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The map label for this gene is smf [H]

Identifier: 193214336

GI number: 193214336

Start: 728207

End: 729367

Strand: Direct

Name: smf [H]

Synonym: Ctha_0618

Alternate gene names: 193214336

Gene position: 728207-729367 (Clockwise)

Preceding gene: 193214335

Following gene: 193214337

Centisome position: 22.11

GC content: 51.42

Gene sequence:

>1161_bases
ATGATGGCATCCCCCAATGCTTCCGATTTCGGAAAGCATCTTTCGTTTCTGATCCTTTCCCAAATTCCATCCATTGGCTC
GCACCGGCTGCGAAGCCTTCTTGCCGAGTTTTCATCGCATCGAGAAGTTTTTTCCGCATCGCCGGAGCGCATCCGGCAAC
TGGCTGGATTTAGCGAAAAGCTTGGTGCGGAGATTTGCGCATTTGGCCAAAACAAAGAGAAAATGGCGCTGGCTGAAGCA
CAGGCCTACCGGCAATTCGAACTCATGGAAAAATACCATGCACGCCTCATGGCCATCAGCGACGCCGATTACCCGGCGCT
GCTCAAACAAATCTATACGCCGCCGGCTTATCTTTTTGTGCGCGGCTCGCTAACGCCCGAAGATAGCCGCAGTCTTGCGG
TTGTGGGCACGCGACAAGCTACCGACTACGGCAAAAAAGCAACGCGAAAACTTTGCCAAGGCCTGGTAGCAAACAGGATG
ACGATCGTCAGCGGCCTTGCCTACGGCATCGACATGACAGCTCACCAAGCGGCGCTCGAAGCTGGCGGACGCACGCTCGC
GGTGCTTGCTTGCGGCGTCGATAATATTTACACTGATCCAAAAGGGAAAATCTATCCGGCCATTATTGAAAACGGCGCGC
TGCTTTCCGAAGAATGGCTGGGAAGCGAGATTACAGCGGAAAAATTTCCCAAGCGCAATCGCATTATTTCAGGTCTTTCG
CTCGGCACGCTGGTTGTGGAATCAGATTATAAAGGCGGCGCGCTCATTACAGCGGCCTACGCGCTTGACCAAAACCGCGA
AGTTTTTGCCGTTCCAGGCAATATTTTCGCCAAAAAAGCGAATGGCACAAACAGTCTCATTCGCGACGCCAAAGCAAAAT
TGGTGCTTTCGGCTGAAGATATTTTAAACGAACTGCAGCCGCACACCTCACAAATCAACTTGTTTGAAGAAAATGGCCAT
CGCCCGTTGCCGCCACAAGAATCGCTGAGCCAGGAAGAATCGGATATTTTGGCGCTCATCAATGCCTCCCCGATTCAAAT
CGATGAGCTTGTGGAAAAATCAGGCATGGCGGTTTCGGATTTGCAATGCACACTTTTCGAGCTTGAACTCAAGCATCAAG
TAGAGCAGCTTCCTGGAAAGTTTTTCAAACGCATCGCGTAA

Upstream 100 bases:

>100_bases
TTTTTGCGCTAAAAATCTTGCGCTGAACAGCCTTGCCCTTTTCGGAAAAACGTACCCTTTTCATAGAAAACATTTCATCA
ATTTTTTTACCGAACCCAAT

Downstream 100 bases:

>100_bases
GTGACGAATGCTTTCCGGCACCACGCTCGCTGTTTTTTTTCAACGCGTTGAAAGCCGCTGTTGCTTTATTTCGGGAGTTG
ATTCACGCGATGTGGTTTTC

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MMASPNASDFGKHLSFLILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEKLGAEICAFGQNKEKMALAEA
QAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFVRGSLTPEDSRSLAVVGTRQATDYGKKATRKLCQGLVANRM
TIVSGLAYGIDMTAHQAALEAGGRTLAVLACGVDNIYTDPKGKIYPAIIENGALLSEEWLGSEITAEKFPKRNRIISGLS
LGTLVVESDYKGGALITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAEDILNELQPHTSQINLFEENGH
RPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSDLQCTLFELELKHQVEQLPGKFFKRIA

Sequences:

>Translated_386_residues
MMASPNASDFGKHLSFLILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEKLGAEICAFGQNKEKMALAEA
QAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFVRGSLTPEDSRSLAVVGTRQATDYGKKATRKLCQGLVANRM
TIVSGLAYGIDMTAHQAALEAGGRTLAVLACGVDNIYTDPKGKIYPAIIENGALLSEEWLGSEITAEKFPKRNRIISGLS
LGTLVVESDYKGGALITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAEDILNELQPHTSQINLFEENGH
RPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSDLQCTLFELELKHQVEQLPGKFFKRIA
>Mature_386_residues
MMASPNASDFGKHLSFLILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEKLGAEICAFGQNKEKMALAEA
QAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFVRGSLTPEDSRSLAVVGTRQATDYGKKATRKLCQGLVANRM
TIVSGLAYGIDMTAHQAALEAGGRTLAVLACGVDNIYTDPKGKIYPAIIENGALLSEEWLGSEITAEKFPKRNRIISGLS
LGTLVVESDYKGGALITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAEDILNELQPHTSQINLFEENGH
RPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSDLQCTLFELELKHQVEQLPGKFFKRIA

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=319, Percent_Identity=35.7366771159875, Blast_Score=167, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 42269; Mature: 42269

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMASPNASDFGKHLSFLILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEK
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHH
LGAEICAFGQNKEKMALAEAQAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFV
HCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCEEEEE
RGSLTPEDSRSLAVVGTRQATDYGKKATRKLCQGLVANRMTIVSGLAYGIDMTAHQAALE
ECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGGRTLAVLACGVDNIYTDPKGKIYPAIIENGALLSEEWLGSEITAEKFPKRNRIISGLS
CCCCEEEEEEECCCCCCCCCCCCEEHHHHCCCCEECHHHCCCCCCHHHCCCHHHEECCCC
LGTLVVESDYKGGALITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAED
CCEEEEECCCCCCEEEEEEEEECCCCEEEEECCCEEEECCCCHHHHHHHHHHHEEEEHHH
ILNELQPHTSQINLFEENGHRPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSD
HHHHCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCEEHH
LQCTLFELELKHQVEQLPGKFFKRIA
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMASPNASDFGKHLSFLILSQIPSIGSHRLRSLLAEFSSHREVFSASPERIRQLAGFSEK
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHH
LGAEICAFGQNKEKMALAEAQAYRQFELMEKYHARLMAISDADYPALLKQIYTPPAYLFV
HCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCEEEEE
RGSLTPEDSRSLAVVGTRQATDYGKKATRKLCQGLVANRMTIVSGLAYGIDMTAHQAALE
ECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGGRTLAVLACGVDNIYTDPKGKIYPAIIENGALLSEEWLGSEITAEKFPKRNRIISGLS
CCCCEEEEEEECCCCCCCCCCCCEEHHHHCCCCEECHHHCCCCCCHHHCCCHHHEECCCC
LGTLVVESDYKGGALITAAYALDQNREVFAVPGNIFAKKANGTNSLIRDAKAKLVLSAED
CCEEEEECCCCCCEEEEEEEEECCCCEEEEECCCEEEECCCCHHHHHHHHHHHEEEEHHH
ILNELQPHTSQINLFEENGHRPLPPQESLSQEESDILALINASPIQIDELVEKSGMAVSD
HHHHCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCEEHH
LQCTLFELELKHQVEQLPGKFFKRIA
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]