| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213182
Identifier: 193213182
GI number: 193213182
Start: 1683012
End: 1683545
Strand: Direct
Name: 193213182
Synonym: Cpar_1537
Alternate gene names: NA
Gene position: 1683012-1683545 (Clockwise)
Preceding gene: 193213181
Following gene: 193213185
Centisome position: 73.52
GC content: 53.0
Gene sequence:
>534_bases ATGGCACGCACTCCCGAACAACTGGCAAAGCTCCTGCAGCGCGAAATTCTCATCGATCTGGAGTGGTTGCCGAATGGCGT GATCGGAGCAAAAGGCAGTGTGTTCATCGAAGCTGATCCGTCGATTGTATGGCTGATGCTCAGCGATTACAATCGTCTGC ACGAAACAATGCCCAAAGTCGTTGCCAGCAAGCTGGTGGAGGAAAACAACCACACCAAAGTCATCGACCAGTCGGGAAAG TCAGGAATTTTCATTTTCGAAAGGATGGTGCATTTCACTCTCAAGGTCGAGGAGATCTATCCGGAGCACCTCTACTTTTC GCAGATCAGCGGAGATTTTGAGGTCTATGAAGGAGAGTGGCAGCTTGAAGCGGTTGACGGAAACAACGGGCCGGGCACGA TGCTAACCTACCAGGCGGAGGTCAAGCCCAGCTTTTTCGCGCCCCAGTTCGTGGTAAGCTTCGTACAGAGCCAGGATCTG CCGACCATTCTGAAGGAGGTTCGGCGCTACTGCGAGTCTCAGGCCAAAAGCTGA
Upstream 100 bases:
>100_bases TGAGCAATCGCTCTTTGCGGCTGAAATGAAAGTAACCTACATTGTAGCTATAGCTTTAGCGCACTCCTGACCCCCTGGCA ATACGAAAACCCTTTCATCG
Downstream 100 bases:
>100_bases ACTTACGACCTGATAATCCAGTACAGCTCGCCGCCCTGACGCACCTTTTCGAAGCGTCCCGATGAGAAAAGCTCCGCCAT CGCCTGTTCCACCTTTGCGC
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MARTPEQLAKLLQREILIDLEWLPNGVIGAKGSVFIEADPSIVWLMLSDYNRLHETMPKVVASKLVEENNHTKVIDQSGK SGIFIFERMVHFTLKVEEIYPEHLYFSQISGDFEVYEGEWQLEAVDGNNGPGTMLTYQAEVKPSFFAPQFVVSFVQSQDL PTILKEVRRYCESQAKS
Sequences:
>Translated_177_residues MARTPEQLAKLLQREILIDLEWLPNGVIGAKGSVFIEADPSIVWLMLSDYNRLHETMPKVVASKLVEENNHTKVIDQSGK SGIFIFERMVHFTLKVEEIYPEHLYFSQISGDFEVYEGEWQLEAVDGNNGPGTMLTYQAEVKPSFFAPQFVVSFVQSQDL PTILKEVRRYCESQAKS >Mature_176_residues ARTPEQLAKLLQREILIDLEWLPNGVIGAKGSVFIEADPSIVWLMLSDYNRLHETMPKVVASKLVEENNHTKVIDQSGKS GIFIFERMVHFTLKVEEIYPEHLYFSQISGDFEVYEGEWQLEAVDGNNGPGTMLTYQAEVKPSFFAPQFVVSFVQSQDLP TILKEVRRYCESQAKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20215; Mature: 20084
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTPEQLAKLLQREILIDLEWLPNGVIGAKGSVFIEADPSIVWLMLSDYNRLHETMPKV CCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHH VASKLVEENNHTKVIDQSGKSGIFIFERMVHFTLKVEEIYPEHLYFSQISGDFEVYEGEW HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECEE QLEAVDGNNGPGTMLTYQAEVKPSFFAPQFVVSFVQSQDLPTILKEVRRYCESQAKS EEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARTPEQLAKLLQREILIDLEWLPNGVIGAKGSVFIEADPSIVWLMLSDYNRLHETMPKV CCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHH VASKLVEENNHTKVIDQSGKSGIFIFERMVHFTLKVEEIYPEHLYFSQISGDFEVYEGEW HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECEE QLEAVDGNNGPGTMLTYQAEVKPSFFAPQFVVSFVQSQDLPTILKEVRRYCESQAKS EEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA