| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214081
Identifier: 193214081
GI number: 193214081
Start: 417842
End: 419023
Strand: Direct
Name: 193214081
Synonym: Ctha_0362
Alternate gene names: NA
Gene position: 417842-419023 (Clockwise)
Preceding gene: 193214080
Following gene: 193214082
Centisome position: 12.69
GC content: 42.47
Gene sequence:
>1182_bases ATGGCTACTTCGAAAGAAAGCATTGAAAAAATTCAGAACGCTGTTCTCCAAACAGAAAAATATATTCTCGCCGAACAGTA TCGCGGCTACGATCCTTACGATGCGCTGGGCTCACCAATATTTGATCTGCCGGTTTTGCAAACCAATAAAATTCTAAGAT TAGGAGCGCAACAAGTTTTAAAACGCCTGCCGATCAACCTTCGCCCACAACTTCATATTCAGAAAGGATATAACCCAGTT ACTTTGGGCTTGTGCCTTTACGCTTATTCTTATTTAGCCAAAGTTTTTCCCAAAAAGGAAAGCGATTATTTAAAGCACAT TACATTTTGTATTAACGAGTTAGAAAAATTTCGGTCAAAAGGTTATAGCGGCGCATGCTGGGGCTACGATTTTGATTGGG AAGCACGATACGCCAAAATACCAGCTTACACACCAACCATTGTTGCCACCGGATTTATTACCAACGCGCTATTTACGGCA TATAATTTGCACAAAATCCAGAAAGCGGTTGATTTATGTATCAGCGCTTGTGATTTTTTAAAATCTGATTTGAATCGTAC CGAGTTTGAAGACGGCTCATTTTGCTGGTCTTACTCGCCACTCGACAGGCAAGTTGTCTTGAACGCCACCATGAAAGGCG CCAGGCTTTGCGCGCAAGTAGCCTGTGAAACCAAAGACCAAACGCTTATTGAGTTGGCTGAAAAAACCGTGCGATTCGTG GTAAAGAAGCAACGCGCGAATGGCTCATGGCCTTACTCGATTGGCGATACGCGAACTTGGGCGGACAATTTTCATACTGG TTATGTTTTGGACGCGCTGGATTCCTATCAAATTGTGAGTGGCGATGAGCTGGTTCAGGAAGCCAAGCATTTAGGTTGGA AATATTATCGTAATAGTTTTTTTATCGATGATCAAATCCCAAAATATTACGATAACCAACTCTATCCGATAGATGCAACG GCTGTGGCGCAATCGATCTTAACGCTTGTGCGATTTGGCGATGTTGAAACAGCCAATACCGTTGCGCTTTGGTCGATTGA CAACCTGATGAATAGCGACGGCAGCTTCATTTATCAAAAGCATAAGTTCTATCGAAATTCGGTAGTTTACATGAGGTGGT CGGTAGCTTGGATGTTTTGTGCCCTCAGTGAACTTCTTTATTTTTGTTACCAGAAAGGTTAA
Upstream 100 bases:
>100_bases GCACTTTGGGGCGCTTTTGGCGTGGCAAATTGGATTAACCAAAATGAACCTGCTTAGCTTGATTTTTTTCAAAGCTTTTC ACGTAATTGATTAAAAAAAC
Downstream 100 bases:
>100_bases ACCATGCGTATTTGGGTTGATATTGACAATTCGCCGCATGTGCCCTTTTTTTCACCAATTCTAAAGGAATTGAAACAGAG AGGGCATGAAGTAATAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MATSKESIEKIQNAVLQTEKYILAEQYRGYDPYDALGSPIFDLPVLQTNKILRLGAQQVLKRLPINLRPQLHIQKGYNPV TLGLCLYAYSYLAKVFPKKESDYLKHITFCINELEKFRSKGYSGACWGYDFDWEARYAKIPAYTPTIVATGFITNALFTA YNLHKIQKAVDLCISACDFLKSDLNRTEFEDGSFCWSYSPLDRQVVLNATMKGARLCAQVACETKDQTLIELAEKTVRFV VKKQRANGSWPYSIGDTRTWADNFHTGYVLDALDSYQIVSGDELVQEAKHLGWKYYRNSFFIDDQIPKYYDNQLYPIDAT AVAQSILTLVRFGDVETANTVALWSIDNLMNSDGSFIYQKHKFYRNSVVYMRWSVAWMFCALSELLYFCYQKG
Sequences:
>Translated_393_residues MATSKESIEKIQNAVLQTEKYILAEQYRGYDPYDALGSPIFDLPVLQTNKILRLGAQQVLKRLPINLRPQLHIQKGYNPV TLGLCLYAYSYLAKVFPKKESDYLKHITFCINELEKFRSKGYSGACWGYDFDWEARYAKIPAYTPTIVATGFITNALFTA YNLHKIQKAVDLCISACDFLKSDLNRTEFEDGSFCWSYSPLDRQVVLNATMKGARLCAQVACETKDQTLIELAEKTVRFV VKKQRANGSWPYSIGDTRTWADNFHTGYVLDALDSYQIVSGDELVQEAKHLGWKYYRNSFFIDDQIPKYYDNQLYPIDAT AVAQSILTLVRFGDVETANTVALWSIDNLMNSDGSFIYQKHKFYRNSVVYMRWSVAWMFCALSELLYFCYQKG >Mature_392_residues ATSKESIEKIQNAVLQTEKYILAEQYRGYDPYDALGSPIFDLPVLQTNKILRLGAQQVLKRLPINLRPQLHIQKGYNPVT LGLCLYAYSYLAKVFPKKESDYLKHITFCINELEKFRSKGYSGACWGYDFDWEARYAKIPAYTPTIVATGFITNALFTAY NLHKIQKAVDLCISACDFLKSDLNRTEFEDGSFCWSYSPLDRQVVLNATMKGARLCAQVACETKDQTLIELAEKTVRFVV KKQRANGSWPYSIGDTRTWADNFHTGYVLDALDSYQIVSGDELVQEAKHLGWKYYRNSFFIDDQIPKYYDNQLYPIDATA VAQSILTLVRFGDVETANTVALWSIDNLMNSDGSFIYQKHKFYRNSVVYMRWSVAWMFCALSELLYFCYQKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45220; Mature: 45089
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSKESIEKIQNAVLQTEKYILAEQYRGYDPYDALGSPIFDLPVLQTNKILRLGAQQVL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH KRLPINLRPQLHIQKGYNPVTLGLCLYAYSYLAKVFPKKESDYLKHITFCINELEKFRSK HHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GYSGACWGYDFDWEARYAKIPAYTPTIVATGFITNALFTAYNLHKIQKAVDLCISACDFL CCCCEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSDLNRTEFEDGSFCWSYSPLDRQVVLNATMKGARLCAQVACETKDQTLIELAEKTVRFV HHHCCCCCCCCCCEEEECCCCCCHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VKKQRANGSWPYSIGDTRTWADNFHTGYVLDALDSYQIVSGDELVQEAKHLGWKYYRNSF HHHHCCCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCEEECHHHHHHHHHHCCHHHHCCCE FIDDQIPKYYDNQLYPIDATAVAQSILTLVRFGDVETANTVALWSIDNLMNSDGSFIYQK EECCCCCHHHCCEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCEEHHH HKFYRNSVVYMRWSVAWMFCALSELLYFCYQKG HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATSKESIEKIQNAVLQTEKYILAEQYRGYDPYDALGSPIFDLPVLQTNKILRLGAQQVL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHH KRLPINLRPQLHIQKGYNPVTLGLCLYAYSYLAKVFPKKESDYLKHITFCINELEKFRSK HHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GYSGACWGYDFDWEARYAKIPAYTPTIVATGFITNALFTAYNLHKIQKAVDLCISACDFL CCCCEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSDLNRTEFEDGSFCWSYSPLDRQVVLNATMKGARLCAQVACETKDQTLIELAEKTVRFV HHHCCCCCCCCCCEEEECCCCCCHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VKKQRANGSWPYSIGDTRTWADNFHTGYVLDALDSYQIVSGDELVQEAKHLGWKYYRNSF HHHHCCCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCEEECHHHHHHHHHHCCHHHHCCCE FIDDQIPKYYDNQLYPIDATAVAQSILTLVRFGDVETANTVALWSIDNLMNSDGSFIYQK EECCCCCHHHCCEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCEEHHH HKFYRNSVVYMRWSVAWMFCALSELLYFCYQKG HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA