| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is mtnA [H]
Identifier: 193214358
GI number: 193214358
Start: 751394
End: 752494
Strand: Direct
Name: mtnA [H]
Synonym: Ctha_0640
Alternate gene names: 193214358
Gene position: 751394-752494 (Clockwise)
Preceding gene: 193214349
Following gene: 193214359
Centisome position: 22.81
GC content: 47.05
Gene sequence:
>1101_bases ATGATTGACGCAATATCCTTCGGAAATAACAAGCTGAGATATCTCGATCAGAGATTTCTTCCATTACAAGAAAATTATGT AGAAACCGCTGACTACTTACAGGCGATTGAAGCCATTAAAACGCTCGCCGTGCGCGGTGCACCGCTGATCGGTGTTGCTG CTGGCTACACGGTTGTTTTGGCAGTGCAATGCTTCGATGGCGAAAAAGATAGCTTCAAAGCGTACTTCGATAAAATTATT GCTGAAGTTGAAGCCTCAAGACCGACTGCGGTGAACTTGTTTTTTGCAACCGCAAAAATGAACGAAGTTGTTGCCAAACG CTTTGCGGAATCCAGCATGGCCGAGCTCAAAGAGCACATTCTGAACGAAGCGATTTGCATCCACAACGAGGAAATCGCAA ACTGCGAAAATATGGCTCGTCATGGCGTGGCACTTATCCAAAAAGATCTTGGCCACATTTTGGAAAAGCGCAAGCTAAAT GTTTTAACCCACTGCAACACGGGCACGCTTGCCACTGGCGGACTTGGCACCGCACTTGGCGTTATCAAACAAGCTTACAA AGACGGCCTAATTGAAAAAGTTTATACTTCTGAAAGTCGCCCACTTTTGCAAGGCCTTCGCCTAACGGCTTGGGAACTTG AAAAAGAAGGCATACCATTCTTTTCACATGCCGATTCATCTTCTGGCATTTTGATGCAGCGCGGCATGGTCGATTTTGGC ATTGTTGGCGCTGATCGCATCGCAGCCAATGGCGACACGGCAAACAAAATCGGAACATTCAACCACGCCGTGCTTTGCCA CGAGCATGGATTGCCGTTCTATATCGCTGCTCCGATTTCTACCGTTGATATTACCATTCCTGATGGCACTTATATTCCAA TTGAAGAAAGAAACGCCGATGAACTTCGCGCGATTCATGGAACCAAAGTTGCCACAGACACCACGCCAGTTGTGAATTTC GCGTTCGACATGACACCAGCCAAATACATCAATGGCATTATTACCGATAAAGCCGCACTGACTGGCGACTATGTCAAAGC GCTAAAAGAAGTTGTTCCAGCCGCTGCAGCTTCCGACAAAGGCCTTTCCAGCGTTTGCTAA
Upstream 100 bases:
>100_bases GGTTTTTCGCCCTCATGTTGCTTTTGTAAATTCCTCCCCGACTTTCAGTTTAAGTCTCAGTTACCAAATTTTTTAACGGC TTTGAAACAAAAAACCGATA
Downstream 100 bases:
>100_bases TTCCATAGCCGATTCTCATTTTTTTGAAGCACAATCGACATAGGGCGAGAAATGTTCTCGCCCTATTTTTTTACTTGCAA GACGTGCAAGTTCCTCAATC
Product: translation initiation factor, aIF-2BI family
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MIDAISFGNNKLRYLDQRFLPLQENYVETADYLQAIEAIKTLAVRGAPLIGVAAGYTVVLAVQCFDGEKDSFKAYFDKII AEVEASRPTAVNLFFATAKMNEVVAKRFAESSMAELKEHILNEAICIHNEEIANCENMARHGVALIQKDLGHILEKRKLN VLTHCNTGTLATGGLGTALGVIKQAYKDGLIEKVYTSESRPLLQGLRLTAWELEKEGIPFFSHADSSSGILMQRGMVDFG IVGADRIAANGDTANKIGTFNHAVLCHEHGLPFYIAAPISTVDITIPDGTYIPIEERNADELRAIHGTKVATDTTPVVNF AFDMTPAKYINGIITDKAALTGDYVKALKEVVPAAAASDKGLSSVC
Sequences:
>Translated_366_residues MIDAISFGNNKLRYLDQRFLPLQENYVETADYLQAIEAIKTLAVRGAPLIGVAAGYTVVLAVQCFDGEKDSFKAYFDKII AEVEASRPTAVNLFFATAKMNEVVAKRFAESSMAELKEHILNEAICIHNEEIANCENMARHGVALIQKDLGHILEKRKLN VLTHCNTGTLATGGLGTALGVIKQAYKDGLIEKVYTSESRPLLQGLRLTAWELEKEGIPFFSHADSSSGILMQRGMVDFG IVGADRIAANGDTANKIGTFNHAVLCHEHGLPFYIAAPISTVDITIPDGTYIPIEERNADELRAIHGTKVATDTTPVVNF AFDMTPAKYINGIITDKAALTGDYVKALKEVVPAAAASDKGLSSVC >Mature_366_residues MIDAISFGNNKLRYLDQRFLPLQENYVETADYLQAIEAIKTLAVRGAPLIGVAAGYTVVLAVQCFDGEKDSFKAYFDKII AEVEASRPTAVNLFFATAKMNEVVAKRFAESSMAELKEHILNEAICIHNEEIANCENMARHGVALIQKDLGHILEKRKLN VLTHCNTGTLATGGLGTALGVIKQAYKDGLIEKVYTSESRPLLQGLRLTAWELEKEGIPFFSHADSSSGILMQRGMVDFG IVGADRIAANGDTANKIGTFNHAVLCHEHGLPFYIAAPISTVDITIPDGTYIPIEERNADELRAIHGTKVATDTTPVVNF AFDMTPAKYINGIITDKAALTGDYVKALKEVVPAAAASDKGLSSVC
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=345, Percent_Identity=38.5507246376812, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI23943880, Length=338, Percent_Identity=34.3195266272189, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17557462, Length=340, Percent_Identity=35.8823529411765, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6325375, Length=391, Percent_Identity=32.2250639386189, Blast_Score=176, Evalue=5e-45, Organism=Drosophila melanogaster, GI21357667, Length=344, Percent_Identity=35.4651162790698, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24651647, Length=344, Percent_Identity=35.4651162790698, Blast_Score=207, Evalue=1e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 39663; Mature: 39663
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAISFGNNKLRYLDQRFLPLQENYVETADYLQAIEAIKTLAVRGAPLIGVAAGYTVVL CCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEE AVQCFDGEKDSFKAYFDKIIAEVEASRPTAVNLFFATAKMNEVVAKRFAESSMAELKEHI EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH LNEAICIHNEEIANCENMARHGVALIQKDLGHILEKRKLNVLTHCNTGTLATGGLGTALG HHHHHEECCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCHHHHHH VIKQAYKDGLIEKVYTSESRPLLQGLRLTAWELEKEGIPFFSHADSSSGILMQRGMVDFG HHHHHHHHHHHHHHHCCCCCHHHHCCHHHEEEHHHCCCCEEECCCCCCCEEEECCCCCEE IVGADRIAANGDTANKIGTFNHAVLCHEHGLPFYIAAPISTVDITIPDGTYIPIEERNAD ECCCCCEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCEEECCCCCHH ELRAIHGTKVATDTTPVVNFAFDMTPAKYINGIITDKAALTGDYVKALKEVVPAAAASDK HHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC GLSSVC CCCCCC >Mature Secondary Structure MIDAISFGNNKLRYLDQRFLPLQENYVETADYLQAIEAIKTLAVRGAPLIGVAAGYTVVL CCCCEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEE AVQCFDGEKDSFKAYFDKIIAEVEASRPTAVNLFFATAKMNEVVAKRFAESSMAELKEHI EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH LNEAICIHNEEIANCENMARHGVALIQKDLGHILEKRKLNVLTHCNTGTLATGGLGTALG HHHHHEECCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEECCCHHHHHH VIKQAYKDGLIEKVYTSESRPLLQGLRLTAWELEKEGIPFFSHADSSSGILMQRGMVDFG HHHHHHHHHHHHHHHCCCCCHHHHCCHHHEEEHHHCCCCEEECCCCCCCEEEECCCCCEE IVGADRIAANGDTANKIGTFNHAVLCHEHGLPFYIAAPISTVDITIPDGTYIPIEERNAD ECCCCCEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEEECCCCCEEECCCCCHH ELRAIHGTKVATDTTPVVNFAFDMTPAKYINGIITDKAALTGDYVKALKEVVPAAAASDK HHHHHCCCEEECCCCCEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC GLSSVC CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]