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The map label for this gene is ytfL [C]

Identifier: 193213178

GI number: 193213178

Start: 1678668

End: 1679984

Strand: Direct

Name: ytfL [C]

Synonym: Cpar_1533

Alternate gene names: 193213178

Gene position: 1678668-1679984 (Clockwise)

Preceding gene: 193213177

Following gene: 193213179

Centisome position: 73.33

GC content: 59.53

Gene sequence:

>1317_bases
ATGGAAATCCTTTTTCTCTTTTTCCTTCTCATTCTCCTCAATGGCCTGTTCGCCATGTCGGAGATGGCTCTTATTACAGC
AAAACGCTCCCGCCTTGCCAAGCTGGTCGAAAACGGCGACAAGGCGGCGGAGGTTGCCATGCGGCTCGGGCAGGAGCCAA
CGCGCTTTCTCTCCACCATACAAATCGGCCTCACCATCATCGGCGTGCTGAACGGTATCATCGGTGAATCGTCGTTTACG
CCGCCATTGACCGCCCTGCTCGAATCGTACGGCATGAGCCCCGAAACAAGCCCTATCGTTTCAACCACGCTGGTCGTTTT
CGTCATTACCTACATCACCATTGTCATCGGCGAGCTGGTGCCCAAGCGGCTCGGCCAGTCCAATCCGGAAAACGTCGCCC
GTATCGTCGCACGCCCAATGCATCTCTTGGCTTCCGCGACCCGGCCATTTGTGAAGCTGCTTTCGGTTTCGACCGACGCC
CTGCTACGCCTGATGGGCAAGCAGGTGAATGACCACCCCAGCGTCACCGAGGAGGAAATTCACGCCCTGCTCGAAGAGGG
CTCCGTGGCCGGCATCATCGAGCAGCAGGAGCACGAGATGGTGCGCAACGTGTTCCGCCTCGACGACCGGCAGCTCGGTT
CGCTGATGGTGCCGCGCGCGGACATCATCTATCTCGACACGGCGCTCACCGTCGAGGAAAACATGCAGCGCGTCGGCGAG
TCAGAGCATTCGCGCTTCCCGGTATGCCATAACGGTTTGCAGTCGCTGCTCGGCGTGGTCAATGCCAAACAGCTGCTCGC
CCAGACCATCAAGGGCGGCGTCATCGACCTGGCAACTCACCTGCAACCGTGCGTCTATGTGCCCGAAACGCTGACCGGCA
TGGAGCTGCTCGACCACTTCAGAACGTCAGGCACGCAGATGGTGTTCGTCGTCGATGAGTACGGTGAAATCCAGGGCCTC
GTAACCTTGCAGGACCTGCTCGAAGCGGTCACGGGTGAGTTCGTGCCGCACAACCTCGAAGACTCGTGGGCCGTGCAGCG
CGAAGACGGCTCGTGGCTACTCGACGGTCTCATTCCGGTTCCGGAACTGAAAGACAAGCTCGATCTGAAGTATGTGCCCG
AAGAGGAGAAGGGGGTCTACCACACTCTGAGCGGCATGGTGATGTGGCTGCTCGGACGCATGCCGCAGACCGGCGACATC
ACCTTCTGGGAGAACTGGCGGCTCGAAGTGGTTGACATGGACAGCAAACGCATCGACAAGGTGCTCGCCACCAAAATCGA
CGAACAGCCAGCCGAAGCGCCCAAGCCCGCCAACTGA

Upstream 100 bases:

>100_bases
ACCTGAAACCCTTTTTTATAATATCCCGCCGATAACGTATTATGCGGTACGCGTATCCATTCTCTGGAACGGATACAGTT
CTTGCACTTAACCAACATCC

Downstream 100 bases:

>100_bases
TCACCGAAAAGCGTCATATTGCCACATCCGAAGGTTATCAGTAGATTTGTTTCTACGGATAACCTTTGTTGACCTTTCCA
CGCCCACACGATTTCAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MEILFLFFLLILLNGLFAMSEMALITAKRSRLAKLVENGDKAAEVAMRLGQEPTRFLSTIQIGLTIIGVLNGIIGESSFT
PPLTALLESYGMSPETSPIVSTTLVVFVITYITIVIGELVPKRLGQSNPENVARIVARPMHLLASATRPFVKLLSVSTDA
LLRLMGKQVNDHPSVTEEEIHALLEEGSVAGIIEQQEHEMVRNVFRLDDRQLGSLMVPRADIIYLDTALTVEENMQRVGE
SEHSRFPVCHNGLQSLLGVVNAKQLLAQTIKGGVIDLATHLQPCVYVPETLTGMELLDHFRTSGTQMVFVVDEYGEIQGL
VTLQDLLEAVTGEFVPHNLEDSWAVQREDGSWLLDGLIPVPELKDKLDLKYVPEEEKGVYHTLSGMVMWLLGRMPQTGDI
TFWENWRLEVVDMDSKRIDKVLATKIDEQPAEAPKPAN

Sequences:

>Translated_438_residues
MEILFLFFLLILLNGLFAMSEMALITAKRSRLAKLVENGDKAAEVAMRLGQEPTRFLSTIQIGLTIIGVLNGIIGESSFT
PPLTALLESYGMSPETSPIVSTTLVVFVITYITIVIGELVPKRLGQSNPENVARIVARPMHLLASATRPFVKLLSVSTDA
LLRLMGKQVNDHPSVTEEEIHALLEEGSVAGIIEQQEHEMVRNVFRLDDRQLGSLMVPRADIIYLDTALTVEENMQRVGE
SEHSRFPVCHNGLQSLLGVVNAKQLLAQTIKGGVIDLATHLQPCVYVPETLTGMELLDHFRTSGTQMVFVVDEYGEIQGL
VTLQDLLEAVTGEFVPHNLEDSWAVQREDGSWLLDGLIPVPELKDKLDLKYVPEEEKGVYHTLSGMVMWLLGRMPQTGDI
TFWENWRLEVVDMDSKRIDKVLATKIDEQPAEAPKPAN
>Mature_438_residues
MEILFLFFLLILLNGLFAMSEMALITAKRSRLAKLVENGDKAAEVAMRLGQEPTRFLSTIQIGLTIIGVLNGIIGESSFT
PPLTALLESYGMSPETSPIVSTTLVVFVITYITIVIGELVPKRLGQSNPENVARIVARPMHLLASATRPFVKLLSVSTDA
LLRLMGKQVNDHPSVTEEEIHALLEEGSVAGIIEQQEHEMVRNVFRLDDRQLGSLMVPRADIIYLDTALTVEENMQRVGE
SEHSRFPVCHNGLQSLLGVVNAKQLLAQTIKGGVIDLATHLQPCVYVPETLTGMELLDHFRTSGTQMVFVVDEYGEIQGL
VTLQDLLEAVTGEFVPHNLEDSWAVQREDGSWLLDGLIPVPELKDKLDLKYVPEEEKGVYHTLSGMVMWLLGRMPQTGDI
TFWENWRLEVVDMDSKRIDKVLATKIDEQPAEAPKPAN

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=368, Percent_Identity=24.4565217391304, Blast_Score=161, Evalue=1e-39,
Organism=Escherichia coli, GI1790664, Length=435, Percent_Identity=31.4942528735632, Blast_Score=261, Evalue=5e-71,
Organism=Escherichia coli, GI87082033, Length=273, Percent_Identity=33.3333333333333, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI1788119, Length=345, Percent_Identity=30.1449275362319, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI145693175, Length=417, Percent_Identity=24.9400479616307, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786879, Length=264, Percent_Identity=27.6515151515151, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48643; Mature: 48643

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILFLFFLLILLNGLFAMSEMALITAKRSRLAKLVENGDKAAEVAMRLGQEPTRFLSTI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
QIGLTIIGVLNGIIGESSFTPPLTALLESYGMSPETSPIVSTTLVVFVITYITIVIGELV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PKRLGQSNPENVARIVARPMHLLASATRPFVKLLSVSTDALLRLMGKQVNDHPSVTEEEI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHH
HALLEEGSVAGIIEQQEHEMVRNVFRLDDRQLGSLMVPRADIIYLDTALTVEENMQRVGE
HHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHCCEECCCCCEEEEECHHHHHHHHHHHCC
SEHSRFPVCHNGLQSLLGVVNAKQLLAQTIKGGVIDLATHLQPCVYVPETLTGMELLDHF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCHHHHHHHHHHH
RTSGTQMVFVVDEYGEIQGLVTLQDLLEAVTGEFVPHNLEDSWAVQREDGSWLLDGLIPV
HCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCC
PELKDKLDLKYVPEEEKGVYHTLSGMVMWLLGRMPQTGDITFWENWRLEVVDMDSKRIDK
CCHHHCCCCEECCCHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCHHHHHH
VLATKIDEQPAEAPKPAN
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEILFLFFLLILLNGLFAMSEMALITAKRSRLAKLVENGDKAAEVAMRLGQEPTRFLSTI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
QIGLTIIGVLNGIIGESSFTPPLTALLESYGMSPETSPIVSTTLVVFVITYITIVIGELV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PKRLGQSNPENVARIVARPMHLLASATRPFVKLLSVSTDALLRLMGKQVNDHPSVTEEEI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHH
HALLEEGSVAGIIEQQEHEMVRNVFRLDDRQLGSLMVPRADIIYLDTALTVEENMQRVGE
HHHHHCCCEEEHHHHHHHHHHHHHHHCCCHHHCCEECCCCCEEEEECHHHHHHHHHHHCC
SEHSRFPVCHNGLQSLLGVVNAKQLLAQTIKGGVIDLATHLQPCVYVPETLTGMELLDHF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCHHHHHHHHHHH
RTSGTQMVFVVDEYGEIQGLVTLQDLLEAVTGEFVPHNLEDSWAVQREDGSWLLDGLIPV
HCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCC
PELKDKLDLKYVPEEEKGVYHTLSGMVMWLLGRMPQTGDITFWENWRLEVVDMDSKRIDK
CCHHHCCCCEECCCHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEECCHHHHHH
VLATKIDEQPAEAPKPAN
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]