| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213862
Identifier: 193213862
GI number: 193213862
Start: 166161
End: 166742
Strand: Direct
Name: 193213862
Synonym: Ctha_0143
Alternate gene names: NA
Gene position: 166161-166742 (Clockwise)
Preceding gene: 193213861
Following gene: 193213863
Centisome position: 5.05
GC content: 45.02
Gene sequence:
>582_bases GTGGCCGGGCAAACCAACATCACCGCCCTAACACGCATTCCGAGTTCATCGGAAGTGCTTTCGATCGATTTTCAAGCCTG GAAGGAAAAATTCAACAAGTTCATAGAAGAATCAACTTATCAGCCAAAGCTTCTCGGCAAAAAGCGATCACAGGAAAATA ACCCTGACGCCTCCAAAGAAACACAGCCGGAACGCTTTGCAGAAGAGCACAAACCCATTTTGCCAATTGAAGAAATTAGC CGCAGATGGGAAAATTTCTTGCTGAGCTTGGAAGAAAAAGGAAATGGGCTACTTGCTTCAAATTTGAAAGTCTGTGAGAT CAAAGCGCTGAAAGGACGAGAGTTGACATTGCTTTGCAGCAAGGAATTTGCATTTGAGATGCTCTCTGGCGAACTGGCGC GCTTGTCGGAAGCCATGCAAAACTTTTTCCAAACGCCAATCTACGCCAACCTCACCATCGATAAAGAACTGGTAAAAGCA ACGACGGAAAAAAGTCCGTACGAGCTATTCCAAGAATTGGCCAAAAAGAATAAGCTGATCAAATATCTCGTCGACGAGTT TGGCGCGGAGCTCATCTATTAA
Upstream 100 bases:
>100_bases CAGAATTTGACCAGCGCCTGAAGGCCATCGAAACCGAAATAAAAAAAAAGACTTCCAGATAATTGACGACGAGCCACCGG CGCACGATACACAGCTGCCG
Downstream 100 bases:
>100_bases AAGATCAACTCGCTGCTTATCCAATCCGCTTGTTTTCGGCCATTGGCAGCGCGATCCTGTTTCCGGTCCTTTGAACCGGC TTCACATTTTGCATCTTGTC
Product: hypothetical protein
Products: diphosphate; DNAn+1
Alternate protein names: DNA Polymerase III Subunits Gamma And Tau; DNA Polymerase III Subunits Gamma/Tau
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKETQPERFAEEHKPILPIEEIS RRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCSKEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKA TTEKSPYELFQELAKKNKLIKYLVDEFGAELIY
Sequences:
>Translated_193_residues MAGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKETQPERFAEEHKPILPIEEIS RRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCSKEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKA TTEKSPYELFQELAKKNKLIKYLVDEFGAELIY >Mature_192_residues AGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKETQPERFAEEHKPILPIEEISR RWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCSKEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKAT TEKSPYELFQELAKKNKLIKYLVDEFGAELIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.7
Molecular weight: Translated: 22188; Mature: 22056
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKE CCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC TQPERFAEEHKPILPIEEISRRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCS CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCEEEEEEC KEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKATTEKSPYELFQELAKKNKLI HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH KYLVDEFGAELIY HHHHHHHHHHCCC >Mature Secondary Structure AGQTNITALTRIPSSSEVLSIDFQAWKEKFNKFIEESTYQPKLLGKKRSQENNPDASKE CCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCC TQPERFAEEHKPILPIEEISRRWENFLLSLEEKGNGLLASNLKVCEIKALKGRELTLLCS CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCEEEEEEC KEFAFEMLSGELARLSEAMQNFFQTPIYANLTIDKELVKATTEKSPYELFQELAKKNKLI HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHH KYLVDEFGAELIY HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxynucleoside triphosphate; DNAn
Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA