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The map label for this gene is 193213617

Identifier: 193213617

GI number: 193213617

Start: 2184126

End: 2185547

Strand: Direct

Name: 193213617

Synonym: Cpar_1981

Alternate gene names: NA

Gene position: 2184126-2185547 (Clockwise)

Preceding gene: 193213616

Following gene: 193213618

Centisome position: 95.41

GC content: 61.53

Gene sequence:

>1422_bases
ATGGCAATGAACAAACAGGTTGCGCTGGTCTTTCTGGCCTCCGAAGGCGGCGTTGATGGAGCAAAGTCGATCTACGGTGA
CGCCGAGCCATCCAGTCTGAAGCGGTTGCTCGACAAGGGCATCGGAAGTCTCATCAAGCGGACGCAGTTCGCCATTCCCC
CGTTGGCCCTGATGATTCTCGCCTCGATCGAAGTACCCGGCGTGGAGCAGACCATCTGCGATCTCCGCTTCGAGGAGTTC
CCCTTTGACCGCAAGTGGGACCTGGTCGGCATCAGCGTCCAGACCGGCATGGTTGCCAAGGCATTCGAGCTGGCCGACCG
CCTGCGAAAGCACGGTATTCCGGTAGTTCTCGGCGGGCCGCACGTCACCATGTTCCCCGACTCATGCCGACCTCATGCCG
ACTCACTCGTGCACGGCGAAGCGGACGACCTCTGGGCCGACGTGCTCCGAGACCTGACCGCCGGAACACTGAAACCGGAG
TACCGCGCCGACACCGTTCCCGACCTTTCGCTCCACCGCCCGGTCAGCCGCGCATCCCTGAAACAGAGTCGCTACTTCAC
CACCAACCTCGTGCAAACCGGCCGCGGTTGCCCCTATCAGTGCGACTTCTGCAACGTGCACGTGCTCAACGGCCGCGTGC
TCCGTCAGCGGAAAATCGAACACATCGTCGATGAGGTGCGTCGCTTCAGTCGCGACGACAAGCGCATTTTCTTTTTCGTT
GACGACTCCATCAACGGCGATCCGCTCTTCGCGCAGGAGCTGTTCAGCAAGCTGATTCCCCTCAACATCTCCTGGTTCGG
CCAGGCGACCACGGCGCTCGGCCAGCAACCGGAACTGCTCGACACCTTCGCCCGCTCCGGCTGCCGGGCGCTCCTCGTCG
GCATCGAAAGCATCGAACCGTCGAGTCGTAGCGCACACCGCAAAACGCAAAACCGCACGGAAGAGCTGGCGGGCAACATC
CGCGCGATCCGACAGAGCGGCATCTGTCTTTACGGAAGCTTCATCTACGGCCTCGACGGCGACACGCTCGCCACCCCCGC
AGCCATTCTCGACTTCATCCAGGAAACCCGGCTCGACGTGCCCGGCATCAACACCTTGCGCCCCATTCCCGGCACGAAAG
TGTTCGATCGGCTCCGGGAGGAGGGTCGGTTGCTCTTCGACGCCGACGACCTGACGGCGTTCCGTTACACCTTCGGTCAG
GAGATGCTCTATCGCCCGAAAAACATCCCGCTACCGGAGTTCATCGAAAGCTACTCCGAGCTGACCCGCAAAGTGTTCAA
CATTGGCAACGCCATCCGGCGGGGCATCGACGCGCCGGGCATCAACGCCGCCGTGCTCTTCTTCAACCTCTTCTACACGC
ACCTTTATCGCCTGTCGAGAAATGACCTGCGAAAGCAACTCGAAATCCTGCGCAGCGCGTGA

Upstream 100 bases:

>100_bases
GCAGCAGGCCTTCCTCGAAGCTTAAGCACCAGAGTCGAACGTTCGTTCTCCGGCGCACATTTGCCGGAGAACCGCTCACG
AGAAAAACAGAGGTGCCCTG

Downstream 100 bases:

>100_bases
CGGAGGTCGCTTACGGAAATGACGTCACTTATCAATCTCACAAACAAAACGATAATGCGACACAAAAAACGATGCTGAAC
ATTTTGAGCGGCGATGGATT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MAMNKQVALVFLASEGGVDGAKSIYGDAEPSSLKRLLDKGIGSLIKRTQFAIPPLALMILASIEVPGVEQTICDLRFEEF
PFDRKWDLVGISVQTGMVAKAFELADRLRKHGIPVVLGGPHVTMFPDSCRPHADSLVHGEADDLWADVLRDLTAGTLKPE
YRADTVPDLSLHRPVSRASLKQSRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIEHIVDEVRRFSRDDKRIFFFV
DDSINGDPLFAQELFSKLIPLNISWFGQATTALGQQPELLDTFARSGCRALLVGIESIEPSSRSAHRKTQNRTEELAGNI
RAIRQSGICLYGSFIYGLDGDTLATPAAILDFIQETRLDVPGINTLRPIPGTKVFDRLREEGRLLFDADDLTAFRYTFGQ
EMLYRPKNIPLPEFIESYSELTRKVFNIGNAIRRGIDAPGINAAVLFFNLFYTHLYRLSRNDLRKQLEILRSA

Sequences:

>Translated_473_residues
MAMNKQVALVFLASEGGVDGAKSIYGDAEPSSLKRLLDKGIGSLIKRTQFAIPPLALMILASIEVPGVEQTICDLRFEEF
PFDRKWDLVGISVQTGMVAKAFELADRLRKHGIPVVLGGPHVTMFPDSCRPHADSLVHGEADDLWADVLRDLTAGTLKPE
YRADTVPDLSLHRPVSRASLKQSRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIEHIVDEVRRFSRDDKRIFFFV
DDSINGDPLFAQELFSKLIPLNISWFGQATTALGQQPELLDTFARSGCRALLVGIESIEPSSRSAHRKTQNRTEELAGNI
RAIRQSGICLYGSFIYGLDGDTLATPAAILDFIQETRLDVPGINTLRPIPGTKVFDRLREEGRLLFDADDLTAFRYTFGQ
EMLYRPKNIPLPEFIESYSELTRKVFNIGNAIRRGIDAPGINAAVLFFNLFYTHLYRLSRNDLRKQLEILRSA
>Mature_472_residues
AMNKQVALVFLASEGGVDGAKSIYGDAEPSSLKRLLDKGIGSLIKRTQFAIPPLALMILASIEVPGVEQTICDLRFEEFP
FDRKWDLVGISVQTGMVAKAFELADRLRKHGIPVVLGGPHVTMFPDSCRPHADSLVHGEADDLWADVLRDLTAGTLKPEY
RADTVPDLSLHRPVSRASLKQSRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIEHIVDEVRRFSRDDKRIFFFVD
DSINGDPLFAQELFSKLIPLNISWFGQATTALGQQPELLDTFARSGCRALLVGIESIEPSSRSAHRKTQNRTEELAGNIR
AIRQSGICLYGSFIYGLDGDTLATPAAILDFIQETRLDVPGINTLRPIPGTKVFDRLREEGRLLFDADDLTAFRYTFGQE
MLYRPKNIPLPEFIESYSELTRKVFNIGNAIRRGIDAPGINAAVLFFNLFYTHLYRLSRNDLRKQLEILRSA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53105; Mature: 52973

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMNKQVALVFLASEGGVDGAKSIYGDAEPSSLKRLLDKGIGSLIKRTQFAIPPLALMIL
CCCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASIEVPGVEQTICDLRFEEFPFDRKWDLVGISVQTGMVAKAFELADRLRKHGIPVVLGGP
HHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEECCC
HVTMFPDSCRPHADSLVHGEADDLWADVLRDLTAGTLKPEYRADTVPDLSLHRPVSRASL
EEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHH
KQSRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIEHIVDEVRRFSRDDKRIFFFV
HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DDSINGDPLFAQELFSKLIPLNISWFGQATTALGQQPELLDTFARSGCRALLVGIESIEP
ECCCCCCCCHHHHHHHHHCCCCEEECCHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHCCC
SSRSAHRKTQNRTEELAGNIRAIRQSGICLYGSFIYGLDGDTLATPAAILDFIQETRLDV
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
PGINTLRPIPGTKVFDRLREEGRLLFDADDLTAFRYTFGQEMLYRPKNIPLPEFIESYSE
CCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LTRKVFNIGNAIRRGIDAPGINAAVLFFNLFYTHLYRLSRNDLRKQLEILRSA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AMNKQVALVFLASEGGVDGAKSIYGDAEPSSLKRLLDKGIGSLIKRTQFAIPPLALMIL
CCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASIEVPGVEQTICDLRFEEFPFDRKWDLVGISVQTGMVAKAFELADRLRKHGIPVVLGGP
HHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEECCC
HVTMFPDSCRPHADSLVHGEADDLWADVLRDLTAGTLKPEYRADTVPDLSLHRPVSRASL
EEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHH
KQSRYFTTNLVQTGRGCPYQCDFCNVHVLNGRVLRQRKIEHIVDEVRRFSRDDKRIFFFV
HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DDSINGDPLFAQELFSKLIPLNISWFGQATTALGQQPELLDTFARSGCRALLVGIESIEP
ECCCCCCCCHHHHHHHHHCCCCEEECCHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHCCC
SSRSAHRKTQNRTEELAGNIRAIRQSGICLYGSFIYGLDGDTLATPAAILDFIQETRLDV
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCC
PGINTLRPIPGTKVFDRLREEGRLLFDADDLTAFRYTFGQEMLYRPKNIPLPEFIESYSE
CCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LTRKVFNIGNAIRRGIDAPGINAAVLFFNLFYTHLYRLSRNDLRKQLEILRSA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]