| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214062
Identifier: 193214062
GI number: 193214062
Start: 394730
End: 395251
Strand: Direct
Name: 193214062
Synonym: Ctha_0343
Alternate gene names: NA
Gene position: 394730-395251 (Clockwise)
Preceding gene: 193214061
Following gene: 193214069
Centisome position: 11.99
GC content: 46.55
Gene sequence:
>522_bases ATGAAAGGGAAATCGCTATCCGATCATTTAAAAACTTACATTGAAGAACGGTTGAAGAAAAAAGGCGATGAGCATGTCAC CGACAGCAGCGTGCTCAAACGCACTTGTTCTGCGGTTGTTTTTACCGGACTGACAACGGGCTCGCTGACGGTTGTCGAAC ATCATCGCTCAAACTCCGCTGACAAAGGCCTTTCCATTCACGACGGCACTTTACGCATTGACCTTTCAGCTTTCCCGGAA CTCAGCAAAACCGATGGATTCCTTTGGATAACGGATTCCGATGTTATTGTTCTAAAAACCAGCCCGAACACGTTTAAAGC CTACACGTCGATTTGCGTGAACTGGCAAAAAAAACAAACCTTCACAGCAGACAATCAGTTGCGCTGCCCTTCAAGCCTGG AATGGGCATTCGACATTCATCATCCTACCGACGAAGAGCACGCGCATTTAACCGAATATCCGATTCGCAGCGACGGGAAT TTTTTATTGATCGAACTGCAAAGCACGGCCAAAAAGTCATAA
Upstream 100 bases:
>100_bases AAAAGTCATTAATTTATTACAGCTATGAAGAAAATTGCTGGGTTAGAAAAGCCTTCATTTTTTTCCCTGTAAGCCTGGTC ACAATCAAAGAAACGAATTT
Downstream 100 bases:
>100_bases CCTTTTTCTCAAAAAAAAAAGGGGCTGCCGTTAGCTCCAATAACGACAACCCCCCGACAGAAGCATGTAGCGAAAAAGCT ACTGAATCAAATTCAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKGKSLSDHLKTYIEERLKKKGDEHVTDSSVLKRTCSAVVFTGLTTGSLTVVEHHRSNSADKGLSIHDGTLRIDLSAFPE LSKTDGFLWITDSDVIVLKTSPNTFKAYTSICVNWQKKQTFTADNQLRCPSSLEWAFDIHHPTDEEHAHLTEYPIRSDGN FLLIELQSTAKKS
Sequences:
>Translated_173_residues MKGKSLSDHLKTYIEERLKKKGDEHVTDSSVLKRTCSAVVFTGLTTGSLTVVEHHRSNSADKGLSIHDGTLRIDLSAFPE LSKTDGFLWITDSDVIVLKTSPNTFKAYTSICVNWQKKQTFTADNQLRCPSSLEWAFDIHHPTDEEHAHLTEYPIRSDGN FLLIELQSTAKKS >Mature_173_residues MKGKSLSDHLKTYIEERLKKKGDEHVTDSSVLKRTCSAVVFTGLTTGSLTVVEHHRSNSADKGLSIHDGTLRIDLSAFPE LSKTDGFLWITDSDVIVLKTSPNTFKAYTSICVNWQKKQTFTADNQLRCPSSLEWAFDIHHPTDEEHAHLTEYPIRSDGN FLLIELQSTAKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19434; Mature: 19434
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKSLSDHLKTYIEERLKKKGDEHVTDSSVLKRTCSAVVFTGLTTGSLTVVEHHRSNSA CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCC DKGLSIHDGTLRIDLSAFPELSKTDGFLWITDSDVIVLKTSPNTFKAYTSICVNWQKKQT CCCCEEECCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCE FTADNQLRCPSSLEWAFDIHHPTDEEHAHLTEYPIRSDGNFLLIELQSTAKKS ECCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MKGKSLSDHLKTYIEERLKKKGDEHVTDSSVLKRTCSAVVFTGLTTGSLTVVEHHRSNSA CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCC DKGLSIHDGTLRIDLSAFPELSKTDGFLWITDSDVIVLKTSPNTFKAYTSICVNWQKKQT CCCCEEECCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCE FTADNQLRCPSSLEWAFDIHHPTDEEHAHLTEYPIRSDGNFLLIELQSTAKKS ECCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA