Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

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The map label for this gene is 193213862

Identifier: 193213862

GI number: 193213862

Start: 166161

End: 166742

Strand: Direct

Name: 193213862

Synonym: Ctha_0143

Alternate gene names: NA

Gene position: 166161-166742 (Clockwise)

Preceding gene: 193213861

Following gene: 193213863

Centisome position: 5.05

GC content: 45.02

Gene sequence:

>582_bases
GTGGCCGGGCAAACCAACATCACCGCCCTAACACGCATTCCGAGTTCATCGGAAGTGCTTTCGATCGATTTTCAAGCCTG
GAAGGAAAAATTCAACAAGTTCATAGAAGAATCAACTTATCAGCCAAAGCTTCTCGGCAAAAAGCGATCACAGGAAAATA
ACCCTGACGCCTCCAAAGAAACACAGCCGGAACGCTTTGCAGAAGAGCACAAACCCATTTTGCCAATTGAAGAAATTAGC
CGCAGATGGGAAAATTTCTTGCTGAGCTTGGAAGAAAAAGGAAATGGGCTACTTGCTTCAAATTTGAAAGTCTGTGAGAT
CAAAGCGCTGAAAGGACGAGAGTTGACATTGCTTTGCAGCAAGGAATTTGCATTTGAGATGCTCTCTGGCGAACTGGCGC
GCTTGTCGGAAGCCATGCAAAACTTTTTCCAAACGCCAATCTACGCCAACCTCACCATCGATAAAGAACTGGTAAAAGCA
ACGACGGAAAAAAGTCCGTACGAGCTATTCCAAGAATTGGCCAAAAAGAATAAGCTGATCAAATATCTCGTCGACGAGTT
TGGCGCGGAGCTCATCTATTAA

Upstream 100 bases:

>100_bases
CAGAATTTGACCAGCGCCTGAAGGCCATCGAAACCGAAATAAAAAAAAAGACTTCCAGATAATTGACGACGAGCCACCGG
CGCACGATACACAGCTGCCG

Downstream 100 bases:

>100_bases
AAGATCAACTCGCTGCTTATCCAATCCGCTTGTTTTCGGCCATTGGCAGCGCGATCCTGTTTCCGGTCCTTTGAACCGGC
TTCACATTTTGCATCTTGTC

Product: hypothetical protein

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Subunits Gamma And Tau; DNA Polymerase III Subunits Gamma/Tau

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKETQPERFAEEHKPILPIEEIS
RRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCSKEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKA
TTEKSPYELFQELAKKNKLIKYLVDEFGAELIY

Sequences:

>Translated_193_residues
MAGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKETQPERFAEEHKPILPIEEIS
RRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCSKEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKA
TTEKSPYELFQELAKKNKLIKYLVDEFGAELIY
>Mature_192_residues
AGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKETQPERFAEEHKPILPIEEISR
RWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCSKEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKAT
TEKSPYELFQELAKKNKLIKYLVDEFGAELIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22188; Mature: 22056

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKE
CCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC
TQPERFAEEHKPILPIEEISRRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCEEEEEEC
KEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKATTEKSPYELFQELAKKNKLI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH
KYLVDEFGAELIY
HHHHHHHHHHCCC
>Mature Secondary Structure 
AGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKE
CCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC
TQPERFAEEHKPILPIEEISRRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCS
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCEEEEEEC
KEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKATTEKSPYELFQELAKKNKLI
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH
KYLVDEFGAELIY
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA