTCCTTATTCAGCCCCTGCGCGACAATCAGTTTGTTGAAC
GGTTGTTCTGGGGGTTGAACATCCTTTTCGGGATATGGCTTTTTTCCGAGCTTTCAGGACTCCTGACGCCGTTCATTATT
GCTTTGGTGCTTGCATTTCTCTTCGAGCCACTGATGAACGGCCTGCTCAGACTGAACATGCCTCGCCTGCTTTCGGCTTT
TCTCATAACCGTTTTCGGTGTAGGCGGTATCGTGCTGATGGTAGCGCTGCTCTCCCCTGAAATCGGCAGACAGATGACCG
CATTCGGCTCAATCGTTCCGCTTATCCCGGATTACCTGCAGGCATTTATCAACTGGATATTCAGCTTTGAGATTTTTACG
TGGTTTTCGATTGATGTCGATGCGGTCAAACAACATATCATCCAGTCGATCAACGAACAGCTTGACAACATAGGAATGCT
GGCAAGCAATTTCACGCAGACCCTCTGGAAAAGCATTCCCAAGGTGATCACAACCATTACGACAATCATTCTGCTGCCAT
TTCTGACATTCTGGTTTCTCAACGATTTCAACCGTTTTTCAGATGCGATGGCCAGAATGCTGAATAAAAAGCCGGCATTG
TCGATACGGCGATATGTTCCTATGGCCAAAGATATTCTCAATCAGTATATCCGCGGGCAGCTTATTGTCATGATCATCGA
GATAACGCTTTACTCCACTTTTTTTTCAATTATCGGCATCAACTACTCGCTCCTGCTCGGCATTCTTTCCGGGGCGGCTC
TCTGGCTCCCCTACATCGGCATCTCGACGGCTATCGCTCTGACCTCACTGGTCATCTCTCTTGGAAGCAACCCTATGGAG
CAGTTTGTATGGGCAGGTCTGACCTACCTCTCAATCCAGGCGCTTGAAATTCTTTTCATGGTACCCAAAATCGTAGGTGG
CAAGGTTCAGCTTAACCCGATCATCCTTTTCCTCTCCATTTTCACCTTTGGCTACTTTTTCGGTATAGGAGGTATCCTGA
TTTCTATTCCCGTGTCTGCATTCATTATTGCCCTTGTCAGGGAAAAACTCTACCAGGAAAAGAGCGAACGTCTTGATAAC
CCTGCTTAA

Upstream 100 bases:

>100_bases
ATCGGCAATGTCCGGCGAATTCATCTCTTCGCCATCCACAAGAAGCGAATTCCTTCGCCTTATTCACAACAGATCATAAC
GTTTTACCAGGCCTTTGGTC

Downstream 100 bases:

>100_bases
TCATCGCCGACCCACTCCCTGAGCTGCCCACAGCCGGATTCAACGGCATCGCACATCATCGATTCAATTTCAGGACTGAG
AGAATGACCCATTTCAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MHQSASNRNLLVAVITAGALFLGFEVRDALSPLLVYLILVFLIQPLRDNQFVERLFWGLNILFGIWLFSELSGLLTPFII
ALVLAFLFEPLMNGLLRLNMPRLLSAFLITVFGVGGIVLMVALLSPEIGRQMTAFGSIVPLIPDYLQAFINWIFSFEIFT
WFSIDVDAVKQHIIQSINEQLDNIGMLASNFTQTLWKSIPKVITTITTIILLPFLTFWFLNDFNRFSDAMARMLNKKPAL
SIRRYVPMAKDILNQYIRGQLIVMIIEITLYSTFFSIIGINYSLLLGILSGAALWLPYIGISTAIALTSLVISLGSNPME
QFVWAGLTYLSIQALEILFMVPKIVGGKVQLNPIILFLSIFTFGYFFGIGGILISIPVSAFIIALVREKLYQEKSERLDN
PA

Sequences:

>Translated_402_residues
MHQSASNRNLLVAVITAGALFLGFEVRDALSPLLVYLILVFLIQPLRDNQFVERLFWGLNILFGIWLFSELSGLLTPFII
ALVLAFLFEPLMNGLLRLNMPRLLSAFLITVFGVGGIVLMVALLSPEIGRQMTAFGSIVPLIPDYLQAFINWIFSFEIFT
WFSIDVDAVKQHIIQSINEQLDNIGMLASNFTQTLWKSIPKVITTITTIILLPFLTFWFLNDFNRFSDAMARMLNKKPAL
SIRRYVPMAKDILNQYIRGQLIVMIIEITLYSTFFSIIGINYSLLLGILSGAALWLPYIGISTAIALTSLVISLGSNPME
QFVWAGLTYLSIQALEILFMVPKIVGGKVQLNPIILFLSIFTFGYFFGIGGILISIPVSAFIIALVREKLYQEKSERLDN
PA
>Mature_402_residues
MHQSASNRNLLVAVITAGALFLGFEVRDALSPLLVYLILVFLIQPLRDNQFVERLFWGLNILFGIWLFSELSGLLTPFII
ALVLAFLFEPLMNGLLRLNMPRLLSAFLITVFGVGGIVLMVALLSPEIGRQMTAFGSIVPLIPDYLQAFINWIFSFEIFT
WFSIDVDAVKQHIIQSINEQLDNIGMLASNFTQTLWKSIPKVITTITTIILLPFLTFWFLNDFNRFSDAMARMLNKKPAL
SIRRYVPMAKDILNQYIRGQLIVMIIEITLYSTFFSIIGINYSLLLGILSGAALWLPYIGISTAIALTSLVISLGSNPME
QFVWAGLTYLSIQALEILFMVPKIVGGKVQLNPIILFLSIFTFGYFFGIGGILISIPVSAFIIALVREKLYQEKSERLDN
PA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=328, Percent_Identity=27.7439024390244, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 45166; Mature: 45166

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]