| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214432
Identifier: 193214432
GI number: 193214432
Start: 840814
End: 841743
Strand: Direct
Name: 193214432
Synonym: Ctha_0715
Alternate gene names: NA
Gene position: 840814-841743 (Clockwise)
Preceding gene: 193214429
Following gene: 193214433
Centisome position: 25.53
GC content: 46.56
Gene sequence:
>930_bases ATGCTATCACCTGAAGGAAAAAATGTCCAGACTGATATTTGGAAAGGCATGATGTATGTGGCGGGCGCGGCCATTTTGTG GAGTACGGGCGGCGTGCTGATTAAATCCATTTCGTTAAATGCCTGCCAAATCTCTTTTTGGCGCGCCATGTTTGCCACCT TTACGATTTTCGCAATCGTAAAGCCCAAACAGATATCTTCCGATATAACCACGTTATTTGCCGCCGTTGCGTATGCAGCT ACGCTTATTCTTTTTGTTGTTGCCACCAAACTAACCACCGCCGCAAACGCCATTTTGCTGCAATACACAGCCCCGATTTA TGTTGGACTTTTTGGCTGGCTCTTTTTGAAAGAGCGAGTCAGCTTTTCTCATATCGTCACAATGGGGATTGGTTTTATCG GAATGGCTATTTTTTTCGTGGATGGCCTTTCCACCGAAAACCATCTGGGAAATTTAGCGGCCATTTTTTCTGGCTTAGGT TTTGGCGTTTTTCTTGTTCTGCTGCGCAAAAAAAGCGACGACAACCCAATCGACTCCGTGCTGATTGGCAACGGACTGAT TATGATTTTTTGCGCCTCAGCTATGATGTTCAGCGCCGCGCAAGACCCGAGAGGCATAGACCACACAGATGTGCTCTACG GCTTCGCCATTAGCACAGCCGATAGCGTTATGGTGGCATTTCTCGGCATTTTGCAAATTGGAATTCCATACGTCATTTTT AGTCGTGGCATTGCTGCCATTCCGGCGTTGGACGCCTCATTATTATCCATGTTAGAGCCGGTGCTCAATCCAATTTGGGT GCTTTTGTTTGTCGGCGAAATTCCTTCTTTCAACGCCATCATTGGCGGCGCGATCCTTTTAGCCGCAGTTGCGTTTCAAA GTTATCGGACGGGACAGTTCTTCAAATCTCAAGAAATCAAAGGGAATTAA
Upstream 100 bases:
>100_bases GAAAACAGCTTGCATTGCTAATAAAATCTTTATGCTTGGCCTTGCGCAAAATCATTTTTTTTTGCGATAATAAGGCTTTC AAAATGCCACCAAAAAACGA
Downstream 100 bases:
>100_bases TTTTTTATCCCTCATAAAAAAATCCGATAAAATCAATCCGATTTTGAATCTAATCAATTCCCGCATCCGTTAGCAAGGAA TAGACTTTATGCTGAAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLSPEGKNVQTDIWKGMMYVAGAAILWSTGGVLIKSISLNACQISFWRAMFATFTIFAIVKPKQISSDITTLFAAVAYAA TLILFVVATKLTTAANAILLQYTAPIYVGLFGWLFLKERVSFSHIVTMGIGFIGMAIFFVDGLSTENHLGNLAAIFSGLG FGVFLVLLRKKSDDNPIDSVLIGNGLIMIFCASAMMFSAAQDPRGIDHTDVLYGFAISTADSVMVAFLGILQIGIPYVIF SRGIAAIPALDASLLSMLEPVLNPIWVLLFVGEIPSFNAIIGGAILLAAVAFQSYRTGQFFKSQEIKGN
Sequences:
>Translated_309_residues MLSPEGKNVQTDIWKGMMYVAGAAILWSTGGVLIKSISLNACQISFWRAMFATFTIFAIVKPKQISSDITTLFAAVAYAA TLILFVVATKLTTAANAILLQYTAPIYVGLFGWLFLKERVSFSHIVTMGIGFIGMAIFFVDGLSTENHLGNLAAIFSGLG FGVFLVLLRKKSDDNPIDSVLIGNGLIMIFCASAMMFSAAQDPRGIDHTDVLYGFAISTADSVMVAFLGILQIGIPYVIF SRGIAAIPALDASLLSMLEPVLNPIWVLLFVGEIPSFNAIIGGAILLAAVAFQSYRTGQFFKSQEIKGN >Mature_309_residues MLSPEGKNVQTDIWKGMMYVAGAAILWSTGGVLIKSISLNACQISFWRAMFATFTIFAIVKPKQISSDITTLFAAVAYAA TLILFVVATKLTTAANAILLQYTAPIYVGLFGWLFLKERVSFSHIVTMGIGFIGMAIFFVDGLSTENHLGNLAAIFSGLG FGVFLVLLRKKSDDNPIDSVLIGNGLIMIFCASAMMFSAAQDPRGIDHTDVLYGFAISTADSVMVAFLGILQIGIPYVIF SRGIAAIPALDASLLSMLEPVLNPIWVLLFVGEIPSFNAIIGGAILLAAVAFQSYRTGQFFKSQEIKGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33194; Mature: 33194
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPEGKNVQTDIWKGMMYVAGAAILWSTGGVLIKSISLNACQISFWRAMFATFTIFAIV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEE KPKQISSDITTLFAAVAYAATLILFVVATKLTTAANAILLQYTAPIYVGLFGWLFLKERV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH SFSHIVTMGIGFIGMAIFFVDGLSTENHLGNLAAIFSGLGFGVFLVLLRKKSDDNPIDSV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LIGNGLIMIFCASAMMFSAAQDPRGIDHTDVLYGFAISTADSVMVAFLGILQIGIPYVIF HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SRGIAAIPALDASLLSMLEPVLNPIWVLLFVGEIPSFNAIIGGAILLAAVAFQSYRTGQF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCH FKSQEIKGN HCCCCCCCC >Mature Secondary Structure MLSPEGKNVQTDIWKGMMYVAGAAILWSTGGVLIKSISLNACQISFWRAMFATFTIFAIV CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEE KPKQISSDITTLFAAVAYAATLILFVVATKLTTAANAILLQYTAPIYVGLFGWLFLKERV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHH SFSHIVTMGIGFIGMAIFFVDGLSTENHLGNLAAIFSGLGFGVFLVLLRKKSDDNPIDSV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH LIGNGLIMIFCASAMMFSAAQDPRGIDHTDVLYGFAISTADSVMVAFLGILQIGIPYVIF HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SRGIAAIPALDASLLSMLEPVLNPIWVLLFVGEIPSFNAIIGGAILLAAVAFQSYRTGQF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCH FKSQEIKGN HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA