| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213982
Identifier: 193213982
GI number: 193213982
Start: 307969
End: 308406
Strand: Direct
Name: 193213982
Synonym: Ctha_0263
Alternate gene names: NA
Gene position: 307969-308406 (Clockwise)
Preceding gene: 193213977
Following gene: 193213995
Centisome position: 9.35
GC content: 50.68
Gene sequence:
>438_bases ATGGATGCTTCACTGACTCGTTCCGAGCCATTCAGCATGACAAGACAACGGGCTTTCGGCTACGCTCAGGCCACAGCAAA ATCAACTGTCATTCTGAGGCTTCTTAGCCGAAGAATCCAACTTCACCGGACACATGGATGCTTCACTGACTCGTTCCGAG CCATTCAGCATGACAAGACAACGGGCTTTCGGCTACGCTCAGGCCACAGCAAAATCAACTGTCATTCTGAGTCTCTTGAC GAAGAATCCAACTTCACCGGACACATGGATGCTTCACTGACTCGTTCCGAGCCATTCAGCATGACAAGACAACGGGCTTT CGGCTACGCTCAGGCCACAGCAAAATCAACTGTCATTCTGAGGTTTCTTAGCCGAAGAATCCAACTTCACCGGACACATG GATGCTTCACTGACTCGCCGAAGAGCCATTCAGCATGA
Upstream 100 bases:
>100_bases TTATCACGAGCAAGATTTGCTTTCGGCTACGCTCAGGCCACAGCAAAATCAACTGTCATTCTGAGGTTTCTTAGCCGAAG AATCCAACTTCACCGGACAC
Downstream 100 bases:
>100_bases CAAGAAAAAAAAAGAGCAAACTGTCCACACGCGTGCAAATCGTTTATCGCCACGGCGGTAAATTTTGAGTGACCGTTGTC TCGTCGTCCTCAACGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MDASLTRSEPFSMTRQRAFGYAQATAKSTVILRLLSRRIQLHRTHGCFTDSFRAIQHDKTTGFRLRSGHSKINCHSESLD EESNFTGHMDASLTRSEPFSMTRQRAFGYAQATAKSTVILRFLSRRIQLHRTHGCFTDSPKSHSA
Sequences:
>Translated_145_residues MDASLTRSEPFSMTRQRAFGYAQATAKSTVILRLLSRRIQLHRTHGCFTDSFRAIQHDKTTGFRLRSGHSKINCHSESLD EESNFTGHMDASLTRSEPFSMTRQRAFGYAQATAKSTVILRFLSRRIQLHRTHGCFTDSPKSHSA >Mature_145_residues MDASLTRSEPFSMTRQRAFGYAQATAKSTVILRLLSRRIQLHRTHGCFTDSFRAIQHDKTTGFRLRSGHSKINCHSESLD EESNFTGHMDASLTRSEPFSMTRQRAFGYAQATAKSTVILRFLSRRIQLHRTHGCFTDSPKSHSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16479; Mature: 16479
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDASLTRSEPFSMTRQRAFGYAQATAKSTVILRLLSRRIQLHRTHGCFTDSFRAIQHDKT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC TGFRLRSGHSKINCHSESLDEESNFTGHMDASLTRSEPFSMTRQRAFGYAQATAKSTVIL CCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RFLSRRIQLHRTHGCFTDSPKSHSA HHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDASLTRSEPFSMTRQRAFGYAQATAKSTVILRLLSRRIQLHRTHGCFTDSFRAIQHDKT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC TGFRLRSGHSKINCHSESLDEESNFTGHMDASLTRSEPFSMTRQRAFGYAQATAKSTVIL CCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RFLSRRIQLHRTHGCFTDSPKSHSA HHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA