| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is fur [H]
Identifier: 193213196
GI number: 193213196
Start: 1697807
End: 1698340
Strand: Direct
Name: fur [H]
Synonym: Cpar_1551
Alternate gene names: 193213196
Gene position: 1697807-1698340 (Clockwise)
Preceding gene: 193213191
Following gene: 193213197
Centisome position: 74.16
GC content: 58.24
Gene sequence:
>534_bases TTGGAAAAATTGAAAACACGAAATACTGACAGCAAGAACATCGTGAAACAAACGGGCAGCGACACGATCGCGAAGGTCGA AGCGCTTTTCAAATCGTACATGAAGGAGGAGGGGCTCCGGTGCACCCAGGAGCGCCTGAGCGTGCTGCGGGAAATCTACC GCTCCAACACGCACCTCGACGCCGACGAGCTGTTTGTCCGGCTTCGCGAGCAAGGCGTGGGCATCTCGCGCGCCACGGTT TATCACACCCTCGATCTGCTGTTCCGGTACAACCTCGTCACCAAGATCGACCTCGGCCACAAGCACACGCACTACGAAAA ATCGTGGGGTGTCGCCGACCACCTGCACATCATCTGCCTCAAGTGCGGCAAGGTTTCGGAGGCCACGAGCACGGAACTTG CCGGCATGATGGAAAAGCTCTGCACCGAGCACGGATACTCGCTCGGCAGCTTCAGCCTGCAGCTCTTCGGCGAGTGCATT GACAAGGAGGCCTGCGTCCGGAGGGTCGACGAGAAACACAACGAGAACGCCTGA
Upstream 100 bases:
>100_bases AATAGTCGTCTAATGTACGGTTTTCAGCGCTCTTTTCCGTCCGGCTCTTCCCGCTCCGCCGCCTTCATGGTTCACAGGGA ATTCGCAGAAAAACAATACA
Downstream 100 bases:
>100_bases ACTCACGGACACCATGCCCTGGCTCTACCTCATCCTCGCCATCGTCGCCGAAGTCTCCGGCACCACCAGCATGAAGCTCT CGGAGGGCTTCACCAAACCG
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MEKLKTRNTDSKNIVKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREIYRSNTHLDADELFVRLREQGVGISRATV YHTLDLLFRYNLVTKIDLGHKHTHYEKSWGVADHLHIICLKCGKVSEATSTELAGMMEKLCTEHGYSLGSFSLQLFGECI DKEACVRRVDEKHNENA
Sequences:
>Translated_177_residues MEKLKTRNTDSKNIVKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREIYRSNTHLDADELFVRLREQGVGISRATV YHTLDLLFRYNLVTKIDLGHKHTHYEKSWGVADHLHIICLKCGKVSEATSTELAGMMEKLCTEHGYSLGSFSLQLFGECI DKEACVRRVDEKHNENA >Mature_177_residues MEKLKTRNTDSKNIVKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREIYRSNTHLDADELFVRLREQGVGISRATV YHTLDLLFRYNLVTKIDLGHKHTHYEKSWGVADHLHIICLKCGKVSEATSTELAGMMEKLCTEHGYSLGSFSLQLFGECI DKEACVRRVDEKHNENA
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=127, Percent_Identity=32.2834645669291, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 20251; Mature: 20251
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLKTRNTDSKNIVKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREIYRSNTHLD CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC ADELFVRLREQGVGISRATVYHTLDLLFRYNLVTKIDLGHKHTHYEKSWGVADHLHIICL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHCCHHHHHHHHHH KCGKVSEATSTELAGMMEKLCTEHGYSLGSFSLQLFGECIDKEACVRRVDEKHNENA HCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKLKTRNTDSKNIVKQTGSDTIAKVEALFKSYMKEEGLRCTQERLSVLREIYRSNTHLD CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC ADELFVRLREQGVGISRATVYHTLDLLFRYNLVTKIDLGHKHTHYEKSWGVADHLHIICL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHCCHHHHHHHHHH KCGKVSEATSTELAGMMEKLCTEHGYSLGSFSLQLFGECIDKEACVRRVDEKHNENA HCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]