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The map label for this gene is spr [H]

Identifier: 193212744

GI number: 193212744

Start: 1202857

End: 1203543

Strand: Direct

Name: spr [H]

Synonym: Cpar_1089

Alternate gene names: 193212744

Gene position: 1202857-1203543 (Clockwise)

Preceding gene: 193212743

Following gene: 193212745

Centisome position: 52.54

GC content: 52.98

Gene sequence:

>687_bases
ATGGTCGTATCGTTCAATTTATATGTCAGGACAAAGGCACTGAACACCCATTACCGGTATATGCGAGCAGAACATCTCTT
CCGGCCAACCATGCCAATCATGAAACCTCTGGCATGTAGTTTTGTTCTCCTTCTCTCTTTGCTTCAAAGCCCTTCCTCGC
TGAAGGCTGCCGAACCGACTGCTGAAATACCGGAAACCTGCCTTCCTGTGACGGCCATCTCCATGCAGGAAGAGCCATCG
GCTTCGACAGCAAAAAATTTCTTCACCGACCTCAAAAAGTACTTCGGCATCCGATACCGCTTCGGAGGCGACTCCCCTGC
AGGGTTCGATTGCTCGGGCTTCGTGCGCTTCATGTTCAGCAAAGAGCTGAATATTGAATTGCCGCACTCGTCGAGAGCAA
TGTCGGCAATGGGCATCCAGATTGATCGCAGCGAGTTGCGCCCCGGCGACCTGGTGTTTTTCAAAAACTCAGGCGATCGC
ATCAACCACGTCGGCATCTTCATCGGAAACGATACCTTCATTCACGCCTCGCTTTCCAGAGGCATCGCCCTCGACAGACT
CTCTTCAGGCTATTTCCTCAAGCGGTACGCAACGGCTGTGCGCATTGTCGACCTGCCGGAGAGCCAACATCCTCAGAACG
TAGACCTTCATTCCGACGCCATTGACGAGACCGGCTCACCATCGTGA

Upstream 100 bases:

>100_bases
AGCAGCAGATCAGAAAAAAGATTCGCGATAAACGTCAAAACCAGCAAAAAACGCAGGATACCACAGAAAAGGGCGACAAG
CCGTAAGGTTATTTCACAAA

Downstream 100 bases:

>100_bases
GCTTGGCTTCTGCCAAAAACTCTCCGCAAAAACTCCCAAGGGCTAATCGCCAGGTGTTTTGATCGGTAAGAAATAGGTAT
ATTAACCCCCTGAAATCGTA

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVVSFNLYVRTKALNTHYRYMRAEHLFRPTMPIMKPLACSFVLLLSLLQSPSSLKAAEPTAEIPETCLPVTAISMQEEPS
ASTAKNFFTDLKKYFGIRYRFGGDSPAGFDCSGFVRFMFSKELNIELPHSSRAMSAMGIQIDRSELRPGDLVFFKNSGDR
INHVGIFIGNDTFIHASLSRGIALDRLSSGYFLKRYATAVRIVDLPESQHPQNVDLHSDAIDETGSPS

Sequences:

>Translated_228_residues
MVVSFNLYVRTKALNTHYRYMRAEHLFRPTMPIMKPLACSFVLLLSLLQSPSSLKAAEPTAEIPETCLPVTAISMQEEPS
ASTAKNFFTDLKKYFGIRYRFGGDSPAGFDCSGFVRFMFSKELNIELPHSSRAMSAMGIQIDRSELRPGDLVFFKNSGDR
INHVGIFIGNDTFIHASLSRGIALDRLSSGYFLKRYATAVRIVDLPESQHPQNVDLHSDAIDETGSPS
>Mature_228_residues
MVVSFNLYVRTKALNTHYRYMRAEHLFRPTMPIMKPLACSFVLLLSLLQSPSSLKAAEPTAEIPETCLPVTAISMQEEPS
ASTAKNFFTDLKKYFGIRYRFGGDSPAGFDCSGFVRFMFSKELNIELPHSSRAMSAMGIQIDRSELRPGDLVFFKNSGDR
INHVGIFIGNDTFIHASLSRGIALDRLSSGYFLKRYATAVRIVDLPESQHPQNVDLHSDAIDETGSPS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=110, Percent_Identity=44.5454545454545, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1788001, Length=152, Percent_Identity=36.1842105263158, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787944, Length=118, Percent_Identity=37.2881355932203, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 25448; Mature: 25448

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVSFNLYVRTKALNTHYRYMRAEHLFRPTMPIMKPLACSFVLLLSLLQSPSSLKAAEPT
CEEEEEEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AEIPETCLPVTAISMQEEPSASTAKNFFTDLKKYFGIRYRFGGDSPAGFDCSGFVRFMFS
CCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHEEC
KELNIELPHSSRAMSAMGIQIDRSELRPGDLVFFKNSGDRINHVGIFIGNDTFIHASLSR
CCCEEECCCCCCHHHHHCEEEEHHHCCCCCEEEECCCCCEEEEEEEEECCCEEEEEEHHC
GIALDRLSSGYFLKRYATAVRIVDLPESQHPQNVDLHSDAIDETGSPS
CEEEECCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVVSFNLYVRTKALNTHYRYMRAEHLFRPTMPIMKPLACSFVLLLSLLQSPSSLKAAEPT
CEEEEEEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AEIPETCLPVTAISMQEEPSASTAKNFFTDLKKYFGIRYRFGGDSPAGFDCSGFVRFMFS
CCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHEEC
KELNIELPHSSRAMSAMGIQIDRSELRPGDLVFFKNSGDRINHVGIFIGNDTFIHASLSR
CCCEEECCCCCCHHHHHCEEEEHHHCCCCCEEEECCCCCEEEEEEEEECCCEEEEEEHHC
GIALDRLSSGYFLKRYATAVRIVDLPESQHPQNVDLHSDAIDETGSPS
CEEEECCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]