| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is asnB [H]
Identifier: 193214080
GI number: 193214080
Start: 415873
End: 417798
Strand: Direct
Name: asnB [H]
Synonym: Ctha_0361
Alternate gene names: 193214080
Gene position: 415873-417798 (Clockwise)
Preceding gene: 193214078
Following gene: 193214081
Centisome position: 12.63
GC content: 48.39
Gene sequence:
>1926_bases ATGTGTGGGATTGCCGGCATCATTACTGGTGGAAACCCGGAGATTTTGCAAAAAATGGTGGACATTCAGGCGCATCGCGG CCCTGACGACGCCGGCTTGCAATGGTTCGAATCTGCTAACGCCGGACTCGCACAACGCCGGCTTTCCATTTTAGATTTGA CGAACGCTGGGCATCAGCCCATGAAAAATGCTCGTGGGAACCGCTGGATTACCTTCAACGGCGAAATTTATAACTACCGC GAACTCCGCGCAGAACTGCAAACCAAAGGCTATCAGTTCAAATCCAATTCCGATACGGAAGTCATTTTAGCCGCCTACGA CGAATGGGGCGCTTCAGCTGTGAATCGTTTCAACGGCATGTTTGCTTTTGCGATTTACGACACCGATACACGCGAGCTTT TTTTAGCAAGAGATCATTTGGGCATCAAACCGCTTTATTACGCCCAACTTGGCGAAACGCTTCTTTTTGCCTCCGAAGCA AAAGCGCTTTTCGAATATCCGGCGATGAAAAAAGAAATCGAACCCGACGCGGTTGTGAGCGCAATCATGCTGCTTTGGGT GCCGGAGCCGAAAACGGGCTTCAAGAATGTCTTCAAACTGCCAGCCGGACATTACGCGATTTTTAAAAATGGCAAGCTTT CTATTCAGGAATATTGGGACATACCGATTCCTGAAACCACGCCAACCTTAACGCCTGCGTTGGAAGCCGAAAGCACAGCC AAACTGGTTGAATTGCTGGAGCAAACCATCGCGCGGCAAATGATTTCGGATGTGCCGGTAGGCGCGTTTTTGTCGGGCGG ACTGGATTCATCGCTTATTGTCGCGCTCATGCGCAAGGCGGCGCCCGGCGCGAAGCTTTCGACTTACACCATCGCCTTTA CTGAAGCCGATAAAAAAATGGAGGCCATGCCCGACGACGCTATGTATGCTCGGCGCGTCGCCAAAGAATTCGGCACGGAG CATCACGAGCTTTGCATCGAGCCGGATAGCAATAAGCATTTGCAAAAAATCCTCTGGCATTTGGACGATCCCGTCGCCGA TGGCGCGGCCATCAACACGTATTTGATTTCCAAACAAGCAAAAGACAACGGCACAACCGTGCTTCTGAATGGCATGGGCG GCGACGAAGTTTTTGGCGGCTATCGCAAACACTTTGCCTCATTAATGATTGAGCGTTATCAAAAAATCCCGACGCCGCTT CGCAAAGGCCTGATTGAACCGACAGTCAACGCCATGCCGGTGGCAATTGGCGGCAAGGGCATTATTCTAACGCGCTGGGC AAAACGCTTCCTTGGTAGCGCAAGCATATCACCATTAAACGCTTATATTTATGGATTTAATTATCATAAACCTGATGGCT TAAAACAAATTCTCGCCGAGCATTTGTTCCAAACGGATTTTGAAAATCTTTATCCAGTTCGCCGCTATTTTGAACTGGCA GAACGCGTCAAGCATTTGCCGCTTCTGCAAAAAATGACTTATCTCGATACGAAGCTTTTTTTAACCGGCATCAATCTGCT TTATTCCGACAAAGCGATGATGGCCGCTTCGGTGGAAGGTCGCCCGCCGCTGATTGATAAAGAAATTGTAGAATTTGCTG CTTATTTACCGTCGGAGCTAAAAATCAAAGGCCGCGAACAAAAATATCTCTTAAAGAAAGCTGCTGAATCCTACCTCCCT AACGACATCATTTATAGACCAAAAGCCCCTTTTGGCACGCCGCTTCGTGCATGGATGAAAACCGGTTTGAAATCGCAAAT GGAAACCTTATTTTCCAATAACGATTTTCCCCATAATCACTATCTCCAAAATGCTTACGTACTGAATTTGCTGGAAGCTC ATGCAAGCGGGAAAACCGACAACGCACACGCACTTTGGGGCGCTTTTGGCGTGGCAAATTGGATTAACCAAAATGAACCT GCTTAG
Upstream 100 bases:
>100_bases AAAGAGTTTAAAATACTTATATTCAACGGCAACAAAAAGCTGGAACAAGCGAGAAAATTTTCTTTTCAGAAACATTCATT TGTAGAAAGAGCGCGTTACT
Downstream 100 bases:
>100_bases CTTGATTTTTTTCAAAGCTTTTCACGTAATTGATTAAAAAAACATGGCTACTTCGAAAGAAAGCATTGAAAAAATTCAGA ACGCTGTTCTCCAAACAGAA
Product: asparagine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 641
Protein sequence:
>641_residues MCGIAGIITGGNPEILQKMVDIQAHRGPDDAGLQWFESANAGLAQRRLSILDLTNAGHQPMKNARGNRWITFNGEIYNYR ELRAELQTKGYQFKSNSDTEVILAAYDEWGASAVNRFNGMFAFAIYDTDTRELFLARDHLGIKPLYYAQLGETLLFASEA KALFEYPAMKKEIEPDAVVSAIMLLWVPEPKTGFKNVFKLPAGHYAIFKNGKLSIQEYWDIPIPETTPTLTPALEAESTA KLVELLEQTIARQMISDVPVGAFLSGGLDSSLIVALMRKAAPGAKLSTYTIAFTEADKKMEAMPDDAMYARRVAKEFGTE HHELCIEPDSNKHLQKILWHLDDPVADGAAINTYLISKQAKDNGTTVLLNGMGGDEVFGGYRKHFASLMIERYQKIPTPL RKGLIEPTVNAMPVAIGGKGIILTRWAKRFLGSASISPLNAYIYGFNYHKPDGLKQILAEHLFQTDFENLYPVRRYFELA ERVKHLPLLQKMTYLDTKLFLTGINLLYSDKAMMAASVEGRPPLIDKEIVEFAAYLPSELKIKGREQKYLLKKAAESYLP NDIIYRPKAPFGTPLRAWMKTGLKSQMETLFSNNDFPHNHYLQNAYVLNLLEAHASGKTDNAHALWGAFGVANWINQNEP A
Sequences:
>Translated_641_residues MCGIAGIITGGNPEILQKMVDIQAHRGPDDAGLQWFESANAGLAQRRLSILDLTNAGHQPMKNARGNRWITFNGEIYNYR ELRAELQTKGYQFKSNSDTEVILAAYDEWGASAVNRFNGMFAFAIYDTDTRELFLARDHLGIKPLYYAQLGETLLFASEA KALFEYPAMKKEIEPDAVVSAIMLLWVPEPKTGFKNVFKLPAGHYAIFKNGKLSIQEYWDIPIPETTPTLTPALEAESTA KLVELLEQTIARQMISDVPVGAFLSGGLDSSLIVALMRKAAPGAKLSTYTIAFTEADKKMEAMPDDAMYARRVAKEFGTE HHELCIEPDSNKHLQKILWHLDDPVADGAAINTYLISKQAKDNGTTVLLNGMGGDEVFGGYRKHFASLMIERYQKIPTPL RKGLIEPTVNAMPVAIGGKGIILTRWAKRFLGSASISPLNAYIYGFNYHKPDGLKQILAEHLFQTDFENLYPVRRYFELA ERVKHLPLLQKMTYLDTKLFLTGINLLYSDKAMMAASVEGRPPLIDKEIVEFAAYLPSELKIKGREQKYLLKKAAESYLP NDIIYRPKAPFGTPLRAWMKTGLKSQMETLFSNNDFPHNHYLQNAYVLNLLEAHASGKTDNAHALWGAFGVANWINQNEP A >Mature_641_residues MCGIAGIITGGNPEILQKMVDIQAHRGPDDAGLQWFESANAGLAQRRLSILDLTNAGHQPMKNARGNRWITFNGEIYNYR ELRAELQTKGYQFKSNSDTEVILAAYDEWGASAVNRFNGMFAFAIYDTDTRELFLARDHLGIKPLYYAQLGETLLFASEA KALFEYPAMKKEIEPDAVVSAIMLLWVPEPKTGFKNVFKLPAGHYAIFKNGKLSIQEYWDIPIPETTPTLTPALEAESTA KLVELLEQTIARQMISDVPVGAFLSGGLDSSLIVALMRKAAPGAKLSTYTIAFTEADKKMEAMPDDAMYARRVAKEFGTE HHELCIEPDSNKHLQKILWHLDDPVADGAAINTYLISKQAKDNGTTVLLNGMGGDEVFGGYRKHFASLMIERYQKIPTPL RKGLIEPTVNAMPVAIGGKGIILTRWAKRFLGSASISPLNAYIYGFNYHKPDGLKQILAEHLFQTDFENLYPVRRYFELA ERVKHLPLLQKMTYLDTKLFLTGINLLYSDKAMMAASVEGRPPLIDKEIVEFAAYLPSELKIKGREQKYLLKKAAESYLP NDIIYRPKAPFGTPLRAWMKTGLKSQMETLFSNNDFPHNHYLQNAYVLNLLEAHASGKTDNAHALWGAFGVANWINQNEP A
Specific function: Main asparagine synthetase in vegetative cells [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=407, Percent_Identity=28.5012285012285, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI168229252, Length=407, Percent_Identity=28.5012285012285, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI168229250, Length=407, Percent_Identity=28.5012285012285, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI296010848, Length=383, Percent_Identity=28.9817232375979, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI296010852, Length=314, Percent_Identity=28.9808917197452, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI296010850, Length=314, Percent_Identity=28.9808917197452, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI1786889, Length=407, Percent_Identity=34.1523341523341, Blast_Score=182, Evalue=6e-47, Organism=Caenorhabditis elegans, GI71993933, Length=409, Percent_Identity=28.8508557457213, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI25147557, Length=395, Percent_Identity=29.1139240506329, Blast_Score=155, Evalue=7e-38, Organism=Caenorhabditis elegans, GI25147560, Length=336, Percent_Identity=28.5714285714286, Blast_Score=120, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6321563, Length=417, Percent_Identity=29.0167865707434, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6325403, Length=418, Percent_Identity=28.9473684210526, Blast_Score=128, Evalue=3e-30, Organism=Drosophila melanogaster, GI45553209, Length=404, Percent_Identity=30.9405940594059, Blast_Score=160, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 71780; Mature: 71780
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIAGIITGGNPEILQKMVDIQAHRGPDDAGLQWFESANAGLAQRRLSILDLTNAGHQP CCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHEEECCCCCCC MKNARGNRWITFNGEIYNYRELRAELQTKGYQFKSNSDTEVILAAYDEWGASAVNRFNGM HHHCCCCEEEEECCCEECHHHHHHHHHHCCEEECCCCCCEEEEEECCHHCHHHHHHCCCE FAFAIYDTDTRELFLARDHLGIKPLYYAQLGETLLFASEAKALFEYPAMKKEIEPDAVVS EEEEEEECCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHCCCHHHHHH AIMLLWVPEPKTGFKNVFKLPAGHYAIFKNGKLSIQEYWDIPIPETTPTLTPALEAESTA HHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCEEEHEECCCCCCCCCCCCCCCCCCHHHH KLVELLEQTIARQMISDVPVGAFLSGGLDSSLIVALMRKAAPGAKLSTYTIAFTEADKKM HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCHHH EAMPDDAMYARRVAKEFGTEHHELCIEPDSNKHLQKILWHLDDPVADGAAINTYLISKQA HCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEHEEEECCC KDNGTTVLLNGMGGDEVFGGYRKHFASLMIERYQKIPTPLRKGLIEPTVNAMPVAIGGKG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCC IILTRWAKRFLGSASISPLNAYIYGFNYHKPDGLKQILAEHLFQTDFENLYPVRRYFELA EEHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVKHLPLLQKMTYLDTKLFLTGINLLYSDKAMMAASVEGRPPLIDKEIVEFAAYLPSEL HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHHHCCCCE KIKGREQKYLLKKAAESYLPNDIIYRPKAPFGTPLRAWMKTGLKSQMETLFSNNDFPHNH EECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH YLQNAYVLNLLEAHASGKTDNAHALWGAFGVANWINQNEPA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MCGIAGIITGGNPEILQKMVDIQAHRGPDDAGLQWFESANAGLAQRRLSILDLTNAGHQP CCCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHEEECCCCCCC MKNARGNRWITFNGEIYNYRELRAELQTKGYQFKSNSDTEVILAAYDEWGASAVNRFNGM HHHCCCCEEEEECCCEECHHHHHHHHHHCCEEECCCCCCEEEEEECCHHCHHHHHHCCCE FAFAIYDTDTRELFLARDHLGIKPLYYAQLGETLLFASEAKALFEYPAMKKEIEPDAVVS EEEEEEECCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHCCCHHHHHH AIMLLWVPEPKTGFKNVFKLPAGHYAIFKNGKLSIQEYWDIPIPETTPTLTPALEAESTA HHHHHCCCCCCCCHHHHHHCCCCCEEEEECCCEEEHEECCCCCCCCCCCCCCCCCCHHHH KLVELLEQTIARQMISDVPVGAFLSGGLDSSLIVALMRKAAPGAKLSTYTIAFTEADKKM HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCHHH EAMPDDAMYARRVAKEFGTEHHELCIEPDSNKHLQKILWHLDDPVADGAAINTYLISKQA HCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCEEEHEEEECCC KDNGTTVLLNGMGGDEVFGGYRKHFASLMIERYQKIPTPLRKGLIEPTVNAMPVAIGGKG CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCC IILTRWAKRFLGSASISPLNAYIYGFNYHKPDGLKQILAEHLFQTDFENLYPVRRYFELA EEHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVKHLPLLQKMTYLDTKLFLTGINLLYSDKAMMAASVEGRPPLIDKEIVEFAAYLPSEL HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHHHCCCCE KIKGREQKYLLKKAAESYLPNDIIYRPKAPFGTPLRAWMKTGLKSQMETLFSNNDFPHNH EECCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH YLQNAYVLNLLEAHASGKTDNAHALWGAFGVANWINQNEPA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8755891; 10498721 [H]